RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 FBXO22Q8NEZ5 403 aa17.54■□□□□ 0.4
BRPF3-210ENST00000532538 SEPT8Q92599 483 aa17.54■□□□□ 0.4
BRPF3-210ENST00000532538 RRP36Q96EU6 259 aaKnown RBP17.54■□□□□ 0.4
BRPF3-210ENST00000532538 C16orf70Q9BSU1 422 aa17.54■□□□□ 0.4
BRPF3-210ENST00000532538 C1QTNF1Q9BXJ1 281 aa17.54■□□□□ 0.4
BRPF3-210ENST00000532538 USP26Q9BXU7 913 aa17.54■□□□□ 0.4
BRPF3-210ENST00000532538 SENP2Q9HC62 589 aa17.54■□□□□ 0.4
BRPF3-210ENST00000532538 RAPGEFL1Q9UHV5 662 aa17.54■□□□□ 0.4
BRPF3-210ENST00000532538 ZNF215Q9UL58 517 aaPredicted RBP17.54■□□□□ 0.4
BRPF3-210ENST00000532538 LINC01553A4QN01 128 aa17.53■□□□□ 0.4
BRPF3-210ENST00000532538 TREHO43280 583 aa17.53■□□□□ 0.4
BRPF3-210ENST00000532538 STAM2O75886 525 aa17.53■□□□□ 0.4
BRPF3-210ENST00000532538 CHMLP26374 656 aa17.53■□□□□ 0.4
BRPF3-210ENST00000532538 PDE4AP27815 886 aa17.53■□□□□ 0.4
BRPF3-210ENST00000532538 TRIM71Q2Q1W2 868 aaKnown RBP17.53■□□□□ 0.4
BRPF3-210ENST00000532538 SERINC5Q86VE9 423 aa17.53■□□□□ 0.4
BRPF3-210ENST00000532538 YME1L1Q96TA2 773 aa17.53■□□□□ 0.4
BRPF3-210ENST00000532538 RNPEPQ9H4A4 650 aa17.53■□□□□ 0.4
BRPF3-210ENST00000532538 SUGCTQ9HAC7 445 aa17.53■□□□□ 0.4
BRPF3-210ENST00000532538 LMCD1Q9NZU5 365 aa17.53■□□□□ 0.4
BRPF3-210ENST00000532538 NCOR1O75376 2440 aa17.52■□□□□ 0.4
BRPF3-210ENST00000532538 CHD9Q3L8U1 2897 aa17.52■□□□□ 0.4
BRPF3-210ENST00000532538 RBAK-RBAKDNI3L0D1 243 aa17.52■□□□□ 0.4
BRPF3-210ENST00000532538 FIBPO43427 364 aa17.52■□□□□ 0.4
BRPF3-210ENST00000532538 CYTH3O43739 400 aa17.52■□□□□ 0.4
BRPF3-210ENST00000532538 LPXNO60711 386 aa17.52■□□□□ 0.4
BRPF3-210ENST00000532538 HOXD8P13378 290 aaPredicted RBP17.52■□□□□ 0.4
BRPF3-210ENST00000532538 KIF5BP33176 963 aa17.52■□□□□ 0.4
BRPF3-210ENST00000532538 ERVK-21P61565 698 aa17.52■□□□□ 0.4
BRPF3-210ENST00000532538 ARHGAP4P98171 946 aa17.52■□□□□ 0.4
BRPF3-210ENST00000532538 HIC1Q14526 733 aa17.52■□□□□ 0.4
BRPF3-210ENST00000532538 MBTPS1Q14703 1052 aa17.52■□□□□ 0.4
BRPF3-210ENST00000532538 EP400NLQ6ZTU2 488 aa17.52■□□□□ 0.4
BRPF3-210ENST00000532538 NLRX1Q86UT6 975 aa17.52■□□□□ 0.4
BRPF3-210ENST00000532538 MYL10Q9BUA6 226 aa17.52■□□□□ 0.4
BRPF3-210ENST00000532538 BCAS3Q9H6U6 928 aa17.52■□□□□ 0.4
BRPF3-210ENST00000532538 SETD4Q9NVD3 440 aa17.52■□□□□ 0.4
BRPF3-210ENST00000532538 SUPT16HQ9Y5B9 1047 aaKnown RBP17.52■□□□□ 0.4
BRPF3-210ENST00000532538 CCDC69A6NI79 296 aa17.51■□□□□ 0.39
BRPF3-210ENST00000532538 MRPS9P82933 396 aaKnown RBP17.51■□□□□ 0.39
BRPF3-210ENST00000532538 TROAPQ12815 778 aa17.51■□□□□ 0.39
BRPF3-210ENST00000532538 SLC35G1Q2M3R5 365 aa17.51■□□□□ 0.39
BRPF3-210ENST00000532538 TRAF7Q6Q0C0 670 aa17.51■□□□□ 0.39
BRPF3-210ENST00000532538 METTL7BQ6UX53 244 aa17.51■□□□□ 0.39
BRPF3-210ENST00000532538 C17orf80Q9BSJ5 609 aa17.51■□□□□ 0.39
BRPF3-210ENST00000532538 LOXHD1Q8IVV2 1947 aa17.51■□□□□ 0.39
BRPF3-210ENST00000532538 IRX6P78412 446 aaPredicted RBP17.5■□□□□ 0.39
BRPF3-210ENST00000532538 PTPROQ16827 1216 aa17.5■□□□□ 0.39
BRPF3-210ENST00000532538 PLEKHG4Q58EX7 1191 aa17.5■□□□□ 0.39
BRPF3-210ENST00000532538 USP17L6PQ6QN14 398 aa17.5■□□□□ 0.39
BRPF3-210ENST00000532538 TRIM50Q86XT4 487 aa17.5■□□□□ 0.39
BRPF3-210ENST00000532538 ZNF654Q8IZM8 581 aa17.5■□□□□ 0.39
BRPF3-210ENST00000532538 CHD7Q9P2D1 2997 aa17.5■□□□□ 0.39
BRPF3-210ENST00000532538 RALGAPA2Q2PPJ7 1873 aa17.5■□□□□ 0.39
BRPF3-210ENST00000532538 SPTBN5Q9NRC6 3674 aaKnown RBP17.5■□□□□ 0.39
BRPF3-210ENST00000532538 SPATA31C2B4DYI2 1134 aa17.49■□□□□ 0.39
BRPF3-210ENST00000532538 ICAM3P32942 547 aa17.49■□□□□ 0.39
BRPF3-210ENST00000532538 GIMAP8Q8ND71 665 aaPredicted RBP17.49■□□□□ 0.39
BRPF3-210ENST00000532538 GPR20Q99678 358 aa17.49■□□□□ 0.39
BRPF3-210ENST00000532538 UBE2ZQ9H832 354 aaPredicted RBP17.49■□□□□ 0.39
BRPF3-210ENST00000532538 PKD2L1Q9P0L9 805 aa17.49■□□□□ 0.39
BRPF3-210ENST00000532538 RBM8AQ9Y5S9 174 aaKnown RBP17.49■□□□□ 0.39
BRPF3-210ENST00000532538 TAF6LQ9Y6J9 622 aa17.49■□□□□ 0.39
BRPF3-210ENST00000532538 SGSM2O43147 1006 aa17.48■□□□□ 0.39
BRPF3-210ENST00000532538 CAND2O75155 1236 aa17.48■□□□□ 0.39
BRPF3-210ENST00000532538 DDAH1O94760 285 aa17.48■□□□□ 0.39
BRPF3-210ENST00000532538 KCNA5P22460 613 aa17.48■□□□□ 0.39
BRPF3-210ENST00000532538 GNAQP50148 359 aa17.48■□□□□ 0.39
BRPF3-210ENST00000532538 PCNX4Q63HM2 1172 aa17.48■□□□□ 0.39
BRPF3-210ENST00000532538 IGDCC4Q8TDY8 1250 aa17.48■□□□□ 0.39
BRPF3-210ENST00000532538 FAM122AQ96E09 287 aa17.48■□□□□ 0.39
BRPF3-210ENST00000532538 INPP4AQ96PE3 977 aaPredicted RBP17.48■□□□□ 0.39
BRPF3-210ENST00000532538 LZTS2Q9BRK4 669 aa17.48■□□□□ 0.39
BRPF3-210ENST00000532538 SPZ1Q9BXG8 430 aa17.48■□□□□ 0.39
BRPF3-210ENST00000532538 IFIH1Q9BYX4 1025 aaKnown RBP17.48■□□□□ 0.39
BRPF3-210ENST00000532538 PRC1O43663 620 aa17.47■□□□□ 0.39
BRPF3-210ENST00000532538 RXRAP19793 462 aa17.47■□□□□ 0.39
BRPF3-210ENST00000532538 SSTR3P32745 418 aaPredicted RBP17.47■□□□□ 0.39
BRPF3-210ENST00000532538 ANTXR2P58335 489 aa17.47■□□□□ 0.39
BRPF3-210ENST00000532538 GPM6BQ13491 265 aa17.47■□□□□ 0.39
BRPF3-210ENST00000532538 RSPH3Q86UC2 560 aa17.47■□□□□ 0.39
BRPF3-210ENST00000532538 MB21D2Q8IYB1 491 aaPredicted RBP17.47■□□□□ 0.39
BRPF3-210ENST00000532538 CMTR1Q8N1G2 835 aaKnown RBP17.47■□□□□ 0.39
BRPF3-210ENST00000532538 TMTC2Q8N394 836 aa17.47■□□□□ 0.39
BRPF3-210ENST00000532538 CCDC82Q8N4S0 544 aa17.47■□□□□ 0.39
BRPF3-210ENST00000532538 APBB2Q92870 758 aa17.47■□□□□ 0.39
BRPF3-210ENST00000532538 GLG1Q92896 1179 aa17.47■□□□□ 0.39
BRPF3-210ENST00000532538 SAMD11Q96NU1 681 aa17.47■□□□□ 0.39
BRPF3-210ENST00000532538 EPHX3Q9H6B9 360 aa17.47■□□□□ 0.39
BRPF3-210ENST00000532538 LY9Q9HBG7 655 aa17.47■□□□□ 0.39
BRPF3-210ENST00000532538 FRMPD4Q14CM0 1322 aa17.47■□□□□ 0.39
BRPF3-210ENST00000532538 BRWD1Q9NSI6 2320 aa17.46■□□□□ 0.39
BRPF3-210ENST00000532538 SPDYE3A6NKU9 549 aa17.46■□□□□ 0.39
BRPF3-210ENST00000532538 MARK3P27448 753 aa17.46■□□□□ 0.39
BRPF3-210ENST00000532538 MCM5P33992 734 aa17.46■□□□□ 0.39
BRPF3-210ENST00000532538 TCF7P36402 384 aaPredicted RBP17.46■□□□□ 0.39
BRPF3-210ENST00000532538 SEMA3FQ13275 785 aa17.46■□□□□ 0.39
BRPF3-210ENST00000532538 EPC2Q52LR7 807 aa17.46■□□□□ 0.39
BRPF3-210ENST00000532538 XRRA1Q6P2D8 792 aa17.46■□□□□ 0.39
BRPF3-210ENST00000532538 RAB11FIP4Q86YS3 637 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms