RNA–Protein interactions for RNA: ENST00000530727.5

PTPRC-214, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-214ENST00000530727 RNF187Q5TA31 235 aaPredicted RBP5.46□□□□□ -1.54
PTPRC-214ENST00000530727 SOGA3Q5TF21 947 aa5.46□□□□□ -1.54
PTPRC-214ENST00000530727 RPTNQ6XPR3 784 aa5.46□□□□□ -1.54
PTPRC-214ENST00000530727 TMC6Q7Z403 805 aa5.46□□□□□ -1.54
PTPRC-214ENST00000530727 ZCRB1Q8TBF4 217 aaKnown RBP5.46□□□□□ -1.54
PTPRC-214ENST00000530727 TOX2Q96NM4 488 aa5.46□□□□□ -1.54
PTPRC-214ENST00000530727 MBD1Q9UIS9 605 aaPredicted RBP5.46□□□□□ -1.54
PTPRC-214ENST00000530727 CCDC144AA2RUR9 1427 aa5.45□□□□□ -1.54
PTPRC-214ENST00000530727 NPIPB6E9PJ23 425 aa5.45□□□□□ -1.54
PTPRC-214ENST00000530727 CYBBP04839 570 aa5.45□□□□□ -1.54
PTPRC-214ENST00000530727 DBHP09172 617 aa5.45□□□□□ -1.54
PTPRC-214ENST00000530727 ECI1P42126 302 aa5.45□□□□□ -1.54
PTPRC-214ENST00000530727 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
PTPRC-214ENST00000530727 ZC3H14Q6PJT7 736 aaKnown RBP5.45□□□□□ -1.54
PTPRC-214ENST00000530727 PAQR3Q6TCH7 311 aa5.45□□□□□ -1.54
PTPRC-214ENST00000530727 LZTR1Q8N653 840 aa5.45□□□□□ -1.54
PTPRC-214ENST00000530727 USP33Q8TEY7 942 aa5.45□□□□□ -1.54
PTPRC-214ENST00000530727 MMP19Q99542 508 aa5.45□□□□□ -1.54
PTPRC-214ENST00000530727 CD320Q9NPF0 282 aa5.45□□□□□ -1.54
PTPRC-214ENST00000530727 DBR1Q9UK59 544 aaKnown RBP5.45□□□□□ -1.54
PTPRC-214ENST00000530727 SMG5Q9UPR3 1016 aaKnown RBP5.45□□□□□ -1.54
PTPRC-214ENST00000530727 COL4A3BPQ9Y5P4 624 aa5.45□□□□□ -1.54
PTPRC-214ENST00000530727 NOS1P29475 1434 aa5.45□□□□□ -1.54
PTPRC-214ENST00000530727 PIK3C2BO00750 1634 aa5.45□□□□□ -1.54
PTPRC-214ENST00000530727 C7orf72A4D263 438 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 SRGAP3O43295 1099 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 RBM10P98175 930 aaKnown RBP5.44□□□□□ -1.54
PTPRC-214ENST00000530727 KCNA10Q16322 511 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 PLEKHN1Q494U1 663 aaPredicted RBP5.44□□□□□ -1.54
PTPRC-214ENST00000530727 FRS2Q8WU20 508 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 CCDC140Q96MF4 163 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 GCM1Q9NP62 436 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 IFT57Q9NWB7 429 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 IFT172Q9UG01 1749 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 KIF1BO60333 1816 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 CCDC194A0A1B0GVG4 234 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 CPP00450 1065 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 MAPKAPK2P49137 400 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 PPP2R2AP63151 447 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 JAG1P78504 1218 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 CBX2Q14781 532 aaPredicted RBP5.44□□□□□ -1.54
PTPRC-214ENST00000530727 MBLAC2Q68D91 279 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 GGT6Q6P531 493 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 FILIP1Q7Z7B0 1213 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 NPLOC4Q8TAT6 608 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 MORC4Q8TE76 937 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 BRINP2Q9C0B6 783 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 CNTD2Q9H8S5 307 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 PCDH12Q9NPG4 1184 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 BTG4Q9NY30 223 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 SYNMO15061 1565 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 UGGT1Q9NYU2 1555 aa5.44□□□□□ -1.54
PTPRC-214ENST00000530727 TRPM1Q7Z4N2 1603 aa5.43□□□□□ -1.54
PTPRC-214ENST00000530727 CNTLNQ9NXG0 1405 aa5.43□□□□□ -1.54
PTPRC-214ENST00000530727 A0A1W2PQU0 124 aa5.43□□□□□ -1.54
PTPRC-214ENST00000530727 F8W031 263 aaPredicted RBP5.43□□□□□ -1.54
PTPRC-214ENST00000530727 MEFVO15553 781 aaPredicted RBP5.43□□□□□ -1.54
PTPRC-214ENST00000530727 SCG5P05408 212 aa5.43□□□□□ -1.54
PTPRC-214ENST00000530727 LINC00310P59036 64 aa5.43□□□□□ -1.54
PTPRC-214ENST00000530727 CYP4F3Q08477 520 aa5.43□□□□□ -1.54
PTPRC-214ENST00000530727 SF1Q15637 639 aaKnown RBP5.43□□□□□ -1.54
PTPRC-214ENST00000530727 PRSS53Q2L4Q9 553 aa5.43□□□□□ -1.54
PTPRC-214ENST00000530727 E4F1Q66K89 784 aaPredicted RBP5.43□□□□□ -1.54
PTPRC-214ENST00000530727 IQCEQ6IPM2 695 aa5.43□□□□□ -1.54
PTPRC-214ENST00000530727 ZSCAN18Q8TBC5 510 aaPredicted RBP5.43□□□□□ -1.54
PTPRC-214ENST00000530727 MROH2AA6NES4 1674 aa5.43□□□□□ -1.54
PTPRC-214ENST00000530727 PREX1Q8TCU6 1659 aa5.43□□□□□ -1.54
PTPRC-214ENST00000530727 RALGAPBQ86X10 1494 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 PRAG1Q86YV5 1406 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 WASHC2CQ9Y4E1 1318 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 ZC3H12DA2A288 527 aaKnown RBP5.42□□□□□ -1.54
PTPRC-214ENST00000530727 IQCA1LA6NCM1 817 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 CCDC85CA6NKD9 419 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 FUCA1P04066 466 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 GLI4P10075 376 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 EPHB3P54753 998 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 GFRA1P56159 465 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 INF2Q27J81 1249 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 HSP90AB2PQ58FF8 381 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 PPIL6Q8IXY8 311 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 LRRC56Q8IYG6 542 aaPredicted RBP5.42□□□□□ -1.54
PTPRC-214ENST00000530727 ST13P5Q8NFI4 369 aaPredicted RBP5.42□□□□□ -1.54
PTPRC-214ENST00000530727 DIO2Q92813 273 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.42□□□□□ -1.54
PTPRC-214ENST00000530727 MARCH2Q9P0N8 246 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 MAGEC2Q9UBF1 373 aaPredicted RBP5.42□□□□□ -1.54
PTPRC-214ENST00000530727 GABBR1Q9UBS5 961 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 FBLN5Q9UBX5 448 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 CNOT6Q9ULM6 557 aaKnown RBP5.42□□□□□ -1.54
PTPRC-214ENST00000530727 G3BP2Q9UN86 482 aaKnown RBP5.42□□□□□ -1.54
PTPRC-214ENST00000530727 CLTCQ00610 1675 aaKnown RBP5.42□□□□□ -1.54
PTPRC-214ENST00000530727 ADGRB3O60242 1522 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 N4BP3O15049 544 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 PPP1R11O60927 126 aaPredicted RBP5.42□□□□□ -1.54
PTPRC-214ENST00000530727 CFPP27918 469 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 GRIA2P42262 883 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 CDR1P51861 262 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 ZNF200P98182 395 aaPredicted RBP5.42□□□□□ -1.54
PTPRC-214ENST00000530727 KCNAB2Q13303 367 aa5.42□□□□□ -1.54
PTPRC-214ENST00000530727 FZD5Q13467 585 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms