RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 C17orf80Q9BSJ5 609 aa17.29■□□□□ 0.36
CAPN1-219ENST00000530495 USP26Q9BXU7 913 aa17.29■□□□□ 0.36
CAPN1-219ENST00000530495 RNPEPQ9H4A4 650 aa17.29■□□□□ 0.36
CAPN1-219ENST00000530495 SPATA31C2B4DYI2 1134 aa17.28■□□□□ 0.36
CAPN1-219ENST00000530495 TREHO43280 583 aa17.28■□□□□ 0.36
CAPN1-219ENST00000530495 CAND2O75155 1236 aa17.28■□□□□ 0.36
CAPN1-219ENST00000530495 LGALS2P05162 132 aa17.28■□□□□ 0.36
CAPN1-219ENST00000530495 SMIM10L2AP0DMW4 78 aa17.28■□□□□ 0.36
CAPN1-219ENST00000530495 SMIM10L2BP0DMW5 78 aa17.28■□□□□ 0.36
CAPN1-219ENST00000530495 ICAM3P32942 547 aa17.28■□□□□ 0.36
CAPN1-219ENST00000530495 MRPS9P82933 396 aaKnown RBP17.28■□□□□ 0.36
CAPN1-219ENST00000530495 TROAPQ12815 778 aa17.28■□□□□ 0.36
CAPN1-219ENST00000530495 LEXMQ3ZCV2 418 aa17.28■□□□□ 0.36
CAPN1-219ENST00000530495 KHSRPQ92945 711 aaKnown RBP eCLIP17.28■□□□□ 0.36
CAPN1-219ENST00000530495 TOP1MTQ969P6 601 aa17.28■□□□□ 0.36
CAPN1-219ENST00000530495 UBE2ZQ9H832 354 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-219ENST00000530495 FRMPD4Q14CM0 1322 aa17.27■□□□□ 0.36
CAPN1-219ENST00000530495 IFIT3O14879 490 aaKnown RBP17.27■□□□□ 0.36
CAPN1-219ENST00000530495 GPR37L1O60883 481 aa17.27■□□□□ 0.36
CAPN1-219ENST00000530495 CYP21A2P08686 494 aa17.27■□□□□ 0.36
CAPN1-219ENST00000530495 NEDD9Q14511 834 aa17.27■□□□□ 0.36
CAPN1-219ENST00000530495 GNPTABQ3T906 1256 aa17.27■□□□□ 0.36
CAPN1-219ENST00000530495 TMEM31Q5JXX7 168 aa17.27■□□□□ 0.36
CAPN1-219ENST00000530495 METTL7BQ6UX53 244 aa17.27■□□□□ 0.36
CAPN1-219ENST00000530495 MYOCDQ8IZQ8 938 aa17.27■□□□□ 0.36
CAPN1-219ENST00000530495 SEPT8Q92599 483 aa17.27■□□□□ 0.36
CAPN1-219ENST00000530495 SAMD11Q96NU1 681 aa17.27■□□□□ 0.36
CAPN1-219ENST00000530495 INPP4AQ96PE3 977 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-219ENST00000530495 SENP2Q9HC62 589 aa17.27■□□□□ 0.36
CAPN1-219ENST00000530495 CD320Q9NPF0 282 aa17.27■□□□□ 0.36
CAPN1-219ENST00000530495 U3KPZ7 1027 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-219ENST00000530495 ERICH2A1L162 156 aa17.26■□□□□ 0.35
CAPN1-219ENST00000530495 PI4K2BG5E9Z4 385 aa17.26■□□□□ 0.35
CAPN1-219ENST00000530495 NOP56O00567 594 aaKnown RBP17.26■□□□□ 0.35
CAPN1-219ENST00000530495 GNAT1P11488 350 aa17.26■□□□□ 0.35
CAPN1-219ENST00000530495 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.26■□□□□ 0.35
CAPN1-219ENST00000530495 EXOC6Q8TAG9 804 aa17.26■□□□□ 0.35
CAPN1-219ENST00000530495 MRPL38Q96DV4 380 aaKnown RBP17.26■□□□□ 0.35
CAPN1-219ENST00000530495 GPR20Q99678 358 aa17.26■□□□□ 0.35
CAPN1-219ENST00000530495 OSBPL7Q9BZF2 842 aa17.26■□□□□ 0.35
CAPN1-219ENST00000530495 DOCK5Q9H7D0 1870 aa17.26■□□□□ 0.35
CAPN1-219ENST00000530495 BRWD1Q9NSI6 2320 aa17.26■□□□□ 0.35
CAPN1-219ENST00000530495 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.25■□□□□ 0.35
CAPN1-219ENST00000530495 FIBPO43427 364 aa17.25■□□□□ 0.35
CAPN1-219ENST00000530495 ADAM17P78536 824 aa17.25■□□□□ 0.35
CAPN1-219ENST00000530495 PTH1RQ03431 593 aa17.25■□□□□ 0.35
CAPN1-219ENST00000530495 SEMA3FQ13275 785 aa17.25■□□□□ 0.35
CAPN1-219ENST00000530495 WTAPQ15007 396 aa17.25■□□□□ 0.35
CAPN1-219ENST00000530495 PTPROQ16827 1216 aa17.25■□□□□ 0.35
CAPN1-219ENST00000530495 EPC2Q52LR7 807 aa17.25■□□□□ 0.35
CAPN1-219ENST00000530495 CYFIP1Q7L576 1253 aa17.25■□□□□ 0.35
CAPN1-219ENST00000530495 FAM178BQ8IXR5 827 aa17.25■□□□□ 0.35
CAPN1-219ENST00000530495 C11orf16Q9NQ32 467 aa17.25■□□□□ 0.35
CAPN1-219ENST00000530495 SETD4Q9NVD3 440 aa17.25■□□□□ 0.35
CAPN1-219ENST00000530495 RTEL1Q9NZ71 1219 aa17.25■□□□□ 0.35
CAPN1-219ENST00000530495 H3BNC9 293 aa17.24■□□□□ 0.35
CAPN1-219ENST00000530495 GSPT1P15170 499 aaKnown RBP17.24■□□□□ 0.35
CAPN1-219ENST00000530495 KCNA5P22460 613 aa17.24■□□□□ 0.35
CAPN1-219ENST00000530495 SART3Q15020 963 aaKnown RBP17.24■□□□□ 0.35
CAPN1-219ENST00000530495 FAM26DQ5JW98 314 aa17.24■□□□□ 0.35
CAPN1-219ENST00000530495 TTC22Q5TAA0 569 aa17.24■□□□□ 0.35
CAPN1-219ENST00000530495 NCOA7Q8NI08 942 aa17.24■□□□□ 0.35
CAPN1-219ENST00000530495 IGDCC4Q8TDY8 1250 aa17.24■□□□□ 0.35
CAPN1-219ENST00000530495 RUFY2Q8WXA3 655 aa17.24■□□□□ 0.35
CAPN1-219ENST00000530495 YME1L1Q96TA2 773 aa17.24■□□□□ 0.35
CAPN1-219ENST00000530495 SENP7Q9BQF6 1050 aa17.24■□□□□ 0.35
CAPN1-219ENST00000530495 HCN4Q9Y3Q4 1203 aa17.24■□□□□ 0.35
CAPN1-219ENST00000530495 COL4A6Q14031 1691 aa17.23■□□□□ 0.35
CAPN1-219ENST00000530495 NLRC5Q86WI3 1866 aa17.23■□□□□ 0.35
CAPN1-219ENST00000530495 E7EWF7 191 aa17.23■□□□□ 0.35
CAPN1-219ENST00000530495 UPP2O95045 317 aa17.23■□□□□ 0.35
CAPN1-219ENST00000530495 PUS10Q3MIT2 529 aaKnown RBP17.23■□□□□ 0.35
CAPN1-219ENST00000530495 PCNX4Q63HM2 1172 aa17.23■□□□□ 0.35
CAPN1-219ENST00000530495 XRRA1Q6P2D8 792 aa17.23■□□□□ 0.35
CAPN1-219ENST00000530495 CATIPQ7Z7H3 387 aa17.23■□□□□ 0.35
CAPN1-219ENST00000530495 RALYLQ86SE5 291 aaKnown RBP17.23■□□□□ 0.35
CAPN1-219ENST00000530495 NEK9Q8TD19 979 aa17.23■□□□□ 0.35
CAPN1-219ENST00000530495 APBB2Q92870 758 aa17.23■□□□□ 0.35
CAPN1-219ENST00000530495 MAP3K14Q99558 947 aa17.23■□□□□ 0.35
CAPN1-219ENST00000530495 ZNF215Q9UL58 517 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-219ENST00000530495 TAF6LQ9Y6J9 622 aa17.23■□□□□ 0.35
CAPN1-219ENST00000530495 KAT6AQ92794 2004 aa17.23■□□□□ 0.35
CAPN1-219ENST00000530495 GRXCR2A6NFK2 248 aa17.22■□□□□ 0.35
CAPN1-219ENST00000530495 PIK3CDO00329 1044 aa17.22■□□□□ 0.35
CAPN1-219ENST00000530495 CTSHP09668 335 aa17.22■□□□□ 0.35
CAPN1-219ENST00000530495 CHMLP26374 656 aa17.22■□□□□ 0.35
CAPN1-219ENST00000530495 PDE4AP27815 886 aa17.22■□□□□ 0.35
CAPN1-219ENST00000530495 SMARCA1P28370 1054 aa17.22■□□□□ 0.35
CAPN1-219ENST00000530495 GPM6BQ13491 265 aa17.22■□□□□ 0.35
CAPN1-219ENST00000530495 PTCRAQ6ISU1 281 aaPredicted RBP17.22■□□□□ 0.35
CAPN1-219ENST00000530495 TRIM50Q86XT4 487 aa17.22■□□□□ 0.35
CAPN1-219ENST00000530495 TMEM192Q8IY95 271 aa17.22■□□□□ 0.35
CAPN1-219ENST00000530495 GJD3Q8N144 294 aa17.22■□□□□ 0.35
CAPN1-219ENST00000530495 BANK1Q8NDB2 785 aa17.22■□□□□ 0.35
CAPN1-219ENST00000530495 LMBR1Q8WVP7 490 aa17.22■□□□□ 0.35
CAPN1-219ENST00000530495 TELO2Q9Y4R8 837 aa17.22■□□□□ 0.35
CAPN1-219ENST00000530495 RALGAPA2Q2PPJ7 1873 aa17.22■□□□□ 0.35
CAPN1-219ENST00000530495 NRCAMQ92823 1304 aa17.21■□□□□ 0.35
CAPN1-219ENST00000530495 MEIS2O14770 477 aa17.21■□□□□ 0.35
CAPN1-219ENST00000530495 CHRNA1P02708 482 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms