RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 VEZTQ9HBM0 779 aa15.64■□□□□ 0.09
USP48-213ENST00000529637 GPCPD1Q9NPB8 672 aa15.64■□□□□ 0.09
USP48-213ENST00000529637 GDF3Q9NR23 364 aa15.64■□□□□ 0.09
USP48-213ENST00000529637 USP17L5A8MUK1 530 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 USO1O60763 962 aaKnown RBP15.63■□□□□ 0.09
USP48-213ENST00000529637 PRLRP16471 622 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 TCP1P17987 556 aaKnown RBP15.63■□□□□ 0.09
USP48-213ENST00000529637 KLHDC7AQ5VTJ3 777 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 CYB5D1Q6P9G0 228 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 MAATS1Q7Z4T9 603 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 RPAINQ86UA6 219 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 CLEC10AQ8IUN9 316 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 FUKQ8N0W3 1084 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 COA7Q96BR5 231 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 CD209Q9NNX6 404 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 PACSIN2Q9UNF0 486 aaPredicted RBP15.63■□□□□ 0.09
USP48-213ENST00000529637 PAFAH1B1P43034 410 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 RASSF7Q02833 373 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 GFPT1Q06210 699 aaPredicted RBP15.63■□□□□ 0.09
USP48-213ENST00000529637 PPP2R5AQ15172 486 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 RC3H1Q5TC82 1133 aaKnown RBP15.63■□□□□ 0.09
USP48-213ENST00000529637 P2RX5Q93086 422 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 LZTS2Q9BRK4 669 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 TSGA10Q9BZW7 698 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 TRIM9Q9C026 710 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 KBTBD4Q9NVX7 518 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 PLAAQ9Y263 795 aa15.63■□□□□ 0.09
USP48-213ENST00000529637 A6NNZ2 444 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 RIMBP2O15034 1052 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 RHOBTB3O94955 611 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 TNNI2P48788 182 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 AMPD3Q01432 767 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 KCNB1Q14721 858 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 TUBB8Q3ZCM7 444 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 PARP9Q8IXQ6 854 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 IFT20Q8IY31 132 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 GIMAP8Q8ND71 665 aaPredicted RBP15.62■□□□□ 0.09
USP48-213ENST00000529637 FAXDC2Q96IV6 333 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 KRT12Q99456 494 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 DNAJC5Q9H3Z4 198 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 GGA1Q9UJY5 639 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 TPX2Q9ULW0 747 aaKnown RBP15.62■□□□□ 0.09
USP48-213ENST00000529637 AKR1B10O60218 316 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 SF3A3Q12874 501 aaKnown RBP eCLIP15.62■□□□□ 0.09
USP48-213ENST00000529637 DHX37Q8IY37 1157 aaKnown RBP15.62■□□□□ 0.09
USP48-213ENST00000529637 RTFDC1Q9BY42 306 aaPredicted RBP15.62■□□□□ 0.09
USP48-213ENST00000529637 PLAGL2Q9UPG8 496 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 BICDL2A1A5D9 508 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 LAD1O00515 517 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 TNFRSF8P28908 595 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 NUP58Q9BVL2 599 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 ZMYND12Q9H0C1 365 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 SLC24A3Q9HC58 644 aa15.62■□□□□ 0.09
USP48-213ENST00000529637 M0R2N6 131 aa15.61■□□□□ 0.09
USP48-213ENST00000529637 RPSAP08865 295 aaKnown RBP15.61■□□□□ 0.09
USP48-213ENST00000529637 CCNE1P24864 410 aa15.61■□□□□ 0.09
USP48-213ENST00000529637 CDR1P51861 262 aa15.61■□□□□ 0.09
USP48-213ENST00000529637 CCDC121Q6ZUS5 278 aa15.61■□□□□ 0.09
USP48-213ENST00000529637 ANKS1AQ92625 1134 aa15.61■□□□□ 0.09
USP48-213ENST00000529637 DHTKD1Q96HY7 919 aaPredicted RBP15.61■□□□□ 0.09
USP48-213ENST00000529637 SCN7AQ01118 1682 aa15.61■□□□□ 0.09
USP48-213ENST00000529637 PPP4CP60510 307 aa15.61■□□□□ 0.09
USP48-213ENST00000529637 SNCBQ16143 134 aa15.61■□□□□ 0.09
USP48-213ENST00000529637 CALCRLQ16602 461 aa15.61■□□□□ 0.09
USP48-213ENST00000529637 EMC10Q5UCC4 262 aa15.61■□□□□ 0.09
USP48-213ENST00000529637 TANGO6Q9C0B7 1094 aa15.61■□□□□ 0.09
USP48-213ENST00000529637 MMRN2Q9H8L6 949 aa15.61■□□□□ 0.09
USP48-213ENST00000529637 FLT1P17948 1338 aa15.61■□□□□ 0.09
USP48-213ENST00000529637 LAMB2P55268 1798 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 MPHOSPH10O00566 681 aaKnown RBP15.6■□□□□ 0.09
USP48-213ENST00000529637 SKAP2O75563 359 aaPredicted RBP15.6■□□□□ 0.09
USP48-213ENST00000529637 FTCDO95954 541 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 SLC1A4P43007 532 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 MAGEA1P43355 309 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 SV2BQ7L1I2 683 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 FAM114A1Q8IWE2 563 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 DAGLBQ8NCG7 672 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 RUBCNQ92622 972 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 SPZ1Q9BXG8 430 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 GOLGA6L7A0A1B0GV03 622 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 PPP1R12BO60237 982 aaPredicted RBP15.6■□□□□ 0.09
USP48-213ENST00000529637 GTF2IP78347 998 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 BYSLQ13895 437 aaKnown RBP15.6■□□□□ 0.09
USP48-213ENST00000529637 TMEM266Q2M3C6 531 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 CCDC155Q8N6L0 562 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 RETREG2Q8NC44 543 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 NEDD1Q8NHV4 660 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 AK8Q96MA6 479 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 ALS2CR12Q96Q35 445 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 POTEMA6NI47 508 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 LRRC53A6NM62 1247 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 DCDC2CA8MYV0 355 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 PLCG2P16885 1265 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 PAK2Q13177 524 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 RRAGAQ7L523 313 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 LRRC4CQ9HCJ2 640 aa15.6■□□□□ 0.09
USP48-213ENST00000529637 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.59■□□□□ 0.09
USP48-213ENST00000529637 NEBLO76041 1014 aa15.59■□□□□ 0.09
USP48-213ENST00000529637 TDP2O95551 362 aa15.59■□□□□ 0.09
USP48-213ENST00000529637 MYL1P05976 194 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms