RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 ANTXR2P58335 489 aa18.02■□□□□ 0.48
CTSB-215ENST00000528965 ZNF200P98182 395 aaPredicted RBP18.02■□□□□ 0.48
CTSB-215ENST00000528965 TRAF7Q6Q0C0 670 aa18.02■□□□□ 0.48
CTSB-215ENST00000528965 NFXL1Q6ZNB6 911 aa18.02■□□□□ 0.48
CTSB-215ENST00000528965 NLRX1Q86UT6 975 aa18.02■□□□□ 0.48
CTSB-215ENST00000528965 TMTC2Q8N394 836 aa18.02■□□□□ 0.48
CTSB-215ENST00000528965 IGDCC4Q8TDY8 1250 aa18.02■□□□□ 0.48
CTSB-215ENST00000528965 GPKOWQ92917 476 aaPredicted RBP eCLIP18.02■□□□□ 0.48
CTSB-215ENST00000528965 MAP4K1Q92918 833 aa18.02■□□□□ 0.48
CTSB-215ENST00000528965 WNT8BQ93098 351 aa18.02■□□□□ 0.48
CTSB-215ENST00000528965 HLA-CQ95604 372 aa18.02■□□□□ 0.48
CTSB-215ENST00000528965 COL4A4P53420 1690 aaPredicted RBP18.02■□□□□ 0.47
CTSB-215ENST00000528965 MYH7BA7E2Y1 1941 aa18.02■□□□□ 0.47
CTSB-215ENST00000528965 LCHNA4D1U4 455 aa18.01■□□□□ 0.47
CTSB-215ENST00000528965 CCDC69A6NI79 296 aa18.01■□□□□ 0.47
CTSB-215ENST00000528965 SPATA31C2B4DYI2 1134 aa18.01■□□□□ 0.47
CTSB-215ENST00000528965 PIK3CDO00329 1044 aa18.01■□□□□ 0.47
CTSB-215ENST00000528965 HOXC8P31273 242 aa18.01■□□□□ 0.47
CTSB-215ENST00000528965 IRX6P78412 446 aaPredicted RBP18.01■□□□□ 0.47
CTSB-215ENST00000528965 MRPS9P82933 396 aaKnown RBP18.01■□□□□ 0.47
CTSB-215ENST00000528965 TFF2Q03403 129 aa18.01■□□□□ 0.47
CTSB-215ENST00000528965 MBTPS1Q14703 1052 aa18.01■□□□□ 0.47
CTSB-215ENST00000528965 PCNX4Q63HM2 1172 aa18.01■□□□□ 0.47
CTSB-215ENST00000528965 CYFIP1Q7L576 1253 aa18.01■□□□□ 0.47
CTSB-215ENST00000528965 TMCO2Q7Z6W1 182 aaPredicted RBP18.01■□□□□ 0.47
CTSB-215ENST00000528965 GIMAP8Q8ND71 665 aaPredicted RBP18.01■□□□□ 0.47
CTSB-215ENST00000528965 GDPD5Q8WTR4 605 aa18.01■□□□□ 0.47
CTSB-215ENST00000528965 ZFP91Q96JP5 570 aaPredicted RBP18.01■□□□□ 0.47
CTSB-215ENST00000528965 LY9Q9HBG7 655 aa18.01■□□□□ 0.47
CTSB-215ENST00000528965 TAF6LQ9Y6J9 622 aa18.01■□□□□ 0.47
CTSB-215ENST00000528965 PTPRSQ13332 1948 aa18■□□□□ 0.47
CTSB-215ENST00000528965 LINC01553A4QN01 128 aa18■□□□□ 0.47
CTSB-215ENST00000528965 PRC1O43663 620 aa18■□□□□ 0.47
CTSB-215ENST00000528965 CALM1P0DP23 149 aa18■□□□□ 0.47
CTSB-215ENST00000528965 CALM2P0DP24 149 aa18■□□□□ 0.47
CTSB-215ENST00000528965 CALM3P0DP25 149 aa18■□□□□ 0.47
CTSB-215ENST00000528965 MCM5P33992 734 aa18■□□□□ 0.47
CTSB-215ENST00000528965 ERVK-21P61565 698 aa18■□□□□ 0.47
CTSB-215ENST00000528965 KRT40Q6A162 431 aa18■□□□□ 0.47
CTSB-215ENST00000528965 FAM117BQ6P1L5 589 aa18■□□□□ 0.47
CTSB-215ENST00000528965 SEPT8Q92599 483 aa18■□□□□ 0.47
CTSB-215ENST00000528965 CDHR1Q96JP9 859 aa18■□□□□ 0.47
CTSB-215ENST00000528965 TMEM87BQ96K49 555 aa18■□□□□ 0.47
CTSB-215ENST00000528965 GPR20Q99678 358 aa18■□□□□ 0.47
CTSB-215ENST00000528965 SENP7Q9BQF6 1050 aa18■□□□□ 0.47
CTSB-215ENST00000528965 INSL6Q9Y581 213 aa18■□□□□ 0.47
CTSB-215ENST00000528965 BAZ2BQ9UIF8 2168 aaKnown RBP18■□□□□ 0.47
CTSB-215ENST00000528965 BMP1P13497 986 aa17.99■□□□□ 0.47
CTSB-215ENST00000528965 KCNQ1P51787 676 aa17.99■□□□□ 0.47
CTSB-215ENST00000528965 HIC1Q14526 733 aa17.99■□□□□ 0.47
CTSB-215ENST00000528965 TCTN1Q2MV58 587 aa17.99■□□□□ 0.47
CTSB-215ENST00000528965 MYOCDQ8IZQ8 938 aa17.99■□□□□ 0.47
CTSB-215ENST00000528965 DBF4BQ8NFT6 615 aa17.99■□□□□ 0.47
CTSB-215ENST00000528965 MYL10Q9BUA6 226 aa17.99■□□□□ 0.47
CTSB-215ENST00000528965 RTEL1Q9NZ71 1219 aa17.99■□□□□ 0.47
CTSB-215ENST00000528965 MTUS1Q9ULD2 1270 aa17.99■□□□□ 0.47
CTSB-215ENST00000528965 TRANK1O15050 2925 aa17.98■□□□□ 0.47
CTSB-215ENST00000528965 SH2B2O14492 632 aaPredicted RBP17.98■□□□□ 0.47
CTSB-215ENST00000528965 TREHO43280 583 aa17.98■□□□□ 0.47
CTSB-215ENST00000528965 LPXNO60711 386 aa17.98■□□□□ 0.47
CTSB-215ENST00000528965 PLEKHG4Q58EX7 1191 aa17.98■□□□□ 0.47
CTSB-215ENST00000528965 USP17L6PQ6QN14 398 aa17.98■□□□□ 0.47
CTSB-215ENST00000528965 APBB2Q92870 758 aa17.98■□□□□ 0.47
CTSB-215ENST00000528965 GPRASP2Q96D09 838 aa17.98■□□□□ 0.47
CTSB-215ENST00000528965 RNPEPQ9H4A4 650 aa17.98■□□□□ 0.47
CTSB-215ENST00000528965 MUC3AQ02505 3323 aa17.97■□□□□ 0.47
CTSB-215ENST00000528965 CTSHP09668 335 aa17.97■□□□□ 0.47
CTSB-215ENST00000528965 SP4Q02446 784 aa17.97■□□□□ 0.47
CTSB-215ENST00000528965 SEMA3FQ13275 785 aa17.97■□□□□ 0.47
CTSB-215ENST00000528965 UTP14CQ5TAP6 766 aaKnown RBP17.97■□□□□ 0.47
CTSB-215ENST00000528965 SPRED2Q7Z698 418 aa17.97■□□□□ 0.47
CTSB-215ENST00000528965 FBXO22Q8NEZ5 403 aa17.97■□□□□ 0.47
CTSB-215ENST00000528965 SAMD11Q96NU1 681 aa17.97■□□□□ 0.47
CTSB-215ENST00000528965 PSTPIP2Q9H939 334 aa17.97■□□□□ 0.47
CTSB-215ENST00000528965 EHMT1Q9H9B1 1298 aa17.97■□□□□ 0.47
CTSB-215ENST00000528965 NRCAMQ92823 1304 aa17.97■□□□□ 0.47
CTSB-215ENST00000528965 SPDYE3A6NKU9 549 aa17.96■□□□□ 0.47
CTSB-215ENST00000528965 MEIS2O14770 477 aa17.96■□□□□ 0.47
CTSB-215ENST00000528965 PLEKHA8P1O95397 391 aa17.96■□□□□ 0.47
CTSB-215ENST00000528965 COL9A1P20849 921 aa17.96■□□□□ 0.47
CTSB-215ENST00000528965 LIFRP42702 1097 aa17.96■□□□□ 0.47
CTSB-215ENST00000528965 ARHGAP4P98171 946 aa17.96■□□□□ 0.47
CTSB-215ENST00000528965 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.96■□□□□ 0.47
CTSB-215ENST00000528965 TRIM50Q86XT4 487 aa17.96■□□□□ 0.47
CTSB-215ENST00000528965 NECAB3Q96P71 396 aaPredicted RBP17.96■□□□□ 0.47
CTSB-215ENST00000528965 YME1L1Q96TA2 773 aa17.96■□□□□ 0.47
CTSB-215ENST00000528965 C1QTNF1Q9BXJ1 281 aa17.96■□□□□ 0.47
CTSB-215ENST00000528965 SUGCTQ9HAC7 445 aa17.96■□□□□ 0.47
CTSB-215ENST00000528965 SETD4Q9NVD3 440 aa17.96■□□□□ 0.47
CTSB-215ENST00000528965 SLC12A7Q9Y666 1083 aa17.96■□□□□ 0.47
CTSB-215ENST00000528965 SIP14410 1827 aa17.95■□□□□ 0.46
CTSB-215ENST00000528965 MICAL3Q7RTP6 2002 aa17.95■□□□□ 0.46
CTSB-215ENST00000528965 HTRA4P83105 476 aaPredicted RBP17.95■□□□□ 0.46
CTSB-215ENST00000528965 MKRN4PQ13434 485 aaPredicted RBP17.95■□□□□ 0.46
CTSB-215ENST00000528965 PTPROQ16827 1216 aa17.95■□□□□ 0.46
CTSB-215ENST00000528965 TAF2Q6P1X5 1199 aa17.95■□□□□ 0.46
CTSB-215ENST00000528965 RSPH3Q86UC2 560 aa17.95■□□□□ 0.46
CTSB-215ENST00000528965 SP7Q8TDD2 431 aaPredicted RBP17.95■□□□□ 0.46
CTSB-215ENST00000528965 LMBR1Q8WVP7 490 aa17.95■□□□□ 0.46
CTSB-215ENST00000528965 LSG1Q9H089 658 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms