RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 SH2B2O14492 632 aaPredicted RBP17.92■□□□□ 0.46
CLNS1A-210ENST00000528364 TREHO43280 583 aa17.92■□□□□ 0.46
CLNS1A-210ENST00000528364 LPXNO60711 386 aa17.92■□□□□ 0.46
CLNS1A-210ENST00000528364 DDAH1O94760 285 aa17.92■□□□□ 0.46
CLNS1A-210ENST00000528364 SMIM10L2AP0DMW4 78 aa17.92■□□□□ 0.46
CLNS1A-210ENST00000528364 SMIM10L2BP0DMW5 78 aa17.92■□□□□ 0.46
CLNS1A-210ENST00000528364 POU3F3P20264 500 aaPredicted RBP17.92■□□□□ 0.46
CLNS1A-210ENST00000528364 THPOP40225 353 aa17.92■□□□□ 0.46
CLNS1A-210ENST00000528364 SP4Q02446 784 aa17.92■□□□□ 0.46
CLNS1A-210ENST00000528364 GRB10Q13322 594 aa17.92■□□□□ 0.46
CLNS1A-210ENST00000528364 SKIV2LQ15477 1246 aaKnown RBP17.92■□□□□ 0.46
CLNS1A-210ENST00000528364 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.92■□□□□ 0.461e-7■■■□□ 16.6
CLNS1A-210ENST00000528364 SERINC5Q86VE9 423 aa17.92■□□□□ 0.46
CLNS1A-210ENST00000528364 ATP6V0A1Q93050 837 aa17.92■□□□□ 0.46
CLNS1A-210ENST00000528364 MAP3K14Q99558 947 aa17.92■□□□□ 0.46
CLNS1A-210ENST00000528364 ESYT1Q9BSJ8 1104 aa17.92■□□□□ 0.46
CLNS1A-210ENST00000528364 FRMPD4Q14CM0 1322 aa17.92■□□□□ 0.46
CLNS1A-210ENST00000528364 ABHD14A-ACY1A0A1B0GW23 586 aa17.91■□□□□ 0.46
CLNS1A-210ENST00000528364 C17orf102A2RUQ5 167 aa17.91■□□□□ 0.46
CLNS1A-210ENST00000528364 TNFRSF10AO00220 468 aa17.91■□□□□ 0.46
CLNS1A-210ENST00000528364 PARNO95453 639 aaKnown RBP17.91■□□□□ 0.46
CLNS1A-210ENST00000528364 KIF5BP33176 963 aa17.91■□□□□ 0.46
CLNS1A-210ENST00000528364 MCM5P33992 734 aa17.91■□□□□ 0.46
CLNS1A-210ENST00000528364 IKBKEQ14164 716 aa17.91■□□□□ 0.46
CLNS1A-210ENST00000528364 GNPTABQ3T906 1256 aa17.91■□□□□ 0.46
CLNS1A-210ENST00000528364 UTP14CQ5TAP6 766 aaKnown RBP17.91■□□□□ 0.46
CLNS1A-210ENST00000528364 CREB3L3Q68CJ9 461 aa17.91■□□□□ 0.46
CLNS1A-210ENST00000528364 TRIM50Q86XT4 487 aa17.91■□□□□ 0.46
CLNS1A-210ENST00000528364 CCDC82Q8N4S0 544 aa17.91■□□□□ 0.46
CLNS1A-210ENST00000528364 DBF4BQ8NFT6 615 aa17.91■□□□□ 0.46
CLNS1A-210ENST00000528364 ADAMTS19Q8TE59 1207 aa17.91■□□□□ 0.46
CLNS1A-210ENST00000528364 NECAB3Q96P71 396 aaPredicted RBP17.91■□□□□ 0.46
CLNS1A-210ENST00000528364 GPR20Q99678 358 aa17.91■□□□□ 0.46
CLNS1A-210ENST00000528364 SETD4Q9NVD3 440 aa17.91■□□□□ 0.46
CLNS1A-210ENST00000528364 CCDC69A6NI79 296 aa17.9■□□□□ 0.46
CLNS1A-210ENST00000528364 RSPH10B2B2RC85 870 aa17.9■□□□□ 0.46
CLNS1A-210ENST00000528364 NOP56O00567 594 aaKnown RBP17.9■□□□□ 0.46
CLNS1A-210ENST00000528364 GTPBP6O43824 516 aaPredicted RBP17.9■□□□□ 0.46
CLNS1A-210ENST00000528364 LGR5O75473 907 aa17.9■□□□□ 0.46
CLNS1A-210ENST00000528364 RSPH10BP0C881 870 aa17.9■□□□□ 0.46
CLNS1A-210ENST00000528364 SMARCA1P28370 1054 aa17.9■□□□□ 0.46
CLNS1A-210ENST00000528364 NEDD9Q14511 834 aa17.9■□□□□ 0.46
CLNS1A-210ENST00000528364 NECTIN1Q15223 517 aa17.9■□□□□ 0.46
CLNS1A-210ENST00000528364 METTL7BQ6UX53 244 aa17.9■□□□□ 0.46
CLNS1A-210ENST00000528364 CUL5Q93034 780 aa17.9■□□□□ 0.46
CLNS1A-210ENST00000528364 MTUS1Q9ULD2 1270 aa17.9■□□□□ 0.46
CLNS1A-210ENST00000528364 FIBPO43427 364 aa17.89■□□□□ 0.45
CLNS1A-210ENST00000528364 ATP9AO75110 1047 aa17.89■□□□□ 0.45
CLNS1A-210ENST00000528364 GJB5O95377 273 aa17.89■□□□□ 0.45
CLNS1A-210ENST00000528364 BMP1P13497 986 aa17.89■□□□□ 0.45
CLNS1A-210ENST00000528364 HOXC8P31273 242 aa17.89■□□□□ 0.45
CLNS1A-210ENST00000528364 KCNQ1P51787 676 aa17.89■□□□□ 0.45
CLNS1A-210ENST00000528364 PCNX4Q63HM2 1172 aa17.89■□□□□ 0.45
CLNS1A-210ENST00000528364 TMTC2Q8N394 836 aa17.89■□□□□ 0.45
CLNS1A-210ENST00000528364 TMEM87BQ96K49 555 aa17.89■□□□□ 0.45
CLNS1A-210ENST00000528364 RAD9AQ99638 391 aa17.89■□□□□ 0.45
CLNS1A-210ENST00000528364 LZTS2Q9BRK4 669 aa17.89■□□□□ 0.45
CLNS1A-210ENST00000528364 USP26Q9BXU7 913 aa17.89■□□□□ 0.45
CLNS1A-210ENST00000528364 TSPYL2Q9H2G4 693 aaPredicted RBP17.89■□□□□ 0.45
CLNS1A-210ENST00000528364 SEC63Q9UGP8 760 aaKnown RBP17.89■□□□□ 0.45
CLNS1A-210ENST00000528364 PIK3CDO00329 1044 aa17.88■□□□□ 0.45
CLNS1A-210ENST00000528364 STAM2O75886 525 aa17.88■□□□□ 0.45
CLNS1A-210ENST00000528364 CTSHP09668 335 aa17.88■□□□□ 0.45
CLNS1A-210ENST00000528364 GNAQP50148 359 aa17.88■□□□□ 0.45
CLNS1A-210ENST00000528364 UBE2SQ16763 222 aa17.88■□□□□ 0.45
CLNS1A-210ENST00000528364 GDPD5Q8WTR4 605 aa17.88■□□□□ 0.45
CLNS1A-210ENST00000528364 UHRF1Q96T88 793 aaPredicted RBP17.88■□□□□ 0.45
CLNS1A-210ENST00000528364 MTA3Q9BTC8 594 aa17.88■□□□□ 0.45
CLNS1A-210ENST00000528364 PSTPIP2Q9H939 334 aa17.88■□□□□ 0.45
CLNS1A-210ENST00000528364 BRWD1Q9NSI6 2320 aa17.87■□□□□ 0.45
CLNS1A-210ENST00000528364 LINC01553A4QN01 128 aa17.87■□□□□ 0.45
CLNS1A-210ENST00000528364 LIFRP42702 1097 aa17.87■□□□□ 0.45
CLNS1A-210ENST00000528364 MKRN4PQ13434 485 aaPredicted RBP17.87■□□□□ 0.45
CLNS1A-210ENST00000528364 FANCBQ8NB91 859 aa17.87■□□□□ 0.45
CLNS1A-210ENST00000528364 SUGCTQ9HAC7 445 aa17.87■□□□□ 0.45
CLNS1A-210ENST00000528364 ANO2Q9NQ90 1003 aa17.87■□□□□ 0.45
CLNS1A-210ENST00000528364 PKD2L1Q9P0L9 805 aa17.87■□□□□ 0.45
CLNS1A-210ENST00000528364 SLC12A7Q9Y666 1083 aa17.87■□□□□ 0.45
CLNS1A-210ENST00000528364 TRANK1O15050 2925 aa17.86■□□□□ 0.45
CLNS1A-210ENST00000528364 ITGB5P18084 799 aa17.86■□□□□ 0.45
CLNS1A-210ENST00000528364 ADAM17P78536 824 aa17.86■□□□□ 0.45
CLNS1A-210ENST00000528364 PLEKHG4Q58EX7 1191 aa17.86■□□□□ 0.45
CLNS1A-210ENST00000528364 XRRA1Q6P2D8 792 aa17.86■□□□□ 0.45
CLNS1A-210ENST00000528364 NLRX1Q86UT6 975 aa17.86■□□□□ 0.45
CLNS1A-210ENST00000528364 MYOCDQ8IZQ8 938 aa17.86■□□□□ 0.45
CLNS1A-210ENST00000528364 IL27Q8NEV9 243 aa17.86■□□□□ 0.45
CLNS1A-210ENST00000528364 TCEANC2Q96MN5 208 aa17.86■□□□□ 0.45
CLNS1A-210ENST00000528364 SENP7Q9BQF6 1050 aa17.86■□□□□ 0.45
CLNS1A-210ENST00000528364 GSTTP1A0A1W2PQM5 241 aa17.85■□□□□ 0.45
CLNS1A-210ENST00000528364 REV3LO60673 3130 aa17.85■□□□□ 0.45
CLNS1A-210ENST00000528364 EFCAB14O75071 495 aa17.85■□□□□ 0.45
CLNS1A-210ENST00000528364 KCNA2P16389 499 aa17.85■□□□□ 0.45
CLNS1A-210ENST00000528364 ERVK-21P61565 698 aa17.85■□□□□ 0.45
CLNS1A-210ENST00000528364 ARHGAP4P98171 946 aa17.85■□□□□ 0.45
CLNS1A-210ENST00000528364 TMTC3Q6ZXV5 915 aa17.85■□□□□ 0.45
CLNS1A-210ENST00000528364 EMSYQ7Z589 1322 aa17.85■□□□□ 0.45
CLNS1A-210ENST00000528364 LMBR1Q8WVP7 490 aa17.85■□□□□ 0.45
CLNS1A-210ENST00000528364 KAT6AQ92794 2004 aa17.85■□□□□ 0.45
CLNS1A-210ENST00000528364 TGS1Q96RS0 853 aaKnown RBP17.85■□□□□ 0.45
CLNS1A-210ENST00000528364 PCDHA6Q9UN73 950 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms