RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 TUT1Q9H6E5 874 aaKnown RBP7.63□□□□□ -1.19
CD44-221ENST00000526000 CLDND1Q9NY35 253 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 LMCD1Q9NZU5 365 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 PKD2L1Q9P0L9 805 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 MAD2L2Q9UI95 211 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 SPTBN5Q9NRC6 3674 aaKnown RBP7.63□□□□□ -1.19
CD44-221ENST00000526000 CHD9Q3L8U1 2897 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 MYO7AQ13402 2215 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.62□□□□□ -1.19
CD44-221ENST00000526000 GRXCR2A6NFK2 248 aa7.62□□□□□ -1.19
CD44-221ENST00000526000 ZBTB5O15062 677 aa7.62□□□□□ -1.19
CD44-221ENST00000526000 EFCAB14O75071 495 aa7.62□□□□□ -1.19
CD44-221ENST00000526000 PARNO95453 639 aaKnown RBP7.62□□□□□ -1.19
CD44-221ENST00000526000 LGALS2P05162 132 aa7.62□□□□□ -1.19
CD44-221ENST00000526000 MARK3P27448 753 aa7.62□□□□□ -1.19
CD44-221ENST00000526000 GTF2F1P35269 517 aaKnown RBP eCLIP7.62□□□□□ -1.19
CD44-221ENST00000526000 RBL2Q08999 1139 aa7.62□□□□□ -1.19
CD44-221ENST00000526000 MAPK8IP2Q13387 824 aaPredicted RBP7.62□□□□□ -1.19
CD44-221ENST00000526000 PTPROQ16827 1216 aa7.62□□□□□ -1.19
CD44-221ENST00000526000 CSPP1Q1MSJ5 1256 aa7.62□□□□□ -1.19
CD44-221ENST00000526000 PLEKHG4Q58EX7 1191 aa7.62□□□□□ -1.19
CD44-221ENST00000526000 USP17L6PQ6QN14 398 aa7.62□□□□□ -1.19
CD44-221ENST00000526000 STOX1Q6ZVD7 989 aa7.62□□□□□ -1.19
CD44-221ENST00000526000 SERINC5Q86VE9 423 aa7.62□□□□□ -1.19
CD44-221ENST00000526000 RAB11FIP4Q86YS3 637 aa7.62□□□□□ -1.19
CD44-221ENST00000526000 TOP1MTQ969P6 601 aa7.62□□□□□ -1.19
CD44-221ENST00000526000 EMID1Q96A84 441 aaPredicted RBP7.62□□□□□ -1.19
CD44-221ENST00000526000 MRPL38Q96DV4 380 aaKnown RBP7.62□□□□□ -1.19
CD44-221ENST00000526000 IFIH1Q9BYX4 1025 aaKnown RBP7.62□□□□□ -1.19
CD44-221ENST00000526000 CTNNA3Q9UI47 895 aa7.62□□□□□ -1.19
CD44-221ENST00000526000 TAF6LQ9Y6J9 622 aa7.62□□□□□ -1.19
CD44-221ENST00000526000 LRRC37A2A6NM11 1700 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 BRWD1Q9NSI6 2320 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 ZMYM6O95789 1325 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 PALM3A6NDB9 673 aaPredicted RBP7.61□□□□□ -1.19
CD44-221ENST00000526000 H3BNC9 293 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 GRM6O15303 877 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 CYTH3O43739 400 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 CHRNA1P02708 482 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 GHRP10912 638 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 CTNNB1P35222 781 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 IGBP1P78318 339 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 MRPS9P82933 396 aaKnown RBP7.61□□□□□ -1.19
CD44-221ENST00000526000 HTRA4P83105 476 aaPredicted RBP7.61□□□□□ -1.19
CD44-221ENST00000526000 PTH1RQ03431 593 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 DLX2Q07687 328 aaPredicted RBP7.61□□□□□ -1.19
CD44-221ENST00000526000 SEMA3FQ13275 785 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 SEC23AQ15436 765 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 KCNV1Q6PIU1 500 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 RUFY4Q6ZNE9 571 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 CMTR1Q8N1G2 835 aaKnown RBP7.61□□□□□ -1.19
CD44-221ENST00000526000 FIBCD1Q8N539 461 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 EXOC6Q8TAG9 804 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 MTMR8Q96EF0 704 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 IL17RAQ96F46 866 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 MYL10Q9BUA6 226 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 DSCC1Q9BVC3 393 aa7.61□□□□□ -1.19
CD44-221ENST00000526000 ALG13Q9NP73 1137 aaKnown RBP7.61□□□□□ -1.19
CD44-221ENST00000526000 PNMA6FA0A0J9YX94 578 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 hCG_1642624A0A1W2PR95 340 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 SPATA31C2B4DYI2 1134 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 ENPP3O14638 875 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 LINC01565O15544 149 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 ATP9AO75110 1047 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 PPFIA3O75145 1194 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 TGFB3P10600 412 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 HOXD8P13378 290 aaPredicted RBP7.6□□□□□ -1.19
CD44-221ENST00000526000 NUCB1Q02818 461 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 TRDNQ13061 729 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 GRM4Q14833 912 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 RPAINQ86UA6 219 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 SMC5Q8IY18 1101 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 CCDC82Q8N4S0 544 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 SMARCC2Q8TAQ2 1214 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 DNAJB3Q8WWF6 145 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 GPR20Q99678 358 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 USP26Q9BXU7 913 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 FAM49AQ9H0Q0 323 aaPredicted RBP7.6□□□□□ -1.19
CD44-221ENST00000526000 CNNM2Q9H8M5 875 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 CHD7Q9P2D1 2997 aa7.6□□□□□ -1.19
CD44-221ENST00000526000 EMSYQ7Z589 1322 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 BAZ2BQ9UIF8 2168 aaKnown RBP7.59□□□□□ -1.19
CD44-221ENST00000526000 ERICH2A1L162 156 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 HIP1O00291 1037 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 GNAT1P11488 350 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 ALADP13716 330 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 RXRAP19793 462 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 BMPR1AP36894 532 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 LTBRP36941 435 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 GATMP50440 423 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 TMEM62Q0P6H9 643 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 HYAL1Q12794 435 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 MKRN4PQ13434 485 aaPredicted RBP7.59□□□□□ -1.19
CD44-221ENST00000526000 BTG3Q14201 252 aaPredicted RBP7.59□□□□□ -1.19
CD44-221ENST00000526000 NEDD9Q14511 834 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 WTAPQ15007 396 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 PAN2Q504Q3 1202 aaKnown RBP7.59□□□□□ -1.19
CD44-221ENST00000526000 RBM23Q86U06 439 aaKnown RBP7.59□□□□□ -1.19
CD44-221ENST00000526000 NEK9Q8TD19 979 aa7.59□□□□□ -1.19
CD44-221ENST00000526000 SP7Q8TDD2 431 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms