RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 H3BRB1 525 aa13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 TREHO43280 583 aa13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 SMIM10L2AP0DMW4 78 aa13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 SMIM10L2BP0DMW5 78 aa13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 HOXC8P31273 242 aa13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 ICAM3P32942 547 aa13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 THPOP40225 353 aa13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 COL9A3Q14050 684 aaPredicted RBP13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 CYFIP1Q7L576 1253 aa13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 ZNF654Q8IZM8 581 aa13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 DBF4BQ8NFT6 615 aa13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 ATP6V0A1Q93050 837 aa13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 INPP4AQ96PE3 977 aaPredicted RBP13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 RAD9AQ99638 391 aa13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 RNPEPQ9H4A4 650 aa13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 TUT1Q9H6E5 874 aaKnown RBP13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 SUGCTQ9HAC7 445 aa13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 LY9Q9HBG7 655 aa13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 MTUS1Q9ULD2 1270 aa13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 RBM8AQ9Y5S9 174 aaKnown RBP13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 LOXHD1Q8IVV2 1947 aa13.56□□□□□ -0.24
NDUFS3-204ENST00000525378 ATG2AQ2TAZ0 1938 aa13.55□□□□□ -0.24
NDUFS3-204ENST00000525378 RSPH10B2B2RC85 870 aa13.55□□□□□ -0.24
NDUFS3-204ENST00000525378 SPATA31C2B4DYI2 1134 aa13.55□□□□□ -0.24
NDUFS3-204ENST00000525378 EFCAB14O75071 495 aa13.55□□□□□ -0.24
NDUFS3-204ENST00000525378 RSPH10BP0C881 870 aa13.55□□□□□ -0.24
NDUFS3-204ENST00000525378 COL9A1P20849 921 aa13.55□□□□□ -0.24
NDUFS3-204ENST00000525378 ERVK-21P61565 698 aa13.55□□□□□ -0.24
NDUFS3-204ENST00000525378 AAK1Q2M2I8 961 aa13.55□□□□□ -0.24
NDUFS3-204ENST00000525378 USP17L6PQ6QN14 398 aa13.55□□□□□ -0.24
NDUFS3-204ENST00000525378 TGS1Q96RS0 853 aaKnown RBP13.55□□□□□ -0.24
NDUFS3-204ENST00000525378 GPR20Q99678 358 aa13.55□□□□□ -0.24
NDUFS3-204ENST00000525378 RAPGEFL1Q9UHV5 662 aa13.55□□□□□ -0.24
NDUFS3-204ENST00000525378 XIRP2A4UGR9 3374 aa13.55□□□□□ -0.24
NDUFS3-204ENST00000525378 BRWD1Q9NSI6 2320 aa13.55□□□□□ -0.24
NDUFS3-204ENST00000525378 NCOR1O75376 2440 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 NOP56O00567 594 aaKnown RBP13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 MEIS2O14770 477 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 FIBPO43427 364 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 STAM2O75886 525 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 PLEKHA8P1O95397 391 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 CTSHP09668 335 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 NEDD9Q14511 834 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 GNPTABQ3T906 1256 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 PLEKHG4Q58EX7 1191 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 METTL7BQ6UX53 244 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 TRIM50Q86XT4 487 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 MYOCDQ8IZQ8 938 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 SRBD1Q8N5C6 995 aaKnown RBP13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 CTCFLQ8NI51 663 aaPredicted RBP13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 SMARCC2Q8TAQ2 1214 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 MAP3K14Q99558 947 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 SPZ1Q9BXG8 430 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 USP26Q9BXU7 913 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 SETD4Q9NVD3 440 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 COG5Q9UP83 839 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 EMSYQ7Z589 1322 aa13.54□□□□□ -0.24
NDUFS3-204ENST00000525378 RALGAPA2Q2PPJ7 1873 aa13.53□□□□□ -0.24
NDUFS3-204ENST00000525378 DDAH1O94760 285 aa13.53□□□□□ -0.24
NDUFS3-204ENST00000525378 RXRAP19793 462 aa13.53□□□□□ -0.24
NDUFS3-204ENST00000525378 SP4Q02446 784 aa13.53□□□□□ -0.24
NDUFS3-204ENST00000525378 UTP14CQ5TAP6 766 aaKnown RBP13.53□□□□□ -0.24
NDUFS3-204ENST00000525378 PCNX4Q63HM2 1172 aa13.53□□□□□ -0.24
NDUFS3-204ENST00000525378 CMTR1Q8N1G2 835 aaKnown RBP13.53□□□□□ -0.24
NDUFS3-204ENST00000525378 HLA-CQ95604 372 aa13.53□□□□□ -0.24
NDUFS3-204ENST00000525378 RRP36Q96EU6 259 aaKnown RBP13.53□□□□□ -0.24
NDUFS3-204ENST00000525378 C17orf80Q9BSJ5 609 aa13.53□□□□□ -0.24
NDUFS3-204ENST00000525378 LMCD1Q9NZU5 365 aa13.53□□□□□ -0.24
NDUFS3-204ENST00000525378 TRANK1O15050 2925 aa13.52□□□□□ -0.24
NDUFS3-204ENST00000525378 PIK3CDO00329 1044 aa13.52□□□□□ -0.25
NDUFS3-204ENST00000525378 SH2B2O14492 632 aaPredicted RBP13.52□□□□□ -0.25
NDUFS3-204ENST00000525378 PRC1O43663 620 aa13.52□□□□□ -0.25
NDUFS3-204ENST00000525378 AMHP03971 560 aa13.52□□□□□ -0.25
NDUFS3-204ENST00000525378 SMARCA1P28370 1054 aa13.52□□□□□ -0.25
NDUFS3-204ENST00000525378 KIF5BP33176 963 aa13.52□□□□□ -0.25
NDUFS3-204ENST00000525378 ADAM17P78536 824 aa13.52□□□□□ -0.25
NDUFS3-204ENST00000525378 HTRA4P83105 476 aaPredicted RBP13.52□□□□□ -0.25
NDUFS3-204ENST00000525378 CASC1Q6TDU7 716 aa13.52□□□□□ -0.25
NDUFS3-204ENST00000525378 RAB11FIP4Q86YS3 637 aa13.52□□□□□ -0.25
NDUFS3-204ENST00000525378 CUL5Q93034 780 aa13.52□□□□□ -0.25
NDUFS3-204ENST00000525378 LSG1Q9H089 658 aaKnown RBP13.52□□□□□ -0.25
NDUFS3-204ENST00000525378 INSL6Q9Y581 213 aa13.52□□□□□ -0.25
NDUFS3-204ENST00000525378 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.51□□□□□ -0.25
NDUFS3-204ENST00000525378 hCG_1642624A0A1W2PR95 340 aa13.51□□□□□ -0.25
NDUFS3-204ENST00000525378 SLC27A2O14975 620 aa13.51□□□□□ -0.25
NDUFS3-204ENST00000525378 ATP9AO75110 1047 aa13.51□□□□□ -0.25
NDUFS3-204ENST00000525378 ARHGAP4P98171 946 aa13.51□□□□□ -0.25
NDUFS3-204ENST00000525378 NFXL1Q6ZNB6 911 aa13.51□□□□□ -0.25
NDUFS3-204ENST00000525378 SP7Q8TDD2 431 aaPredicted RBP13.51□□□□□ -0.25
NDUFS3-204ENST00000525378 SEPT8Q92599 483 aa13.51□□□□□ -0.25
NDUFS3-204ENST00000525378 SENP7Q9BQF6 1050 aa13.51□□□□□ -0.25
NDUFS3-204ENST00000525378 MTA3Q9BTC8 594 aa13.51□□□□□ -0.25
NDUFS3-204ENST00000525378 SEC63Q9UGP8 760 aaKnown RBP13.51□□□□□ -0.25
NDUFS3-204ENST00000525378 CCDC69A6NI79 296 aa13.5□□□□□ -0.25
NDUFS3-204ENST00000525378 CAND2O75155 1236 aa13.5□□□□□ -0.25
NDUFS3-204ENST00000525378 UPP2O95045 317 aa13.5□□□□□ -0.25
NDUFS3-204ENST00000525378 GNAT1P11488 350 aa13.5□□□□□ -0.25
NDUFS3-204ENST00000525378 KCNA2P16389 499 aa13.5□□□□□ -0.25
NDUFS3-204ENST00000525378 MCM5P33992 734 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms