RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 BCAS3Q9H6U6 928 aa26.4■■□□□ 1.82
PVT1-218ENST00000523328 CNNM2Q9H8M5 875 aa26.4■■□□□ 1.82
PVT1-218ENST00000523328 MYO7AQ13402 2215 aa26.4■■□□□ 1.82
PVT1-218ENST00000523328 RALGAPA2Q2PPJ7 1873 aa26.39■■□□□ 1.82
PVT1-218ENST00000523328 PALM3A6NDB9 673 aaPredicted RBP26.39■■□□□ 1.82
PVT1-218ENST00000523328 GRXCR2A6NFK2 248 aa26.39■■□□□ 1.82
PVT1-218ENST00000523328 TREHO43280 583 aa26.39■■□□□ 1.82
PVT1-218ENST00000523328 LGALS2P05162 132 aa26.39■■□□□ 1.82
PVT1-218ENST00000523328 SMIM10L2AP0DMW4 78 aa26.39■■□□□ 1.82
PVT1-218ENST00000523328 SMIM10L2BP0DMW5 78 aa26.39■■□□□ 1.82
PVT1-218ENST00000523328 CCND2P30279 289 aa26.39■■□□□ 1.82
PVT1-218ENST00000523328 B4GALNT3Q6L9W6 998 aa26.39■■□□□ 1.82
PVT1-218ENST00000523328 NEK9Q8TD19 979 aa26.39■■□□□ 1.82
PVT1-218ENST00000523328 TOP1MTQ969P6 601 aa26.39■■□□□ 1.82
PVT1-218ENST00000523328 SAMD11Q96NU1 681 aa26.39■■□□□ 1.82
PVT1-218ENST00000523328 RNPEPQ9H4A4 650 aa26.39■■□□□ 1.82
PVT1-218ENST00000523328 MLXIPQ9HAP2 919 aa26.39■■□□□ 1.82
PVT1-218ENST00000523328 CTNNA3Q9UI47 895 aa26.39■■□□□ 1.82
PVT1-218ENST00000523328 ATG2AQ2TAZ0 1938 aa26.38■■□□□ 1.81
PVT1-218ENST00000523328 PTPROQ16827 1216 aa26.38■■□□□ 1.81
PVT1-218ENST00000523328 SEPT8Q92599 483 aa26.38■■□□□ 1.81
PVT1-218ENST00000523328 PIEZO1Q92508 2521 aa26.37■■□□□ 1.81
PVT1-218ENST00000523328 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.37■■□□□ 1.81
PVT1-218ENST00000523328 PRR33A8MZF0 331 aa26.37■■□□□ 1.81
PVT1-218ENST00000523328 H3BNC9 293 aa26.37■■□□□ 1.81
PVT1-218ENST00000523328 HIP1O00291 1037 aa26.37■■□□□ 1.81
PVT1-218ENST00000523328 CYB5R4Q7L1T6 521 aa26.37■■□□□ 1.81
PVT1-218ENST00000523328 CHD1LQ86WJ1 897 aa26.37■■□□□ 1.81
PVT1-218ENST00000523328 GCOM1H8Y6P7 765 aaPredicted RBP26.36■■□□□ 1.81
PVT1-218ENST00000523328 CAND2O75155 1236 aa26.36■■□□□ 1.81
PVT1-218ENST00000523328 CTSHP09668 335 aa26.36■■□□□ 1.81
PVT1-218ENST00000523328 POLR2MP0CAP2 368 aa26.36■■□□□ 1.81
PVT1-218ENST00000523328 TIGD5Q53EQ6 642 aa26.36■■□□□ 1.81
PVT1-218ENST00000523328 FCHSD1Q86WN1 690 aa26.36■■□□□ 1.81
PVT1-218ENST00000523328 HOMER1Q86YM7 354 aa26.36■■□□□ 1.81
PVT1-218ENST00000523328 PIGSQ96S52 555 aa26.36■■□□□ 1.81
PVT1-218ENST00000523328 YME1L1Q96TA2 773 aa26.36■■□□□ 1.81
PVT1-218ENST00000523328 IL25Q9H293 177 aa26.36■■□□□ 1.81
PVT1-218ENST00000523328 RIOX1Q9H6W3 641 aa26.36■■□□□ 1.81
PVT1-218ENST00000523328 KAT6AQ92794 2004 aa26.36■■□□□ 1.81
PVT1-218ENST00000523328 UPP2O95045 317 aa26.35■■□□□ 1.81
PVT1-218ENST00000523328 SSTR3P32745 418 aaPredicted RBP26.35■■□□□ 1.81
PVT1-218ENST00000523328 MRPS9P82933 396 aaKnown RBP26.35■■□□□ 1.81
PVT1-218ENST00000523328 GPM6BQ13491 265 aa26.35■■□□□ 1.81
PVT1-218ENST00000523328 COL19A1Q14993 1142 aa26.35■■□□□ 1.81
PVT1-218ENST00000523328 PUS10Q3MIT2 529 aaKnown RBP26.35■■□□□ 1.81
PVT1-218ENST00000523328 TMEM192Q8IY95 271 aa26.35■■□□□ 1.81
PVT1-218ENST00000523328 BANK1Q8NDB2 785 aa26.35■■□□□ 1.81
PVT1-218ENST00000523328 H3BQ06 376 aaPredicted RBP26.34■■□□□ 1.81
PVT1-218ENST00000523328 ICAM3P32942 547 aa26.34■■□□□ 1.81
PVT1-218ENST00000523328 NUCB1Q02818 461 aa26.34■■□□□ 1.81
PVT1-218ENST00000523328 TCEAL5Q5H9L2 206 aa26.34■■□□□ 1.81
PVT1-218ENST00000523328 INPP4AQ96PE3 977 aaPredicted RBP26.34■■□□□ 1.81
PVT1-218ENST00000523328 USP26Q9BXU7 913 aa26.34■■□□□ 1.81
PVT1-218ENST00000523328 FRMPD4Q14CM0 1322 aa26.34■■□□□ 1.81
PVT1-218ENST00000523328 NOP56O00567 594 aaKnown RBP26.33■■□□□ 1.81
PVT1-218ENST00000523328 CYTH3O43739 400 aa26.33■■□□□ 1.81
PVT1-218ENST00000523328 ADAM17P78536 824 aa26.33■■□□□ 1.81
PVT1-218ENST00000523328 SEMA3FQ13275 785 aa26.33■■□□□ 1.81
PVT1-218ENST00000523328 GRM4Q14833 912 aa26.33■■□□□ 1.81
PVT1-218ENST00000523328 METTL7BQ6UX53 244 aa26.33■■□□□ 1.81
PVT1-218ENST00000523328 PABPC5Q96DU9 382 aaKnown RBP26.33■■□□□ 1.81
PVT1-218ENST00000523328 SETD4Q9NVD3 440 aa26.33■■□□□ 1.81
PVT1-218ENST00000523328 ALADP13716 330 aa26.32■■□□□ 1.8
PVT1-218ENST00000523328 TRAF1Q13077 416 aa26.32■■□□□ 1.8
PVT1-218ENST00000523328 CYFIP1Q7L576 1253 aa26.32■■□□□ 1.8
PVT1-218ENST00000523328 GPR20Q99678 358 aa26.32■■□□□ 1.8
PVT1-218ENST00000523328 IFIH1Q9BYX4 1025 aaKnown RBP26.32■■□□□ 1.8
PVT1-218ENST00000523328 RWDD1Q9H446 243 aaPredicted RBP26.32■■□□□ 1.8
PVT1-218ENST00000523328 SPATA31C2B4DYI2 1134 aa26.31■■□□□ 1.8
PVT1-218ENST00000523328 IGHDP01880 384 aa26.31■■□□□ 1.8
PVT1-218ENST00000523328 NEDD9Q14511 834 aa26.31■■□□□ 1.8
PVT1-218ENST00000523328 GNPTABQ3T906 1256 aa26.31■■□□□ 1.8
PVT1-218ENST00000523328 FAM26DQ5JW98 314 aa26.31■■□□□ 1.8
PVT1-218ENST00000523328 TRIM50Q86XT4 487 aa26.31■■□□□ 1.8
PVT1-218ENST00000523328 APBB2Q92870 758 aa26.31■■□□□ 1.8
PVT1-218ENST00000523328 NSUN3Q9H649 340 aaKnown RBP26.31■■□□□ 1.8
PVT1-218ENST00000523328 TELO2Q9Y4R8 837 aa26.31■■□□□ 1.8
PVT1-218ENST00000523328 PNMA6FA0A0J9YX94 578 aa26.3■■□□□ 1.8
PVT1-218ENST00000523328 STAM2O75886 525 aa26.3■■□□□ 1.8
PVT1-218ENST00000523328 GNAT1P11488 350 aa26.3■■□□□ 1.8
PVT1-218ENST00000523328 AAMPQ13685 434 aa26.3■■□□□ 1.8
PVT1-218ENST00000523328 SENP2Q9HC62 589 aa26.3■■□□□ 1.8
PVT1-218ENST00000523328 LINC00271P0C7V0 271 aa26.29■■□□□ 1.8
PVT1-218ENST00000523328 RTEL1Q9NZ71 1219 aa26.29■■□□□ 1.8
PVT1-218ENST00000523328 POTEB3A0JP26 581 aa26.28■■□□□ 1.8
PVT1-218ENST00000523328 FIBPO43427 364 aa26.28■■□□□ 1.8
PVT1-218ENST00000523328 ZP2Q05996 745 aa26.28■■□□□ 1.8
PVT1-218ENST00000523328 TROAPQ12815 778 aa26.28■■□□□ 1.8
PVT1-218ENST00000523328 POTEBQ6S5H4 581 aa26.28■■□□□ 1.8
PVT1-218ENST00000523328 LMBR1Q8WVP7 490 aa26.28■■□□□ 1.8
PVT1-218ENST00000523328 C5orf42Q9H799 3197 aa26.28■■□□□ 1.8
PVT1-218ENST00000523328 C5orf67F2Z3F1 127 aa26.27■■□□□ 1.8
PVT1-218ENST00000523328 DCXO43602 365 aa26.27■■□□□ 1.8
PVT1-218ENST00000523328 LTBRP36941 435 aa26.27■■□□□ 1.8
PVT1-218ENST00000523328 ARHGAP4P98171 946 aa26.27■■□□□ 1.8
PVT1-218ENST00000523328 EP400NLQ6ZTU2 488 aa26.27■■□□□ 1.8
PVT1-218ENST00000523328 IL17RAQ96F46 866 aa26.27■■□□□ 1.8
PVT1-218ENST00000523328 CLDND1Q9NY35 253 aa26.27■■□□□ 1.8
PVT1-218ENST00000523328 PRKAG3Q9UGI9 489 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms