RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 POLR2MP0CAP2 368 aa17.72■□□□□ 0.43
TRAPPC9-213ENST00000522504 TGFB3P10600 412 aa17.72■□□□□ 0.43
TRAPPC9-213ENST00000522504 KCNA5P22460 613 aa17.72■□□□□ 0.43
TRAPPC9-213ENST00000522504 MRPS9P82933 396 aaKnown RBP17.72■□□□□ 0.43
TRAPPC9-213ENST00000522504 SEMA3FQ13275 785 aa17.72■□□□□ 0.43
TRAPPC9-213ENST00000522504 GRM4Q14833 912 aa17.72■□□□□ 0.43
TRAPPC9-213ENST00000522504 FBXO22Q8NEZ5 403 aa17.72■□□□□ 0.43
TRAPPC9-213ENST00000522504 ATP6V0A1Q93050 837 aa17.72■□□□□ 0.43
TRAPPC9-213ENST00000522504 RNPEPQ9H4A4 650 aa17.72■□□□□ 0.43
TRAPPC9-213ENST00000522504 TUT1Q9H6E5 874 aaKnown RBP17.72■□□□□ 0.43
TRAPPC9-213ENST00000522504 RIOX1Q9H6W3 641 aa17.72■□□□□ 0.43
TRAPPC9-213ENST00000522504 MLXIPQ9HAP2 919 aa17.72■□□□□ 0.43
TRAPPC9-213ENST00000522504 AMHP03971 560 aa17.71■□□□□ 0.43
TRAPPC9-213ENST00000522504 LGALS2P05162 132 aa17.71■□□□□ 0.43
TRAPPC9-213ENST00000522504 CTSHP09668 335 aa17.71■□□□□ 0.43
TRAPPC9-213ENST00000522504 CCND2P30279 289 aa17.71■□□□□ 0.43
TRAPPC9-213ENST00000522504 LEXMQ3ZCV2 418 aa17.71■□□□□ 0.43
TRAPPC9-213ENST00000522504 SIP14410 1827 aa17.7■□□□□ 0.42
TRAPPC9-213ENST00000522504 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC9-213ENST00000522504 PI4K2BG5E9Z4 385 aa17.7■□□□□ 0.42
TRAPPC9-213ENST00000522504 GPR37L1O60883 481 aa17.7■□□□□ 0.42
TRAPPC9-213ENST00000522504 IL9P15248 144 aa17.7■□□□□ 0.42
TRAPPC9-213ENST00000522504 HOXD11P31277 338 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC9-213ENST00000522504 EPC2Q52LR7 807 aa17.7■□□□□ 0.42
TRAPPC9-213ENST00000522504 TRIM50Q86XT4 487 aa17.7■□□□□ 0.42
TRAPPC9-213ENST00000522504 FAM178BQ8IXR5 827 aa17.7■□□□□ 0.42
TRAPPC9-213ENST00000522504 SAMD3Q8N6K7 520 aa17.7■□□□□ 0.42
TRAPPC9-213ENST00000522504 SETD4Q9NVD3 440 aa17.7■□□□□ 0.42
TRAPPC9-213ENST00000522504 BAZ2BQ9UIF8 2168 aaKnown RBP17.7■□□□□ 0.42
TRAPPC9-213ENST00000522504 SPATA31C2B4DYI2 1134 aa17.69■□□□□ 0.42
TRAPPC9-213ENST00000522504 CYP21A2P08686 494 aa17.69■□□□□ 0.42
TRAPPC9-213ENST00000522504 PTH1RQ03431 593 aa17.69■□□□□ 0.42
TRAPPC9-213ENST00000522504 TROAPQ12815 778 aa17.69■□□□□ 0.42
TRAPPC9-213ENST00000522504 CYFIP1Q7L576 1253 aa17.69■□□□□ 0.42
TRAPPC9-213ENST00000522504 EXOC6Q8TAG9 804 aa17.69■□□□□ 0.42
TRAPPC9-213ENST00000522504 TOP1MTQ969P6 601 aa17.69■□□□□ 0.42
TRAPPC9-213ENST00000522504 MRPL38Q96DV4 380 aaKnown RBP17.69■□□□□ 0.42
TRAPPC9-213ENST00000522504 INPP4AQ96PE3 977 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC9-213ENST00000522504 GPR20Q99678 358 aa17.69■□□□□ 0.42
TRAPPC9-213ENST00000522504 RTEL1Q9NZ71 1219 aa17.69■□□□□ 0.42
TRAPPC9-213ENST00000522504 SUPT16HQ9Y5B9 1047 aaKnown RBP17.69■□□□□ 0.42
TRAPPC9-213ENST00000522504 FRMPD4Q14CM0 1322 aa17.69■□□□□ 0.42
TRAPPC9-213ENST00000522504 PNMA6FA0A0J9YX94 578 aa17.68■□□□□ 0.42
TRAPPC9-213ENST00000522504 UPP2O95045 317 aa17.68■□□□□ 0.42
TRAPPC9-213ENST00000522504 GSPT1P15170 499 aaKnown RBP17.68■□□□□ 0.42
TRAPPC9-213ENST00000522504 PDE4AP27815 886 aa17.68■□□□□ 0.42
TRAPPC9-213ENST00000522504 ICAM3P32942 547 aa17.68■□□□□ 0.42
TRAPPC9-213ENST00000522504 AAMPQ13685 434 aa17.68■□□□□ 0.42
TRAPPC9-213ENST00000522504 MICAL3Q7RTP6 2002 aa17.68■□□□□ 0.42
TRAPPC9-213ENST00000522504 GJD3Q8N144 294 aa17.68■□□□□ 0.42
TRAPPC9-213ENST00000522504 PIBF1Q8WXW3 757 aa17.68■□□□□ 0.42
TRAPPC9-213ENST00000522504 SEPT8Q92599 483 aa17.68■□□□□ 0.42
TRAPPC9-213ENST00000522504 PIEZO1Q92508 2521 aa17.67■□□□□ 0.42
TRAPPC9-213ENST00000522504 MUC6Q6W4X9 2439 aa17.67■□□□□ 0.42
TRAPPC9-213ENST00000522504 GRXCR2A6NFK2 248 aa17.67■□□□□ 0.42
TRAPPC9-213ENST00000522504 H3BQ06 376 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC9-213ENST00000522504 IFIT3O14879 490 aaKnown RBP17.67■□□□□ 0.42
TRAPPC9-213ENST00000522504 ADAM17P78536 824 aa17.67■□□□□ 0.42
TRAPPC9-213ENST00000522504 PTCRAQ6ISU1 281 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC9-213ENST00000522504 METTL7BQ6UX53 244 aa17.67■□□□□ 0.42
TRAPPC9-213ENST00000522504 NEK9Q8TD19 979 aa17.67■□□□□ 0.42
TRAPPC9-213ENST00000522504 YME1L1Q96TA2 773 aa17.67■□□□□ 0.42
TRAPPC9-213ENST00000522504 USP26Q9BXU7 913 aa17.67■□□□□ 0.42
TRAPPC9-213ENST00000522504 HCN4Q9Y3Q4 1203 aa17.67■□□□□ 0.42
TRAPPC9-213ENST00000522504 ARIH1Q9Y4X5 557 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC9-213ENST00000522504 MYO7AQ13402 2215 aa17.66■□□□□ 0.42
TRAPPC9-213ENST00000522504 H3BNC9 293 aa17.66■□□□□ 0.42
TRAPPC9-213ENST00000522504 NOP56O00567 594 aaKnown RBP17.66■□□□□ 0.42
TRAPPC9-213ENST00000522504 GPM6BQ13491 265 aa17.66■□□□□ 0.42
TRAPPC9-213ENST00000522504 TCEAL5Q5H9L2 206 aa17.66■□□□□ 0.42
TRAPPC9-213ENST00000522504 UTP14CQ5TAP6 766 aaKnown RBP17.66■□□□□ 0.42
TRAPPC9-213ENST00000522504 USP17L6PQ6QN14 398 aa17.66■□□□□ 0.42
TRAPPC9-213ENST00000522504 TMEM192Q8IY95 271 aa17.66■□□□□ 0.42
TRAPPC9-213ENST00000522504 LMBR1Q8WVP7 490 aa17.66■□□□□ 0.42
TRAPPC9-213ENST00000522504 CAND2O75155 1236 aa17.65■□□□□ 0.42
TRAPPC9-213ENST00000522504 CHRNA1P02708 482 aa17.65■□□□□ 0.42
TRAPPC9-213ENST00000522504 LINC00271P0C7V0 271 aa17.65■□□□□ 0.42
TRAPPC9-213ENST00000522504 ANTXR2P58335 489 aa17.65■□□□□ 0.42
TRAPPC9-213ENST00000522504 SP4Q02446 784 aa17.65■□□□□ 0.42
TRAPPC9-213ENST00000522504 NEDD9Q14511 834 aa17.65■□□□□ 0.42
TRAPPC9-213ENST00000522504 COL19A1Q14993 1142 aa17.65■□□□□ 0.42
TRAPPC9-213ENST00000522504 GNPTABQ3T906 1256 aa17.65■□□□□ 0.42
TRAPPC9-213ENST00000522504 FAM26DQ5JW98 314 aa17.65■□□□□ 0.42
TRAPPC9-213ENST00000522504 RUFY4Q6ZNE9 571 aa17.65■□□□□ 0.42
TRAPPC9-213ENST00000522504 BANK1Q8NDB2 785 aa17.65■□□□□ 0.42
TRAPPC9-213ENST00000522504 IFIH1Q9BYX4 1025 aaKnown RBP17.65■□□□□ 0.42
TRAPPC9-213ENST00000522504 E7EWF7 191 aa17.64■□□□□ 0.41
TRAPPC9-213ENST00000522504 FIBPO43427 364 aa17.64■□□□□ 0.41
TRAPPC9-213ENST00000522504 SSTR3P32745 418 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC9-213ENST00000522504 ARHGAP4P98171 946 aa17.64■□□□□ 0.41
TRAPPC9-213ENST00000522504 TRDNQ13061 729 aa17.64■□□□□ 0.41
TRAPPC9-213ENST00000522504 WTAPQ15007 396 aa17.64■□□□□ 0.41
TRAPPC9-213ENST00000522504 PTPROQ16827 1216 aa17.64■□□□□ 0.41
TRAPPC9-213ENST00000522504 TTC22Q5TAA0 569 aa17.64■□□□□ 0.41
TRAPPC9-213ENST00000522504 IGDCC4Q8TDY8 1250 aa17.64■□□□□ 0.41
TRAPPC9-213ENST00000522504 SAMD11Q96NU1 681 aa17.64■□□□□ 0.41
TRAPPC9-213ENST00000522504 MEIS2O14770 477 aa17.63■□□□□ 0.41
TRAPPC9-213ENST00000522504 STAM2O75886 525 aa17.63■□□□□ 0.41
TRAPPC9-213ENST00000522504 TRAF1Q13077 416 aa17.63■□□□□ 0.41
TRAPPC9-213ENST00000522504 COL9A3Q14050 684 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms