RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 GPKOWQ92917 476 aaPredicted RBP eCLIP17.22■□□□□ 0.35
PRKDC-204ENST00000521331 INPP4AQ96PE3 977 aaPredicted RBP17.22■□□□□ 0.35
PRKDC-204ENST00000521331 UBE2ZQ9H832 354 aaPredicted RBP17.22■□□□□ 0.35
PRKDC-204ENST00000521331 TCF20Q9UGU0 1960 aaKnown RBP17.22■□□□□ 0.35
PRKDC-204ENST00000521331 FRMPD4Q14CM0 1322 aa17.21■□□□□ 0.35
PRKDC-204ENST00000521331 CYTH3O43739 400 aa17.21■□□□□ 0.35
PRKDC-204ENST00000521331 CYP21A2P08686 494 aa17.21■□□□□ 0.35
PRKDC-204ENST00000521331 TROAPQ12815 778 aa17.21■□□□□ 0.35
PRKDC-204ENST00000521331 WTAPQ15007 396 aa17.21■□□□□ 0.35
PRKDC-204ENST00000521331 RALYLQ86SE5 291 aaKnown RBP17.21■□□□□ 0.35
PRKDC-204ENST00000521331 EXOC6Q8TAG9 804 aa17.21■□□□□ 0.35
PRKDC-204ENST00000521331 SP7Q8TDD2 431 aaPredicted RBP17.21■□□□□ 0.35
PRKDC-204ENST00000521331 SEPT8Q92599 483 aa17.21■□□□□ 0.35
PRKDC-204ENST00000521331 FAM122AQ96E09 287 aa17.21■□□□□ 0.35
PRKDC-204ENST00000521331 SAMD11Q96NU1 681 aa17.21■□□□□ 0.35
PRKDC-204ENST00000521331 EPHX3Q9H6B9 360 aa17.21■□□□□ 0.35
PRKDC-204ENST00000521331 PTPRSQ13332 1948 aa17.21■□□□□ 0.35
PRKDC-204ENST00000521331 COL4A4P53420 1690 aaPredicted RBP17.2■□□□□ 0.34
PRKDC-204ENST00000521331 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.2■□□□□ 0.34
PRKDC-204ENST00000521331 TREHO43280 583 aa17.2■□□□□ 0.34
PRKDC-204ENST00000521331 FIBPO43427 364 aa17.2■□□□□ 0.34
PRKDC-204ENST00000521331 CATIPQ7Z7H3 387 aa17.2■□□□□ 0.34
PRKDC-204ENST00000521331 NCOA7Q8NI08 942 aa17.2■□□□□ 0.34
PRKDC-204ENST00000521331 ZFP91Q96JP5 570 aaPredicted RBP17.2■□□□□ 0.34
PRKDC-204ENST00000521331 C17orf80Q9BSJ5 609 aa17.2■□□□□ 0.34
PRKDC-204ENST00000521331 RNPEPQ9H4A4 650 aa17.2■□□□□ 0.34
PRKDC-204ENST00000521331 ZNF215Q9UL58 517 aaPredicted RBP17.2■□□□□ 0.34
PRKDC-204ENST00000521331 MYH6P13533 1939 aa17.19■□□□□ 0.34
PRKDC-204ENST00000521331 BRWD1Q9NSI6 2320 aa17.19■□□□□ 0.34
PRKDC-204ENST00000521331 SPATA31C2B4DYI2 1134 aa17.19■□□□□ 0.34
PRKDC-204ENST00000521331 GSPT1P15170 499 aaKnown RBP17.19■□□□□ 0.34
PRKDC-204ENST00000521331 MRPS9P82933 396 aaKnown RBP17.19■□□□□ 0.34
PRKDC-204ENST00000521331 PTPROQ16827 1216 aa17.19■□□□□ 0.34
PRKDC-204ENST00000521331 LEXMQ3ZCV2 418 aa17.19■□□□□ 0.34
PRKDC-204ENST00000521331 TMEM31Q5JXX7 168 aa17.19■□□□□ 0.34
PRKDC-204ENST00000521331 TTC22Q5TAA0 569 aa17.19■□□□□ 0.34
PRKDC-204ENST00000521331 XRRA1Q6P2D8 792 aa17.19■□□□□ 0.34
PRKDC-204ENST00000521331 CYFIP1Q7L576 1253 aa17.19■□□□□ 0.34
PRKDC-204ENST00000521331 MRPL38Q96DV4 380 aaKnown RBP17.19■□□□□ 0.34
PRKDC-204ENST00000521331 YME1L1Q96TA2 773 aa17.19■□□□□ 0.34
PRKDC-204ENST00000521331 GPR20Q99678 358 aa17.19■□□□□ 0.34
PRKDC-204ENST00000521331 ARIH1Q9Y4X5 557 aaPredicted RBP17.19■□□□□ 0.34
PRKDC-204ENST00000521331 E7EWF7 191 aa17.18■□□□□ 0.34
PRKDC-204ENST00000521331 CTSHP09668 335 aa17.18■□□□□ 0.34
PRKDC-204ENST00000521331 TIGD5Q53EQ6 642 aa17.18■□□□□ 0.34
PRKDC-204ENST00000521331 APBB2Q92870 758 aa17.18■□□□□ 0.34
PRKDC-204ENST00000521331 CUL5Q93034 780 aa17.18■□□□□ 0.34
PRKDC-204ENST00000521331 TOP1MTQ969P6 601 aa17.18■□□□□ 0.34
PRKDC-204ENST00000521331 MAP3K14Q99558 947 aa17.18■□□□□ 0.34
PRKDC-204ENST00000521331 SENP7Q9BQF6 1050 aa17.18■□□□□ 0.34
PRKDC-204ENST00000521331 LRFN3Q9BTN0 628 aa17.18■□□□□ 0.34
PRKDC-204ENST00000521331 BCAS3Q9H6U6 928 aa17.18■□□□□ 0.34
PRKDC-204ENST00000521331 SENP2Q9HC62 589 aa17.18■□□□□ 0.34
PRKDC-204ENST00000521331 SETD4Q9NVD3 440 aa17.18■□□□□ 0.34
PRKDC-204ENST00000521331 HCN4Q9Y3Q4 1203 aa17.18■□□□□ 0.34
PRKDC-204ENST00000521331 KCNA5P22460 613 aa17.17■□□□□ 0.34
PRKDC-204ENST00000521331 PTH1RQ03431 593 aa17.17■□□□□ 0.34
PRKDC-204ENST00000521331 SEMA3FQ13275 785 aa17.17■□□□□ 0.34
PRKDC-204ENST00000521331 EPC2Q52LR7 807 aa17.17■□□□□ 0.34
PRKDC-204ENST00000521331 PCNX4Q63HM2 1172 aa17.17■□□□□ 0.34
PRKDC-204ENST00000521331 RTEL1Q9NZ71 1219 aa17.17■□□□□ 0.34
PRKDC-204ENST00000521331 PIK3CDO00329 1044 aa17.16■□□□□ 0.34
PRKDC-204ENST00000521331 GPR37L1O60883 481 aa17.16■□□□□ 0.34
PRKDC-204ENST00000521331 CHMLP26374 656 aa17.16■□□□□ 0.34
PRKDC-204ENST00000521331 KIF5BP33176 963 aa17.16■□□□□ 0.34
PRKDC-204ENST00000521331 PUS10Q3MIT2 529 aaKnown RBP17.16■□□□□ 0.34
PRKDC-204ENST00000521331 FAM26DQ5JW98 314 aa17.16■□□□□ 0.34
PRKDC-204ENST00000521331 NLRX1Q86UT6 975 aa17.16■□□□□ 0.34
PRKDC-204ENST00000521331 TRIM50Q86XT4 487 aa17.16■□□□□ 0.34
PRKDC-204ENST00000521331 GIMAP8Q8ND71 665 aaPredicted RBP17.16■□□□□ 0.34
PRKDC-204ENST00000521331 CTCFLQ8NI51 663 aaPredicted RBP17.16■□□□□ 0.34
PRKDC-204ENST00000521331 SMARCC2Q8TAQ2 1214 aa17.16■□□□□ 0.34
PRKDC-204ENST00000521331 PIBF1Q8WXW3 757 aa17.16■□□□□ 0.34
PRKDC-204ENST00000521331 RRP36Q96EU6 259 aaKnown RBP17.16■□□□□ 0.34
PRKDC-204ENST00000521331 SPZ1Q9BXG8 430 aa17.16■□□□□ 0.34
PRKDC-204ENST00000521331 NRCAMQ92823 1304 aa17.16■□□□□ 0.34
PRKDC-204ENST00000521331 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.15■□□□□ 0.34
PRKDC-204ENST00000521331 PI4K2BG5E9Z4 385 aa17.15■□□□□ 0.34
PRKDC-204ENST00000521331 H3BNC9 293 aa17.15■□□□□ 0.34
PRKDC-204ENST00000521331 DDAH1O94760 285 aa17.15■□□□□ 0.34
PRKDC-204ENST00000521331 PDE4AP27815 886 aa17.15■□□□□ 0.34
PRKDC-204ENST00000521331 SMARCA1P28370 1054 aa17.15■□□□□ 0.34
PRKDC-204ENST00000521331 ADAM17P78536 824 aa17.15■□□□□ 0.34
PRKDC-204ENST00000521331 ARHGAP4P98171 946 aa17.15■□□□□ 0.34
PRKDC-204ENST00000521331 UTP14CQ5TAP6 766 aaKnown RBP17.15■□□□□ 0.34
PRKDC-204ENST00000521331 FAM178BQ8IXR5 827 aa17.15■□□□□ 0.34
PRKDC-204ENST00000521331 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.15■□□□□ 0.34
PRKDC-204ENST00000521331 IGDCC4Q8TDY8 1250 aa17.15■□□□□ 0.34
PRKDC-204ENST00000521331 LMBR1Q8WVP7 490 aa17.15■□□□□ 0.34
PRKDC-204ENST00000521331 CDHR1Q96JP9 859 aa17.15■□□□□ 0.34
PRKDC-204ENST00000521331 LZTS2Q9BRK4 669 aa17.15■□□□□ 0.34
PRKDC-204ENST00000521331 IFIH1Q9BYX4 1025 aaKnown RBP17.15■□□□□ 0.34
PRKDC-204ENST00000521331 SEC63Q9UGP8 760 aaKnown RBP17.15■□□□□ 0.34
PRKDC-204ENST00000521331 TAF6LQ9Y6J9 622 aa17.15■□□□□ 0.34
PRKDC-204ENST00000521331 MYH7BA7E2Y1 1941 aa17.15■□□□□ 0.34
PRKDC-204ENST00000521331 COL4A6Q14031 1691 aa17.14■□□□□ 0.33
PRKDC-204ENST00000521331 UPP2O95045 317 aa17.14■□□□□ 0.33
PRKDC-204ENST00000521331 GNAQP50148 359 aa17.14■□□□□ 0.33
PRKDC-204ENST00000521331 ANTXR2P58335 489 aa17.14■□□□□ 0.33
PRKDC-204ENST00000521331 GPM6BQ13491 265 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms