RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 TREHO43280 583 aa13.33□□□□□ -0.28
MRPS28-206ENST00000520946 CAND2O75155 1236 aa13.33□□□□□ -0.28
MRPS28-206ENST00000520946 UBA1P22314 1058 aaKnown RBP13.33□□□□□ -0.28
MRPS28-206ENST00000520946 CTNNB1P35222 781 aa13.33□□□□□ -0.28
MRPS28-206ENST00000520946 TRDNQ13061 729 aa13.33□□□□□ -0.28
MRPS28-206ENST00000520946 NEDD9Q14511 834 aa13.33□□□□□ -0.28
MRPS28-206ENST00000520946 PGM5Q15124 567 aa13.33□□□□□ -0.28
MRPS28-206ENST00000520946 VSIG10LQ86VR7 867 aa13.33□□□□□ -0.28
MRPS28-206ENST00000520946 ENAHQ8N8S7 591 aaPredicted RBP13.33□□□□□ -0.28
MRPS28-206ENST00000520946 NEK9Q8TD19 979 aa13.33□□□□□ -0.28
MRPS28-206ENST00000520946 ANKS1AQ92625 1134 aa13.33□□□□□ -0.28
MRPS28-206ENST00000520946 TOP1MTQ969P6 601 aa13.33□□□□□ -0.28
MRPS28-206ENST00000520946 ZFP91Q96JP5 570 aaPredicted RBP13.33□□□□□ -0.28
MRPS28-206ENST00000520946 POP1Q99575 1024 aaKnown RBP13.33□□□□□ -0.28
MRPS28-206ENST00000520946 PRKAG3Q9UGI9 489 aa13.33□□□□□ -0.28
MRPS28-206ENST00000520946 RWDD3Q9Y3V2 267 aa13.33□□□□□ -0.28
MRPS28-206ENST00000520946 CHD7Q9P2D1 2997 aa13.33□□□□□ -0.28
MRPS28-206ENST00000520946 MYH7BA7E2Y1 1941 aa13.33□□□□□ -0.28
MRPS28-206ENST00000520946 KIAA1217Q5T5P2 1943 aa13.33□□□□□ -0.28
MRPS28-206ENST00000520946 SIP14410 1827 aa13.32□□□□□ -0.28
MRPS28-206ENST00000520946 LGALS2P05162 132 aa13.32□□□□□ -0.28
MRPS28-206ENST00000520946 ARHGAP4P98171 946 aa13.32□□□□□ -0.28
MRPS28-206ENST00000520946 SP4Q02446 784 aa13.32□□□□□ -0.28
MRPS28-206ENST00000520946 UTP14CQ5TAP6 766 aaKnown RBP13.32□□□□□ -0.28
MRPS28-206ENST00000520946 B4GALNT3Q6L9W6 998 aa13.32□□□□□ -0.28
MRPS28-206ENST00000520946 TRAF7Q6Q0C0 670 aa13.32□□□□□ -0.28
MRPS28-206ENST00000520946 STOX1Q6ZVD7 989 aa13.32□□□□□ -0.28
MRPS28-206ENST00000520946 RSPH3Q86UC2 560 aa13.32□□□□□ -0.28
MRPS28-206ENST00000520946 SP7Q8TDD2 431 aaPredicted RBP13.32□□□□□ -0.28
MRPS28-206ENST00000520946 C16orf70Q9BSU1 422 aa13.32□□□□□ -0.28
MRPS28-206ENST00000520946 C11orf84Q9BUA3 381 aaPredicted RBP13.32□□□□□ -0.28
MRPS28-206ENST00000520946 RNPEPQ9H4A4 650 aa13.32□□□□□ -0.28
MRPS28-206ENST00000520946 IGFLR1Q9H665 355 aa13.32□□□□□ -0.28
MRPS28-206ENST00000520946 SETD4Q9NVD3 440 aa13.32□□□□□ -0.28
MRPS28-206ENST00000520946 PTPRSQ13332 1948 aa13.31□□□□□ -0.28
MRPS28-206ENST00000520946 CSPG5O95196 566 aa13.31□□□□□ -0.28
MRPS28-206ENST00000520946 HOXD8P13378 290 aaPredicted RBP13.31□□□□□ -0.28
MRPS28-206ENST00000520946 MRE11P49959 708 aa13.31□□□□□ -0.28
MRPS28-206ENST00000520946 CLUL1Q15846 466 aa13.31□□□□□ -0.28
MRPS28-206ENST00000520946 ADHFE1Q8IWW8 467 aa13.31□□□□□ -0.28
MRPS28-206ENST00000520946 STAG2Q8N3U4 1231 aa13.31□□□□□ -0.28
MRPS28-206ENST00000520946 CUL5Q93034 780 aa13.31□□□□□ -0.28
MRPS28-206ENST00000520946 PPP2R3CQ969Q6 453 aa13.31□□□□□ -0.28
MRPS28-206ENST00000520946 MFSD14AQ96MC6 490 aa13.31□□□□□ -0.28
MRPS28-206ENST00000520946 RTEL1Q9NZ71 1219 aa13.31□□□□□ -0.28
MRPS28-206ENST00000520946 BRWD1Q9NSI6 2320 aa13.31□□□□□ -0.28
MRPS28-206ENST00000520946 MYH6P13533 1939 aa13.31□□□□□ -0.28
MRPS28-206ENST00000520946 STAM2O75886 525 aa13.3□□□□□ -0.28
MRPS28-206ENST00000520946 RGS20O76081 388 aa13.3□□□□□ -0.28
MRPS28-206ENST00000520946 RB1P06400 928 aa13.3□□□□□ -0.28
MRPS28-206ENST00000520946 SP2Q02086 613 aa13.3□□□□□ -0.28
MRPS28-206ENST00000520946 HDAC1Q13547 482 aaPredicted RBP13.3□□□□□ -0.28
MRPS28-206ENST00000520946 HIC1Q14526 733 aa13.3□□□□□ -0.28
MRPS28-206ENST00000520946 CYFIP1Q7L576 1253 aa13.3□□□□□ -0.28
MRPS28-206ENST00000520946 RPAINQ86UA6 219 aa13.3□□□□□ -0.28
MRPS28-206ENST00000520946 SMARCC2Q8TAQ2 1214 aa13.3□□□□□ -0.28
MRPS28-206ENST00000520946 DSCC1Q9BVC3 393 aa13.3□□□□□ -0.28
MRPS28-206ENST00000520946 LMAN2LQ9H0V9 348 aa13.3□□□□□ -0.28
MRPS28-206ENST00000520946 KCNH6Q9H252 994 aa13.3□□□□□ -0.28
MRPS28-206ENST00000520946 RWDD1Q9H446 243 aaPredicted RBP13.3□□□□□ -0.28
MRPS28-206ENST00000520946 BMPR1AP36894 532 aa13.29□□□□□ -0.28
MRPS28-206ENST00000520946 ZP2Q05996 745 aa13.29□□□□□ -0.28
MRPS28-206ENST00000520946 BTG3Q14201 252 aaPredicted RBP13.29□□□□□ -0.28
MRPS28-206ENST00000520946 SART3Q15020 963 aaKnown RBP13.29□□□□□ -0.28
MRPS28-206ENST00000520946 METTL7BQ6UX53 244 aa13.29□□□□□ -0.28
MRPS28-206ENST00000520946 IL31RAQ8NI17 732 aa13.29□□□□□ -0.28
MRPS28-206ENST00000520946 PIBF1Q8WXW3 757 aa13.29□□□□□ -0.28
MRPS28-206ENST00000520946 PIGSQ96S52 555 aa13.29□□□□□ -0.28
MRPS28-206ENST00000520946 MICAL3Q7RTP6 2002 aa13.29□□□□□ -0.28
MRPS28-206ENST00000520946 PNMA6FA0A0J9YX94 578 aa13.28□□□□□ -0.28
MRPS28-206ENST00000520946 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.28□□□□□ -0.28
MRPS28-206ENST00000520946 OPLAHO14841 1288 aa13.28□□□□□ -0.28
MRPS28-206ENST00000520946 IFIT3O14879 490 aaKnown RBP13.28□□□□□ -0.28
MRPS28-206ENST00000520946 FIBPO43427 364 aa13.28□□□□□ -0.28
MRPS28-206ENST00000520946 GHRP10912 638 aa13.28□□□□□ -0.28
MRPS28-206ENST00000520946 NDUFV1P49821 464 aa13.28□□□□□ -0.28
MRPS28-206ENST00000520946 RRP1P56182 461 aaKnown RBP13.28□□□□□ -0.28
MRPS28-206ENST00000520946 NLRX1Q86UT6 975 aa13.28□□□□□ -0.28
MRPS28-206ENST00000520946 GIMAP8Q8ND71 665 aaPredicted RBP13.28□□□□□ -0.28
MRPS28-206ENST00000520946 GPKOWQ92917 476 aaPredicted RBP eCLIP13.28□□□□□ -0.28
MRPS28-206ENST00000520946 FBXL18Q96ME1 805 aa13.28□□□□□ -0.28
MRPS28-206ENST00000520946 MAD2L2Q9UI95 211 aa13.28□□□□□ -0.28
MRPS28-206ENST00000520946 NRCAMQ92823 1304 aa13.28□□□□□ -0.28
MRPS28-206ENST00000520946 MUC6Q6W4X9 2439 aa13.28□□□□□ -0.28
MRPS28-206ENST00000520946 M0QZ92 97 aa13.27□□□□□ -0.29
MRPS28-206ENST00000520946 STXBP3O00186 592 aa13.27□□□□□ -0.29
MRPS28-206ENST00000520946 PPP1R11O60927 126 aaPredicted RBP13.27□□□□□ -0.29
MRPS28-206ENST00000520946 NHLH1Q02575 133 aa13.27□□□□□ -0.29
MRPS28-206ENST00000520946 GHRHRQ02643 423 aa13.27□□□□□ -0.29
MRPS28-206ENST00000520946 TAF2Q6P1X5 1199 aa13.27□□□□□ -0.29
MRPS28-206ENST00000520946 CATIPQ7Z7H3 387 aa13.27□□□□□ -0.29
MRPS28-206ENST00000520946 RALYLQ86SE5 291 aaKnown RBP13.27□□□□□ -0.29
MRPS28-206ENST00000520946 GLG1Q92896 1179 aa13.27□□□□□ -0.29
MRPS28-206ENST00000520946 GPR20Q99678 358 aa13.27□□□□□ -0.29
MRPS28-206ENST00000520946 CD207Q9UJ71 328 aa13.27□□□□□ -0.29
MRPS28-206ENST00000520946 POTEB3A0JP26 581 aa13.26□□□□□ -0.29
MRPS28-206ENST00000520946 PALM3A6NDB9 673 aaPredicted RBP13.26□□□□□ -0.29
MRPS28-206ENST00000520946 SPATA31C2B4DYI2 1134 aa13.26□□□□□ -0.29
MRPS28-206ENST00000520946 RBAK-RBAKDNI3L0D1 243 aa13.26□□□□□ -0.29
MRPS28-206ENST00000520946 ICAM3P32942 547 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms