RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 SMIM10L2AP0DMW4 78 aa23.17■■□□□ 1.3
HDAC2-207ENST00000520170 SMIM10L2BP0DMW5 78 aa23.17■■□□□ 1.3
HDAC2-207ENST00000520170 PTH1RQ03431 593 aa23.17■■□□□ 1.3
HDAC2-207ENST00000520170 WTAPQ15007 396 aa23.17■■□□□ 1.3
HDAC2-207ENST00000520170 EPHX3Q9H6B9 360 aa23.17■■□□□ 1.3
HDAC2-207ENST00000520170 TREHO43280 583 aa23.16■■□□□ 1.3
HDAC2-207ENST00000520170 LGALS2P05162 132 aa23.16■■□□□ 1.3
HDAC2-207ENST00000520170 GSPT1P15170 499 aaKnown RBP23.16■■□□□ 1.3
HDAC2-207ENST00000520170 PDE4AP27815 886 aa23.16■■□□□ 1.3
HDAC2-207ENST00000520170 GNPTABQ3T906 1256 aa23.16■■□□□ 1.3
HDAC2-207ENST00000520170 TTC22Q5TAA0 569 aa23.16■■□□□ 1.3
HDAC2-207ENST00000520170 RALYLQ86SE5 291 aaKnown RBP23.16■■□□□ 1.3
HDAC2-207ENST00000520170 C17orf80Q9BSJ5 609 aa23.16■■□□□ 1.3
HDAC2-207ENST00000520170 RTEL1Q9NZ71 1219 aa23.16■■□□□ 1.3
HDAC2-207ENST00000520170 MRPS9P82933 396 aaKnown RBP23.15■■□□□ 1.3
HDAC2-207ENST00000520170 PLEKHG4Q58EX7 1191 aa23.15■■□□□ 1.3
HDAC2-207ENST00000520170 FBXO22Q8NEZ5 403 aa23.15■■□□□ 1.3
HDAC2-207ENST00000520170 RUFY2Q8WXA3 655 aa23.15■■□□□ 1.3
HDAC2-207ENST00000520170 RNPEPQ9H4A4 650 aa23.15■■□□□ 1.3
HDAC2-207ENST00000520170 TAF6LQ9Y6J9 622 aa23.15■■□□□ 1.3
HDAC2-207ENST00000520170 E7EWF7 191 aa23.14■■□□□ 1.29
HDAC2-207ENST00000520170 CTSHP09668 335 aa23.14■■□□□ 1.29
HDAC2-207ENST00000520170 TROAPQ12815 778 aa23.14■■□□□ 1.29
HDAC2-207ENST00000520170 SART3Q15020 963 aaKnown RBP23.14■■□□□ 1.29
HDAC2-207ENST00000520170 CYFIP1Q7L576 1253 aa23.14■■□□□ 1.29
HDAC2-207ENST00000520170 CATIPQ7Z7H3 387 aa23.14■■□□□ 1.29
HDAC2-207ENST00000520170 NCOA7Q8NI08 942 aa23.14■■□□□ 1.29
HDAC2-207ENST00000520170 HOXC8P31273 242 aa23.13■■□□□ 1.29
HDAC2-207ENST00000520170 MKRN4PQ13434 485 aaPredicted RBP23.13■■□□□ 1.29
HDAC2-207ENST00000520170 NEDD9Q14511 834 aa23.13■■□□□ 1.29
HDAC2-207ENST00000520170 SEPT8Q92599 483 aa23.13■■□□□ 1.29
HDAC2-207ENST00000520170 USP26Q9BXU7 913 aa23.13■■□□□ 1.29
HDAC2-207ENST00000520170 OSBPL7Q9BZF2 842 aa23.13■■□□□ 1.29
HDAC2-207ENST00000520170 UBE2ZQ9H832 354 aaPredicted RBP23.13■■□□□ 1.29
HDAC2-207ENST00000520170 SETD4Q9NVD3 440 aa23.13■■□□□ 1.29
HDAC2-207ENST00000520170 NLRC5Q86WI3 1866 aa23.13■■□□□ 1.29
HDAC2-207ENST00000520170 SPATA31C2B4DYI2 1134 aa23.12■■□□□ 1.29
HDAC2-207ENST00000520170 STAM2O75886 525 aa23.12■■□□□ 1.29
HDAC2-207ENST00000520170 UPP2O95045 317 aa23.12■■□□□ 1.29
HDAC2-207ENST00000520170 CHMLP26374 656 aa23.12■■□□□ 1.29
HDAC2-207ENST00000520170 ICAM3P32942 547 aa23.12■■□□□ 1.29
HDAC2-207ENST00000520170 HTRA4P83105 476 aaPredicted RBP23.12■■□□□ 1.29
HDAC2-207ENST00000520170 SEMA3FQ13275 785 aa23.12■■□□□ 1.29
HDAC2-207ENST00000520170 UTP14CQ5TAP6 766 aaKnown RBP23.12■■□□□ 1.29
HDAC2-207ENST00000520170 METTL7BQ6UX53 244 aa23.12■■□□□ 1.29
HDAC2-207ENST00000520170 INPP4AQ96PE3 977 aaPredicted RBP23.12■■□□□ 1.29
HDAC2-207ENST00000520170 GPR20Q99678 358 aa23.12■■□□□ 1.29
HDAC2-207ENST00000520170 FRMPD4Q14CM0 1322 aa23.11■■□□□ 1.29
HDAC2-207ENST00000520170 FIBPO43427 364 aa23.11■■□□□ 1.29
HDAC2-207ENST00000520170 GNAT1P11488 350 aa23.11■■□□□ 1.29
HDAC2-207ENST00000520170 SP4Q02446 784 aa23.11■■□□□ 1.29
HDAC2-207ENST00000520170 TRIM50Q86XT4 487 aa23.11■■□□□ 1.29
HDAC2-207ENST00000520170 YME1L1Q96TA2 773 aa23.11■■□□□ 1.29
HDAC2-207ENST00000520170 LRFN3Q9BTN0 628 aa23.11■■□□□ 1.29
HDAC2-207ENST00000520170 TELO2Q9Y4R8 837 aa23.11■■□□□ 1.29
HDAC2-207ENST00000520170 MYO7AQ13402 2215 aa23.1■■□□□ 1.29
HDAC2-207ENST00000520170 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.1■■□□□ 1.29
HDAC2-207ENST00000520170 KCNA5P22460 613 aa23.1■■□□□ 1.29
HDAC2-207ENST00000520170 PLA2G5P39877 138 aa23.1■■□□□ 1.29
HDAC2-207ENST00000520170 USP17L6PQ6QN14 398 aa23.1■■□□□ 1.29
HDAC2-207ENST00000520170 SMARCC2Q8TAQ2 1214 aa23.1■■□□□ 1.29
HDAC2-207ENST00000520170 SP7Q8TDD2 431 aaPredicted RBP23.1■■□□□ 1.29
HDAC2-207ENST00000520170 IGDCC4Q8TDY8 1250 aa23.1■■□□□ 1.29
HDAC2-207ENST00000520170 KHSRPQ92945 711 aaKnown RBP eCLIP23.1■■□□□ 1.29
HDAC2-207ENST00000520170 CUL5Q93034 780 aa23.1■■□□□ 1.29
HDAC2-207ENST00000520170 FAM122AQ96E09 287 aa23.1■■□□□ 1.29
HDAC2-207ENST00000520170 CAND2O75155 1236 aa23.09■■□□□ 1.29
HDAC2-207ENST00000520170 ANTXR2P58335 489 aa23.09■■□□□ 1.29
HDAC2-207ENST00000520170 EPC2Q52LR7 807 aa23.09■■□□□ 1.29
HDAC2-207ENST00000520170 TOP1MTQ969P6 601 aa23.09■■□□□ 1.29
HDAC2-207ENST00000520170 RRP36Q96EU6 259 aaKnown RBP23.09■■□□□ 1.29
HDAC2-207ENST00000520170 MYL10Q9BUA6 226 aa23.09■■□□□ 1.29
HDAC2-207ENST00000520170 CD320Q9NPF0 282 aa23.09■■□□□ 1.29
HDAC2-207ENST00000520170 ZNF215Q9UL58 517 aaPredicted RBP23.09■■□□□ 1.29
HDAC2-207ENST00000520170 ARHGAP4P98171 946 aa23.08■■□□□ 1.29
HDAC2-207ENST00000520170 TMEM31Q5JXX7 168 aa23.08■■□□□ 1.29
HDAC2-207ENST00000520170 MRPL38Q96DV4 380 aaKnown RBP23.08■■□□□ 1.29
HDAC2-207ENST00000520170 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.07■■□□□ 1.28
HDAC2-207ENST00000520170 PTPROQ16827 1216 aa23.07■■□□□ 1.28
HDAC2-207ENST00000520170 LEXMQ3ZCV2 418 aa23.07■■□□□ 1.28
HDAC2-207ENST00000520170 PCNX4Q63HM2 1172 aa23.07■■□□□ 1.28
HDAC2-207ENST00000520170 MB21D2Q8IYB1 491 aaPredicted RBP23.07■■□□□ 1.28
HDAC2-207ENST00000520170 ZNF654Q8IZM8 581 aa23.07■■□□□ 1.28
HDAC2-207ENST00000520170 CTCFLQ8NI51 663 aaPredicted RBP23.07■■□□□ 1.28
HDAC2-207ENST00000520170 LMBR1Q8WVP7 490 aa23.07■■□□□ 1.28
HDAC2-207ENST00000520170 SAMD11Q96NU1 681 aa23.07■■□□□ 1.28
HDAC2-207ENST00000520170 IFIH1Q9BYX4 1025 aaKnown RBP23.07■■□□□ 1.28
HDAC2-207ENST00000520170 MEIS2O14770 477 aa23.06■■□□□ 1.28
HDAC2-207ENST00000520170 SGSM2O43147 1006 aa23.06■■□□□ 1.28
HDAC2-207ENST00000520170 GPM6BQ13491 265 aa23.06■■□□□ 1.28
HDAC2-207ENST00000520170 NLRX1Q86UT6 975 aa23.06■■□□□ 1.28
HDAC2-207ENST00000520170 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.06■■□□□ 1.28
HDAC2-207ENST00000520170 SENP7Q9BQF6 1050 aa23.06■■□□□ 1.28
HDAC2-207ENST00000520170 SPZ1Q9BXG8 430 aa23.06■■□□□ 1.28
HDAC2-207ENST00000520170 SEC63Q9UGP8 760 aaKnown RBP23.06■■□□□ 1.28
HDAC2-207ENST00000520170 SUPT16HQ9Y5B9 1047 aaKnown RBP23.06■■□□□ 1.28
HDAC2-207ENST00000520170 RALGAPA2Q2PPJ7 1873 aa23.06■■□□□ 1.28
HDAC2-207ENST00000520170 FAM86C2PA6NEL3 165 aa23.05■■□□□ 1.28
HDAC2-207ENST00000520170 KIF5BP33176 963 aa23.05■■□□□ 1.28
HDAC2-207ENST00000520170 ADAM17P78536 824 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms