RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 ARHGAP1Q07960 439 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 RESTQ13127 1097 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 ORC2Q13416 577 aaPredicted RBP8.63□□□□□ -1.03
SDCBP-206ENST00000519115 PKP1Q13835 747 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 TRIM60Q495X7 471 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 RILPL1Q5EBL4 403 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 JAKMIP3Q5VZ66 844 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 PCNX4Q63HM2 1172 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 KRT40Q6A162 431 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 SLC39A5Q6ZMH5 540 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 REXO1Q8N1G1 1221 aaKnown RBP8.63□□□□□ -1.03
SDCBP-206ENST00000519115 PCSK9Q8NBP7 692 aaKnown RBP8.63□□□□□ -1.03
SDCBP-206ENST00000519115 DAGLBQ8NCG7 672 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 CCDC148Q8NFR7 591 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 BICD2Q8TD16 824 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 AFG1LQ8WV93 481 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 PHF20Q9BVI0 1012 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 ANO3Q9BYT9 981 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 STARD7Q9NQZ5 370 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 POLR3EQ9NVU0 708 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 NR2E3Q9Y5X4 410 aa8.63□□□□□ -1.03
SDCBP-206ENST00000519115 VPS37CA5D8V6 355 aaPredicted RBP8.62□□□□□ -1.03
SDCBP-206ENST00000519115 MOXD2PA6NHM9 499 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 PQBP1O60828 265 aaKnown RBP8.62□□□□□ -1.03
SDCBP-206ENST00000519115 YEATS4O95619 227 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 GGPS1O95749 300 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 UBA1P22314 1058 aaKnown RBP8.62□□□□□ -1.03
SDCBP-206ENST00000519115 FOSBP53539 338 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 PSMC6P62333 389 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 NKX3-2P78367 333 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 SP2Q02086 613 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 SEMA3FQ13275 785 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 KLHL40Q2TBA0 621 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 GNPTABQ3T906 1256 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 PRPF38BQ5VTL8 546 aaKnown RBP8.62□□□□□ -1.03
SDCBP-206ENST00000519115 NOSTRINQ8IVI9 506 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 PPP1R13LQ8WUF5 828 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 GLT1D1Q96MS3 346 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 INPP4AQ96PE3 977 aaPredicted RBP8.62□□□□□ -1.03
SDCBP-206ENST00000519115 ZMYND12Q9H0C1 365 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 BCAS3Q9H6U6 928 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 EHMT1Q9H9B1 1298 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 C6orf50Q9HD87 102 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 LMBRD1Q9NUN5 540 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 PKD2L1Q9P0L9 805 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 DDX41Q9UJV9 622 aaKnown RBP8.62□□□□□ -1.03
SDCBP-206ENST00000519115 Q9Y3F1 56 aa8.62□□□□□ -1.03
SDCBP-206ENST00000519115 MYH9P35579 1960 aaKnown RBP8.62□□□□□ -1.03
SDCBP-206ENST00000519115 A0A0U1RQG5 324 aaPredicted RBP8.61□□□□□ -1.03
SDCBP-206ENST00000519115 FIBPO43427 364 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 ZEB2O60315 1214 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 STAM2O75886 525 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 FOSP01100 380 aaPredicted RBP8.61□□□□□ -1.03
SDCBP-206ENST00000519115 MMP3P08254 477 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 ZNF286BP0CG31 522 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 CD44P16070 742 aaKnown RBP8.61□□□□□ -1.03
SDCBP-206ENST00000519115 ITGB5P18084 799 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 SREBF1P36956 1147 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 NASPP49321 788 aaPredicted RBP8.61□□□□□ -1.03
SDCBP-206ENST00000519115 CLK2P49760 499 aaKnown RBP8.61□□□□□ -1.03
SDCBP-206ENST00000519115 CPT1AP50416 773 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 NLRP5P59047 1200 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 CHMP4BP1P59074 171 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 UBE2HP62256 183 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 ARHGAP4P98171 946 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 PURAQ00577 322 aaKnown RBP8.61□□□□□ -1.03
SDCBP-206ENST00000519115 SP4Q02446 784 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 TLE2Q04725 743 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 AP3B2Q13367 1082 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 SNX17Q15036 470 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 BRDTQ58F21 947 aaPredicted RBP8.61□□□□□ -1.03
SDCBP-206ENST00000519115 DHX37Q8IY37 1157 aaKnown RBP8.61□□□□□ -1.03
SDCBP-206ENST00000519115 KCNG4Q8TDN1 519 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 PRDM5Q9NQX1 630 aaPredicted RBP8.61□□□□□ -1.03
SDCBP-206ENST00000519115 GJB4Q9NTQ9 266 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 KCNJ14Q9UNX9 436 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 CEP131Q9UPN4 1083 aa8.61□□□□□ -1.03
SDCBP-206ENST00000519115 GRIN2DO15399 1336 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 A6NJR5 290 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 SPATA31C2B4DYI2 1134 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 PPP6R2O75170 966 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 LETM1O95202 739 aaPredicted RBP8.6□□□□□ -1.03
SDCBP-206ENST00000519115 ICAM3P32942 547 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 ITGA7Q13683 1181 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 CELF3Q5SZQ8 465 aaKnown RBP8.6□□□□□ -1.03
SDCBP-206ENST00000519115 MYSM1Q5VVJ2 828 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 XRRA1Q6P2D8 792 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 KCNV1Q6PIU1 500 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 CYFIP1Q7L576 1253 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 SH3RF1Q7Z6J0 888 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 NLRX1Q86UT6 975 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 CYP2W1Q8TAV3 490 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 SPATA33Q96N06 139 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 UIMC1Q96RL1 719 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 MTG1Q9BT17 334 aaPredicted RBP8.6□□□□□ -1.03
SDCBP-206ENST00000519115 MLXIPQ9HAP2 919 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 PDLIM7Q9NR12 457 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 PCDHA4Q9UN74 947 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 TELO2Q9Y4R8 837 aa8.6□□□□□ -1.03
SDCBP-206ENST00000519115 UBIAD1Q9Y5Z9 338 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms