RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 COASYQ13057 564 aa10.39□□□□□ -0.75
PVT1-207ENST00000518528 CBX2Q14781 532 aaPredicted RBP10.39□□□□□ -0.75
PVT1-207ENST00000518528 CDC37Q16543 378 aaPredicted RBP10.39□□□□□ -0.75
PVT1-207ENST00000518528 MYSM1Q5VVJ2 828 aa10.39□□□□□ -0.75
PVT1-207ENST00000518528 TSHZ3Q63HK5 1081 aa10.39□□□□□ -0.75
PVT1-207ENST00000518528 ZBTB33Q86T24 672 aa10.39□□□□□ -0.75
PVT1-207ENST00000518528 SMRP1Q8NCR6 262 aa10.39□□□□□ -0.75
PVT1-207ENST00000518528 MSLNLQ96KJ4 702 aa10.39□□□□□ -0.75
PVT1-207ENST00000518528 TUT1Q9H6E5 874 aaKnown RBP10.39□□□□□ -0.75
PVT1-207ENST00000518528 MYO7AQ13402 2215 aa10.39□□□□□ -0.75
PVT1-207ENST00000518528 TTC41PQ6P2S7 1318 aa10.38□□□□□ -0.75
PVT1-207ENST00000518528 CCDC171Q6TFL3 1326 aa10.38□□□□□ -0.75
PVT1-207ENST00000518528 PROB1E7EW31 1015 aa10.38□□□□□ -0.75
PVT1-207ENST00000518528 LINC01565O15544 149 aa10.38□□□□□ -0.75
PVT1-207ENST00000518528 TREHO43280 583 aa10.38□□□□□ -0.75
PVT1-207ENST00000518528 DHX16O60231 1041 aaKnown RBP10.38□□□□□ -0.75
PVT1-207ENST00000518528 FGRP09769 529 aa10.38□□□□□ -0.75
PVT1-207ENST00000518528 SRGAP2BP0DMP2 458 aa10.38□□□□□ -0.75
PVT1-207ENST00000518528 SNHG28P0DPA3 235 aa10.38□□□□□ -0.75
PVT1-207ENST00000518528 PCP11498 1178 aaKnown RBP10.38□□□□□ -0.75
PVT1-207ENST00000518528 MYCLP12524 364 aaPredicted RBP10.38□□□□□ -0.75
PVT1-207ENST00000518528 ICAM3P32942 547 aa10.38□□□□□ -0.75
PVT1-207ENST00000518528 GTF2F1P35269 517 aaKnown RBP eCLIP10.38□□□□□ -0.75
PVT1-207ENST00000518528 RRP1P56182 461 aaKnown RBP10.38□□□□□ -0.75
PVT1-207ENST00000518528 ALX1Q15699 326 aa10.38□□□□□ -0.75
PVT1-207ENST00000518528 CCDC178Q5BJE1 867 aa10.38□□□□□ -0.75
PVT1-207ENST00000518528 RSPH3Q86UC2 560 aa10.38□□□□□ -0.75
PVT1-207ENST00000518528 P2RX5Q93086 422 aa10.38□□□□□ -0.75
PVT1-207ENST00000518528 RPGRIP1Q96KN7 1286 aa10.38□□□□□ -0.75
PVT1-207ENST00000518528 USP26Q9BXU7 913 aa10.38□□□□□ -0.75
PVT1-207ENST00000518528 PXMP2Q9NR77 195 aa10.38□□□□□ -0.75
PVT1-207ENST00000518528 ZNF215Q9UL58 517 aaPredicted RBP10.38□□□□□ -0.75
PVT1-207ENST00000518528 PLAGL2Q9UPG8 496 aa10.38□□□□□ -0.75
PVT1-207ENST00000518528 USP15Q9Y4E8 981 aaPredicted RBP10.38□□□□□ -0.75
PVT1-207ENST00000518528 SIP14410 1827 aa10.37□□□□□ -0.75
PVT1-207ENST00000518528 SPTBN4Q9H254 2564 aa10.37□□□□□ -0.75
PVT1-207ENST00000518528 H0Y858 1186 aa10.37□□□□□ -0.75
PVT1-207ENST00000518528 GALR2O43603 387 aaPredicted RBP10.37□□□□□ -0.75
PVT1-207ENST00000518528 CFBP00751 764 aa10.37□□□□□ -0.75
PVT1-207ENST00000518528 ATF7P17544 494 aaPredicted RBP10.37□□□□□ -0.75
PVT1-207ENST00000518528 VCPP55072 806 aaKnown RBP10.37□□□□□ -0.75
PVT1-207ENST00000518528 HIC1Q14526 733 aa10.37□□□□□ -0.75
PVT1-207ENST00000518528 HSDL1Q3SXM5 330 aa10.37□□□□□ -0.75
PVT1-207ENST00000518528 FAM26DQ5JW98 314 aa10.37□□□□□ -0.75
PVT1-207ENST00000518528 MIER1Q8N108 512 aa10.37□□□□□ -0.75
PVT1-207ENST00000518528 TBC1D5Q92609 795 aa10.37□□□□□ -0.75
PVT1-207ENST00000518528 C16orf70Q9BSU1 422 aa10.37□□□□□ -0.75
PVT1-207ENST00000518528 UBA5Q9GZZ9 404 aa10.37□□□□□ -0.75
PVT1-207ENST00000518528 RNPEPQ9H4A4 650 aa10.37□□□□□ -0.75
PVT1-207ENST00000518528 RNF41Q9H4P4 317 aaPredicted RBP10.37□□□□□ -0.75
PVT1-207ENST00000518528 ALG13Q9NP73 1137 aaKnown RBP10.37□□□□□ -0.75
PVT1-207ENST00000518528 TLR9Q9NR96 1032 aa10.37□□□□□ -0.75
PVT1-207ENST00000518528 MAP3K20Q9NYL2 800 aaKnown RBP10.37□□□□□ -0.75
PVT1-207ENST00000518528 COL20A1Q9P218 1284 aa10.37□□□□□ -0.75
PVT1-207ENST00000518528 TRPC6Q9Y210 931 aa10.37□□□□□ -0.75
PVT1-207ENST00000518528 COL4A6Q14031 1691 aa10.37□□□□□ -0.75
PVT1-207ENST00000518528 TRIP12Q14669 1992 aaPredicted RBP10.36□□□□□ -0.75
PVT1-207ENST00000518528 FAM186AA6NE01 2351 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 SORBS3O60504 671 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 LGALS2P05162 132 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 GOLGA8HP0CJ92 632 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 CCND2P30279 289 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 HOXC8P31273 242 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 ID4P47928 161 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 NRIP1P48552 1158 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 NT5C2P49902 561 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 HNRNPUQ00839 825 aaKnown RBP eCLIP10.36□□□□□ -0.751e-6■■■■□ 21.2
PVT1-207ENST00000518528 TRAF1Q13077 416 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 PTPN21Q16825 1174 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 GNPTABQ3T906 1256 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 ASPRV1Q53RT3 343 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 MCTP2Q6DN12 878 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 TAF2Q6P1X5 1199 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 MFSD6Q6ZSS7 791 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 CMTR2Q8IYT2 770 aaKnown RBP10.36□□□□□ -0.75
PVT1-207ENST00000518528 ADGRF4Q8IZF3 695 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 SAMD3Q8N6K7 520 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 MICAL1Q8TDZ2 1067 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 ESR2Q92731 530 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 ASIC4Q96FT7 647 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 CDCA3Q99618 268 aaPredicted RBP10.36□□□□□ -0.75
PVT1-207ENST00000518528 PDCD2LQ9BRP1 358 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 TLE6Q9H808 572 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 SETD4Q9NVD3 440 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 CLEC1BQ9P126 229 aa10.36□□□□□ -0.75
PVT1-207ENST00000518528 PRR23AA6NEV1 266 aa10.35□□□□□ -0.75
PVT1-207ENST00000518528 ENPP3O14638 875 aa10.35□□□□□ -0.75
PVT1-207ENST00000518528 RPLP2P05387 115 aaKnown RBP10.35□□□□□ -0.75
PVT1-207ENST00000518528 STAG3L1P0CL83 205 aa10.35□□□□□ -0.75
PVT1-207ENST00000518528 GHRP10912 638 aa10.35□□□□□ -0.75
PVT1-207ENST00000518528 UBA1P22314 1058 aaKnown RBP10.35□□□□□ -0.75
PVT1-207ENST00000518528 ARHGAP4P98171 946 aa10.35□□□□□ -0.75
PVT1-207ENST00000518528 NEDD9Q14511 834 aa10.35□□□□□ -0.75
PVT1-207ENST00000518528 QRICH1Q2TAL8 776 aa10.35□□□□□ -0.75
PVT1-207ENST00000518528 RBM23Q86U06 439 aaKnown RBP10.35□□□□□ -0.75
PVT1-207ENST00000518528 VSIG10LQ86VR7 867 aa10.35□□□□□ -0.75
PVT1-207ENST00000518528 IQCA1Q86XH1 822 aa10.35□□□□□ -0.75
PVT1-207ENST00000518528 DGKHQ86XP1 1220 aa10.35□□□□□ -0.75
PVT1-207ENST00000518528 UBALD2Q8IYN6 164 aa10.35□□□□□ -0.75
PVT1-207ENST00000518528 SPPL3Q8TCT6 385 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms