RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 KRT32Q14532 448 aa12.19□□□□□ -0.46
PDGFRB-203ENST00000517660 DGKDQ16760 1214 aa12.19□□□□□ -0.46
PDGFRB-203ENST00000517660 DHX32Q7L7V1 743 aaKnown RBP12.19□□□□□ -0.46
PDGFRB-203ENST00000517660 RPUSD2Q8IZ73 545 aaKnown RBP12.19□□□□□ -0.46
PDGFRB-203ENST00000517660 GDPD5Q8WTR4 605 aa12.19□□□□□ -0.46
PDGFRB-203ENST00000517660 CUL5Q93034 780 aa12.19□□□□□ -0.46
PDGFRB-203ENST00000517660 LRRC2Q9BYS8 371 aa12.19□□□□□ -0.46
PDGFRB-203ENST00000517660 LCTP09848 1927 aa12.18□□□□□ -0.46
PDGFRB-203ENST00000517660 LCHNA4D1U4 455 aa12.18□□□□□ -0.46
PDGFRB-203ENST00000517660 RBAK-RBAKDNI3L0D1 243 aa12.18□□□□□ -0.46
PDGFRB-203ENST00000517660 PPFIA4O75335 1185 aa12.18□□□□□ -0.46
PDGFRB-203ENST00000517660 STAM2O75886 525 aa12.18□□□□□ -0.46
PDGFRB-203ENST00000517660 RXRAP19793 462 aa12.18□□□□□ -0.46
PDGFRB-203ENST00000517660 CHMP4BP1P59074 171 aa12.18□□□□□ -0.46
PDGFRB-203ENST00000517660 TCF15Q12870 199 aa12.18□□□□□ -0.46
PDGFRB-203ENST00000517660 CELF3Q5SZQ8 465 aaKnown RBP12.18□□□□□ -0.46
PDGFRB-203ENST00000517660 MYSM1Q5VVJ2 828 aa12.18□□□□□ -0.46
PDGFRB-203ENST00000517660 TMTC3Q6ZXV5 915 aa12.18□□□□□ -0.46
PDGFRB-203ENST00000517660 RASEFQ8IZ41 740 aa12.18□□□□□ -0.46
PDGFRB-203ENST00000517660 RETREG2Q8NC44 543 aa12.18□□□□□ -0.46
PDGFRB-203ENST00000517660 IL31RAQ8NI17 732 aa12.18□□□□□ -0.46
PDGFRB-203ENST00000517660 PPTC7Q8NI37 304 aa12.18□□□□□ -0.46
PDGFRB-203ENST00000517660 SMARCC2Q8TAQ2 1214 aa12.18□□□□□ -0.46
PDGFRB-203ENST00000517660 KAT2BQ92831 832 aa12.18□□□□□ -0.46
PDGFRB-203ENST00000517660 BRWD1Q9NSI6 2320 aa12.18□□□□□ -0.46
PDGFRB-203ENST00000517660 GRXCR2A6NFK2 248 aa12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 PIK3CDO00329 1044 aa12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 MEIS2O14770 477 aa12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 GGPS1O95749 300 aa12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 HMGB1P09429 215 aaKnown RBP12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 KCNA5P22460 613 aa12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 BFSP2Q13515 415 aa12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 GNPTABQ3T906 1256 aa12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 XRRA1Q6P2D8 792 aa12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 USP17L6PQ6QN14 398 aa12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 SESTD1Q86VW0 696 aa12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 RAB11FIP4Q86YS3 637 aa12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 CMTR1Q8N1G2 835 aaKnown RBP12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 PPP1R13LQ8WUF5 828 aa12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 ZFP91Q96JP5 570 aaPredicted RBP12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 SPATA33Q96N06 139 aa12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 KATNAL1Q9BW62 490 aa12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 PSTPIP2Q9H939 334 aa12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 MLXIPQ9HAP2 919 aa12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 NOD1Q9Y239 953 aa12.17□□□□□ -0.46
PDGFRB-203ENST00000517660 FRMPD4Q14CM0 1322 aa12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 C19orf67A6NJJ6 358 aa12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 PITPNM1O00562 1244 aa12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 PFKMP08237 780 aa12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 HOXD8P13378 290 aaPredicted RBP12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 UBA1P22314 1058 aaKnown RBP12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 ICAM3P32942 547 aa12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 RFC2P35250 354 aa12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 PSEN2P49810 448 aa12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 MRPS9P82933 396 aaKnown RBP12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 SP2Q02086 613 aa12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 PTGISQ16647 500 aa12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 ADCK5Q3MIX3 580 aa12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 PTCRAQ6ISU1 281 aaPredicted RBP12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 APOA5Q6Q788 366 aa12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 MICU3Q86XE3 530 aa12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 HERC6Q8IVU3 1022 aa12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 CCDC82Q8N4S0 544 aa12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 C7orf31Q8N865 590 aa12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 KCNB2Q92953 911 aa12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 INPP4AQ96PE3 977 aaPredicted RBP12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 RBM28Q9NW13 759 aaKnown RBP12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 RTEL1Q9NZ71 1219 aa12.16□□□□□ -0.46
PDGFRB-203ENST00000517660 BAZ2BQ9UIF8 2168 aaKnown RBP12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 SPATA31C2B4DYI2 1134 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 HAS3O00219 553 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 ZBTB43O43298 467 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 SORBS3O60504 671 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 F2P00734 622 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 NEFLP07196 543 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 ZP2Q05996 745 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 NEDD9Q14511 834 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 MFSD10Q14728 455 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 HSDL1Q3SXM5 330 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 PCNX4Q63HM2 1172 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 GDF6Q6KF10 455 aaPredicted RBP12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 CCDC155Q8N6L0 562 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 NEK9Q8TD19 979 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 GPKOWQ92917 476 aaPredicted RBP eCLIP12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 TCEANC2Q96MN5 208 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 ALG1Q9BT22 464 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 LMCD1Q9NZU5 365 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 HDAC6Q9UBN7 1215 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 GTF2IRD1Q9UHL9 959 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 BRPF3Q9ULD4 1205 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 PTPRSQ13332 1948 aa12.15□□□□□ -0.46
PDGFRB-203ENST00000517660 hCG_1642624A0A1W2PR95 340 aa12.14□□□□□ -0.47
PDGFRB-203ENST00000517660 FIBPO43427 364 aa12.14□□□□□ -0.47
PDGFRB-203ENST00000517660 GFRA3O60609 400 aa12.14□□□□□ -0.47
PDGFRB-203ENST00000517660 IQCF3P0C7M6 154 aa12.14□□□□□ -0.47
PDGFRB-203ENST00000517660 HSPA4P34932 840 aa12.14□□□□□ -0.47
PDGFRB-203ENST00000517660 RCAN1P53805 252 aa12.14□□□□□ -0.47
PDGFRB-203ENST00000517660 RTN1Q16799 776 aa12.14□□□□□ -0.47
PDGFRB-203ENST00000517660 KIAA0753Q2KHM9 967 aa12.14□□□□□ -0.47
PDGFRB-203ENST00000517660 METTL7BQ6UX53 244 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms