RNA–Protein interactions for RNA: ENST00000516883.1

SNORD60.2-201, Transcript of small nucleolar RNA, C/D box 60, humanhuman

BASIC

Gene SNORD60, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD60.2-201ENST00000516883 SMARCA5O60264 1052 aaPredicted RBP4.88□□□□□ -1.63
SNORD60.2-201ENST00000516883 RPL13P26373 211 aaKnown RBP4.88□□□□□ -1.63
SNORD60.2-201ENST00000516883 BUD31P41223 144 aaPredicted RBP4.88□□□□□ -1.63
SNORD60.2-201ENST00000516883 NKX3-2P78367 333 aa4.88□□□□□ -1.63
SNORD60.2-201ENST00000516883 FRMD5Q7Z6J6 570 aa4.88□□□□□ -1.63
SNORD60.2-201ENST00000516883 FERMT3Q86UX7 667 aa4.88□□□□□ -1.63
SNORD60.2-201ENST00000516883 ZC3H18Q86VM9 953 aaKnown RBP4.88□□□□□ -1.63
SNORD60.2-201ENST00000516883 SCUBE1Q8IWY4 988 aa4.88□□□□□ -1.63
SNORD60.2-201ENST00000516883 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.88□□□□□ -1.63
SNORD60.2-201ENST00000516883 PMFBP1Q8TBY8 1022 aa4.88□□□□□ -1.63
SNORD60.2-201ENST00000516883 ADAMTS17Q8TE56 1095 aa4.88□□□□□ -1.63
SNORD60.2-201ENST00000516883 SH3RF2Q8TEC5 729 aa4.88□□□□□ -1.63
SNORD60.2-201ENST00000516883 YIPF4Q9BSR8 244 aa4.88□□□□□ -1.63
SNORD60.2-201ENST00000516883 PCDHA8Q9Y5H6 950 aa4.88□□□□□ -1.63
SNORD60.2-201ENST00000516883 NCANO14594 1321 aa4.88□□□□□ -1.63
SNORD60.2-201ENST00000516883 KRIT1O00522 736 aa4.87□□□□□ -1.63
SNORD60.2-201ENST00000516883 DDX3XO00571 662 aaKnown RBP eCLIP4.87□□□□□ -1.63
SNORD60.2-201ENST00000516883 PRRG2O14669 202 aa4.87□□□□□ -1.63
SNORD60.2-201ENST00000516883 TUSC3Q13454 348 aa4.87□□□□□ -1.63
SNORD60.2-201ENST00000516883 SKOR2Q2VWA4 1001 aaPredicted RBP4.87□□□□□ -1.63
SNORD60.2-201ENST00000516883 PHF19Q5T6S3 580 aa4.87□□□□□ -1.63
SNORD60.2-201ENST00000516883 MCTP2Q6DN12 878 aa4.87□□□□□ -1.63
SNORD60.2-201ENST00000516883 TMC5Q6UXY8 1006 aa4.87□□□□□ -1.63
SNORD60.2-201ENST00000516883 TTLL7Q6ZT98 887 aa4.87□□□□□ -1.63
SNORD60.2-201ENST00000516883 UHMK1Q8TAS1 419 aaKnown RBP4.87□□□□□ -1.63
SNORD60.2-201ENST00000516883 PHOSPHO1Q8TCT1 267 aa4.87□□□□□ -1.63
SNORD60.2-201ENST00000516883 DDX1Q92499 740 aaKnown RBP4.87□□□□□ -1.63
SNORD60.2-201ENST00000516883 KISS1RQ969F8 398 aaPredicted RBP4.87□□□□□ -1.63
SNORD60.2-201ENST00000516883 DNAJC2Q99543 621 aaKnown RBP4.87□□□□□ -1.63
SNORD60.2-201ENST00000516883 DNAJC7Q99615 494 aa4.87□□□□□ -1.63
SNORD60.2-201ENST00000516883 CDC6Q99741 560 aa4.87□□□□□ -1.63
SNORD60.2-201ENST00000516883 GNAT1P11488 350 aa4.86□□□□□ -1.63
SNORD60.2-201ENST00000516883 MLLT6P55198 1093 aaPredicted RBP4.86□□□□□ -1.63
SNORD60.2-201ENST00000516883 RGL3Q3MIN7 710 aa4.86□□□□□ -1.63
SNORD60.2-201ENST00000516883 CYP4F22Q6NT55 531 aa4.86□□□□□ -1.63
SNORD60.2-201ENST00000516883 TTLL6Q8N841 843 aa4.86□□□□□ -1.63
SNORD60.2-201ENST00000516883 CXorf38Q8TB03 319 aa4.86□□□□□ -1.63
SNORD60.2-201ENST00000516883 PTPRN2Q92932 1015 aa4.86□□□□□ -1.63
SNORD60.2-201ENST00000516883 TEPSINQ96N21 525 aa4.86□□□□□ -1.63
SNORD60.2-201ENST00000516883 SRPK1Q96SB4 655 aaKnown RBP4.86□□□□□ -1.63
SNORD60.2-201ENST00000516883 DHRS4Q9BTZ2 278 aa4.86□□□□□ -1.63
SNORD60.2-201ENST00000516883 CD244Q9BZW8 370 aa4.86□□□□□ -1.63
SNORD60.2-201ENST00000516883 LNPKQ9C0E8 428 aa4.86□□□□□ -1.63
SNORD60.2-201ENST00000516883 HSPBP1Q9NZL4 362 aa4.86□□□□□ -1.63
SNORD60.2-201ENST00000516883 MRPS23Q9Y3D9 190 aaKnown RBP4.86□□□□□ -1.63
SNORD60.2-201ENST00000516883 FAM47E-STBD1D6RA91 191 aa4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 ACOT7O00154 380 aa4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 MAFKO60675 156 aa4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 PYGMP11217 842 aa4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 ZNF28P17035 718 aa4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 SUMO1P63165 101 aaKnown RBP4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 PAN2Q504Q3 1202 aaKnown RBP4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 ZFYVE27Q5T4F4 411 aa4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 MAMDC2Q7Z304 686 aaPredicted RBP4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 LRP10Q7Z4F1 713 aa4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 MTDHQ86UE4 582 aaKnown RBP4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 JMYQ8N9B5 988 aa4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 TXNDC5Q8NBS9 432 aaKnown RBP4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 TTLL11Q8NHH1 800 aa4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 PCDH19Q8TAB3 1148 aa4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 ZCCHC14Q8WYQ9 949 aaKnown RBP4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 PDGFDQ9GZP0 370 aaPredicted RBP4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 PCDH18Q9HCL0 1135 aa4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 NGRNQ9NPE2 291 aaKnown RBP4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 USP40Q9NVE5 1235 aa4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 DSEQ9UL01 958 aa4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 CBLCQ9ULV8 474 aa4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 PCDHA9Q9Y5H5 950 aa4.85□□□□□ -1.63
SNORD60.2-201ENST00000516883 ARVCFO00192 962 aa4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 AQP7O14520 342 aa4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 CRTAMO95727 393 aa4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 AMY2AP04746 511 aa4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 COL6A1P12109 1028 aa4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 FAHP16930 419 aa4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 AMY2BP19961 511 aa4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 CNR2P34972 360 aa4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 EPHA5P54756 1037 aa4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 GJA9P57773 515 aa4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 SPIRE1Q08AE8 756 aa4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 TRIM48Q8IWZ4 208 aa4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 LILRB2Q8N423 598 aa4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 SLC7A14Q8TBB6 771 aa4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 MKL1Q969V6 931 aa4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 ALG1Q9BT22 464 aa4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 SLC52A2Q9HAB3 445 aa4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 CROTQ9UKG9 612 aa4.84□□□□□ -1.63
SNORD60.2-201ENST00000516883 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.83□□□□□ -1.64
SNORD60.2-201ENST00000516883 WNT9AO14904 365 aa4.83□□□□□ -1.64
SNORD60.2-201ENST00000516883 CKMP06732 381 aa4.83□□□□□ -1.64
SNORD60.2-201ENST00000516883 SRGAP2CP0DJJ0 459 aa4.83□□□□□ -1.64
SNORD60.2-201ENST00000516883 SYN1P17600 705 aa4.83□□□□□ -1.64
SNORD60.2-201ENST00000516883 IL13P35225 146 aa4.83□□□□□ -1.64
SNORD60.2-201ENST00000516883 KRTAP10-2P60368 255 aa4.83□□□□□ -1.64
SNORD60.2-201ENST00000516883 GABREP78334 506 aa4.83□□□□□ -1.64
SNORD60.2-201ENST00000516883 GUCY1A3Q02108 690 aa4.83□□□□□ -1.64
SNORD60.2-201ENST00000516883 PAK1Q13153 545 aa4.83□□□□□ -1.64
SNORD60.2-201ENST00000516883 SF3A1Q15459 793 aaKnown RBP4.83□□□□□ -1.64
SNORD60.2-201ENST00000516883 LONRF2Q1L5Z9 754 aa4.83□□□□□ -1.64
SNORD60.2-201ENST00000516883 PRAMEF18Q5VWM3 479 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms