RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 UBE2SQ16763 222 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 CCDC144BQ3MJ40 725 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 DUSP28Q4G0W2 176 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 CEP55Q53EZ4 464 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 KRT40Q6A162 431 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 PPP4R3AQ6IN85 833 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 CCDC62Q6P9F0 684 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 TRPV1Q8NER1 839 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 EMID1Q96A84 441 aaPredicted RBP8.08□□□□□ -1.12
SMAD1-213ENST00000514778 SHISA4Q96DD7 197 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 LRCH3Q96II8 777 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 AIFM3Q96NN9 605 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 PURBQ96QR8 312 aaKnown RBP8.08□□□□□ -1.12
SMAD1-213ENST00000514778 SENP7Q9BQF6 1050 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 WDR11Q9BZH6 1224 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 UNC93B1Q9H1C4 597 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 SPC25Q9HBM1 224 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 JADE2Q9NQC1 790 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 OGDHLQ9ULD0 1010 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 UBIAD1Q9Y5Z9 338 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 MYH6P13533 1939 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 PLXNA1Q9UIW2 1896 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 CCDC194A0A1B0GVG4 234 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 MEIS1O00470 390 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 KPNA6O60684 536 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 PPFIA3O75145 1194 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 MYCLP12524 364 aaPredicted RBP8.07□□□□□ -1.12
SMAD1-213ENST00000514778 U2AF2P26368 475 aaKnown RBP eCLIP8.07□□□□□ -1.12
SMAD1-213ENST00000514778 CST5P28325 142 aaPredicted RBP8.07□□□□□ -1.12
SMAD1-213ENST00000514778 CNGA1P29973 690 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 CCND3P30281 292 aaPredicted RBP8.07□□□□□ -1.12
SMAD1-213ENST00000514778 TRAPPC10P48553 1259 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 GJA9P57773 515 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 MRPS9P82933 396 aaKnown RBP8.07□□□□□ -1.12
SMAD1-213ENST00000514778 LAMC2Q13753 1193 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 NEDD9Q14511 834 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 MTFR1Q15390 333 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 BRDTQ58F21 947 aaPredicted RBP8.07□□□□□ -1.12
SMAD1-213ENST00000514778 PRAMEF19Q5SWL8 479 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 JAKMIP3Q5VZ66 844 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 RNF180Q86T96 592 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 FBXO16Q8IX29 292 aaPredicted RBP8.07□□□□□ -1.12
SMAD1-213ENST00000514778 DIS3L2Q8IYB7 885 aaKnown RBP8.07□□□□□ -1.12
SMAD1-213ENST00000514778 U2AF1L4Q8WU68 220 aaKnown RBP8.07□□□□□ -1.12
SMAD1-213ENST00000514778 TNFRSF25Q93038 417 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 MXRA8Q9BRK3 442 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 TSEN34Q9BSV6 310 aaKnown RBP8.07□□□□□ -1.12
SMAD1-213ENST00000514778 SEZ6LQ9BYH1 1024 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 AP5M1Q9H0R1 490 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 UPF3AQ9H1J1 476 aaKnown RBP8.07□□□□□ -1.12
SMAD1-213ENST00000514778 XPNPEP3Q9NQH7 507 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 TMEM260Q9NX78 707 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 TSR3Q9UJK0 312 aaKnown RBP8.07□□□□□ -1.12
SMAD1-213ENST00000514778 DDX41Q9UJV9 622 aaKnown RBP8.07□□□□□ -1.12
SMAD1-213ENST00000514778 ZHX1Q9UKY1 873 aaPredicted RBP8.07□□□□□ -1.12
SMAD1-213ENST00000514778 KCNJ14Q9UNX9 436 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 GNEQ9Y223 722 aaKnown RBP8.07□□□□□ -1.12
SMAD1-213ENST00000514778 MRVI1Q9Y6F6 885 aa8.07□□□□□ -1.12
SMAD1-213ENST00000514778 LRRC37A2A6NM11 1700 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 NFASCO94856 1347 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 ZNFX1Q9P2E3 1918 aaKnown RBP8.06□□□□□ -1.12
SMAD1-213ENST00000514778 BTBD18B2RXH4 712 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 H3BQV1 296 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 DNM1LO00429 736 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 TBX3O15119 743 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 ZEB2O60315 1214 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 GH1P01241 217 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 HSP90AA1P07900 732 aaKnown RBP8.06□□□□□ -1.12
SMAD1-213ENST00000514778 TXNP10599 105 aaKnown RBP8.06□□□□□ -1.12
SMAD1-213ENST00000514778 SMPD1P17405 629 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 ITGB5P18084 799 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 ZNF76P36508 570 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 ADCYAP1R1P41586 468 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 CPT1AP50416 773 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 MTMR1Q13613 665 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 Q4G0T1 1027 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 LARP1BQ659C4 914 aaKnown RBP8.06□□□□□ -1.12
SMAD1-213ENST00000514778 NEK8Q86SG6 692 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 NOSTRINQ8IVI9 506 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 PCSK9Q8NBP7 692 aaKnown RBP8.06□□□□□ -1.12
SMAD1-213ENST00000514778 KLHDC9Q8NEP7 349 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 IL31RAQ8NI17 732 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 TBCKQ8TEA7 893 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 MBOAT7Q96N66 472 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 DEFB118Q96PH6 123 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 TSHZ2Q9NRE2 1034 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 TBC1D22BQ9NU19 505 aa8.06□□□□□ -1.12
SMAD1-213ENST00000514778 LCTP09848 1927 aa8.05□□□□□ -1.12
SMAD1-213ENST00000514778 IGLV3-22A0A075B6J6 115 aa8.05□□□□□ -1.12
SMAD1-213ENST00000514778 MOXD2PA6NHM9 499 aa8.05□□□□□ -1.12
SMAD1-213ENST00000514778 A6NJR5 290 aa8.05□□□□□ -1.12
SMAD1-213ENST00000514778 ADAMTS4O75173 837 aa8.05□□□□□ -1.12
SMAD1-213ENST00000514778 PPFIA4O75335 1185 aa8.05□□□□□ -1.12
SMAD1-213ENST00000514778 CABYRO75952 493 aa8.05□□□□□ -1.12
SMAD1-213ENST00000514778 TFRCP02786 760 aaKnown RBP8.05□□□□□ -1.12
SMAD1-213ENST00000514778 GNL2Q13823 731 aaKnown RBP8.05□□□□□ -1.12
SMAD1-213ENST00000514778 CELF3Q5SZQ8 465 aaKnown RBP8.05□□□□□ -1.12
SMAD1-213ENST00000514778 MYSM1Q5VVJ2 828 aa8.05□□□□□ -1.12
SMAD1-213ENST00000514778 METTL7BQ6UX53 244 aa8.05□□□□□ -1.12
SMAD1-213ENST00000514778 SEPT14Q6ZU15 432 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms