RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 IL17RAQ96F46 866 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 TSNARE1Q96NA8 513 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 ANAPC4Q9UJX5 808 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 PPP1R9AQ9ULJ8 1098 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 ENO4A6NNW6 628 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 CASQ2O14958 399 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-211ENST00000513346 FOXN1O15353 648 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 XRCC5P13010 732 aaKnown RBP12.23□□□□□ -0.45
TCOF1-211ENST00000513346 ADD2P35612 726 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 COG7P83436 770 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 CEP120Q8N960 986 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 LRRIQ3A6PVS8 624 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-211ENST00000513346 DKC1O60832 514 aaKnown RBP eCLIP12.22□□□□□ -0.45
TCOF1-211ENST00000513346 HARSP12081 509 aaKnown RBP12.22□□□□□ -0.45
TCOF1-211ENST00000513346 FERP16591 822 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 PLCB4Q15147 1175 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 ERFEQ4G0M1 354 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 DPH6Q7L8W6 267 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 SDCCAG8Q86SQ7 713 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-211ENST00000513346 SGSM3Q96HU1 749 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 ARMCX3Q9UH62 379 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-211ENST00000513346 SNX12Q9UMY4 172 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 SMCO2A6NFE2 343 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 SLCO1A2P46721 670 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 R3HDM1Q15032 1099 aaKnown RBP12.22□□□□□ -0.45
TCOF1-211ENST00000513346 CFAP157Q5JU67 520 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 SYNE4Q8N205 404 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 KIFAP3Q92845 792 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 KIFC2Q96AC6 838 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 VPS37BQ9H9H4 285 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 MLXIPQ9HAP2 919 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 BIN2Q9UBW5 565 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-211ENST00000513346 MYO3AQ8NEV4 1616 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 NOP56O00567 594 aaKnown RBP12.22□□□□□ -0.45
TCOF1-211ENST00000513346 SERPING1P05155 500 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 MMP10P09238 476 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 OR52Z1P0C646 297 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 LIFRP42702 1097 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 TXNRD1Q16881 649 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 BRDTQ58F21 947 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-211ENST00000513346 TRIM65Q6PJ69 517 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 SLC30A9Q6PML9 568 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 SCYL3Q8IZE3 742 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 ANKRD35Q8N283 1001 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 SPZ1Q9BXG8 430 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 TAF1DQ9H5J8 278 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-211ENST00000513346 CDHR2Q9BYE9 1310 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 DDX39AO00148 427 aaKnown RBP12.22□□□□□ -0.45
TCOF1-211ENST00000513346 PPFIA2O75334 1257 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 FAM107AO95990 144 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 FMR1Q06787 632 aaKnown RBP eCLIP12.22□□□□□ -0.451e-6■■■■□ 20.4
TCOF1-211ENST00000513346 C10orf76Q5T2E6 689 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 SULF1Q8IWU6 871 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 UIMC1Q96RL1 719 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 NDST4Q9H3R1 872 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 GDAQ9Y2T3 454 aa12.22□□□□□ -0.45
TCOF1-211ENST00000513346 ABCC12Q96J65 1359 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 TCP10L2B9ZVM9 353 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 PRKAB2O43741 272 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 LMNAP02545 664 aaKnown RBP12.21□□□□□ -0.45
TCOF1-211ENST00000513346 BCRP11274 1271 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 PPP1R21Q6ZMI0 780 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 FNBP1Q96RU3 617 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 AP1M1Q9BXS5 423 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 ADD3Q9UEY8 706 aaKnown RBP12.21□□□□□ -0.45
TCOF1-211ENST00000513346 ITIH6Q6UXX5 1313 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 SNAP23O00161 211 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 PSMD14O00487 310 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 MAP3K7O43318 606 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 ATP5HO75947 161 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 CASP1P29466 404 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 CDC25AP30304 524 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 ADCY8P40145 1251 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 FXR1P51114 621 aaKnown RBP eCLIP12.21□□□□□ -0.45
TCOF1-211ENST00000513346 CERKLQ49MI3 558 aaPredicted RBP12.21□□□□□ -0.45
TCOF1-211ENST00000513346 SUSD4Q5VX71 490 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 DCAF15Q66K64 600 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 APBB1IPQ7Z5R6 666 aaPredicted RBP12.21□□□□□ -0.45
TCOF1-211ENST00000513346 GRK7Q8WTQ7 553 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 ATP8A2Q9NTI2 1148 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 RAB21Q9UL25 225 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 DNM3Q9UQ16 869 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 ADAMTS13Q76LX8 1427 aa12.21□□□□□ -0.45
TCOF1-211ENST00000513346 A0A1W2PQC6 194 aa12.21□□□□□ -0.46
TCOF1-211ENST00000513346 KIF28PB7ZC32 967 aa12.21□□□□□ -0.46
TCOF1-211ENST00000513346 PPEF1O14829 653 aaPredicted RBP12.21□□□□□ -0.46
TCOF1-211ENST00000513346 CA8P35219 290 aa12.21□□□□□ -0.46
TCOF1-211ENST00000513346 TECP42680 631 aa12.21□□□□□ -0.46
TCOF1-211ENST00000513346 STRN3Q13033 797 aa12.21□□□□□ -0.46
TCOF1-211ENST00000513346 TTLL6Q8N841 843 aa12.21□□□□□ -0.46
TCOF1-211ENST00000513346 DCPSQ96C86 337 aaKnown RBP12.21□□□□□ -0.46
TCOF1-211ENST00000513346 CHP1Q99653 195 aa12.21□□□□□ -0.46
TCOF1-211ENST00000513346 FAF1Q9UNN5 650 aaPredicted RBP12.21□□□□□ -0.46
TCOF1-211ENST00000513346 CSADQ9Y600 493 aa12.21□□□□□ -0.46
TCOF1-211ENST00000513346 PIK3C2BO00750 1634 aa12.21□□□□□ -0.46
TCOF1-211ENST00000513346 GRID2IPA4D2P6 1211 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 ARHGAP42A6NI28 874 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 KLRF2D3W0D1 207 aa12.2□□□□□ -0.46
TCOF1-211ENST00000513346 SART1O43290 800 aaKnown RBP12.2□□□□□ -0.46
TCOF1-211ENST00000513346 PALMO75781 387 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms