RNA–Protein interactions for RNA: ENST00000513205.5

PPARGC1A-211, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-211ENST00000513205 SKILP12757 684 aa9.59□□□□□ -0.87
PPARGC1A-211ENST00000513205 ASIC1P78348 528 aa9.59□□□□□ -0.87
PPARGC1A-211ENST00000513205 FMR1Q06787 632 aaKnown RBP eCLIP9.59□□□□□ -0.87
PPARGC1A-211ENST00000513205 KIF4BQ2VIQ3 1234 aa9.59□□□□□ -0.87
PPARGC1A-211ENST00000513205 NBPF9Q3BBW0 867 aa9.59□□□□□ -0.87
PPARGC1A-211ENST00000513205 DNTTIP2Q5QJE6 756 aaKnown RBP9.59□□□□□ -0.87
PPARGC1A-211ENST00000513205 ISM2Q6H9L7 571 aa9.59□□□□□ -0.87
PPARGC1A-211ENST00000513205 TMC6Q7Z403 805 aa9.59□□□□□ -0.87
PPARGC1A-211ENST00000513205 GPC2Q8N158 579 aa9.59□□□□□ -0.87
PPARGC1A-211ENST00000513205 CACTINQ8WUQ7 758 aaKnown RBP9.59□□□□□ -0.87
PPARGC1A-211ENST00000513205 RAD54LQ92698 747 aa9.59□□□□□ -0.87
PPARGC1A-211ENST00000513205 TEPSINQ96N21 525 aa9.59□□□□□ -0.87
PPARGC1A-211ENST00000513205 WDR18Q9BV38 432 aa9.59□□□□□ -0.87
PPARGC1A-211ENST00000513205 ZNF341Q9BYN7 854 aa9.59□□□□□ -0.87
PPARGC1A-211ENST00000513205 RTN4Q9NQC3 1192 aaKnown RBP9.59□□□□□ -0.87
PPARGC1A-211ENST00000513205 LIMA1Q9UHB6 759 aaKnown RBP9.59□□□□□ -0.87
PPARGC1A-211ENST00000513205 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.59□□□□□ -0.87
PPARGC1A-211ENST00000513205 A0A087WWV3 80 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 USP17L15C9J2P7 530 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 USP17L13C9JLJ4 530 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 USP17L11C9JVI0 530 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 USP17L18D6R9N7 530 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 USP17L22D6RA61 530 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 USP17L17D6RBQ6 530 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 USP17L19D6RCP7 530 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 USP17L20D6RJB6 530 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 ARHGAP6O43182 974 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 KLRC4O43908 158 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 STX10O60499 249 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 ATP1A3P13637 1013 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 LMNB1P20700 586 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 CCNE1P24864 410 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 OAZ1P54368 228 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 LRRC63Q05C16 580 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 USP17L24Q0WX57 530 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 GRB10Q13322 594 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 NR1I3Q14994 352 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 UBE2SQ16763 222 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 CCDC144BQ3MJ40 725 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 FAM83BQ5T0W9 1011 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 USP17L6PQ6QN14 398 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 NIPA1Q7RTP0 329 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 MYPNQ86TC9 1320 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 CNGA4Q8IV77 575 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 SCUBE3Q8IX30 993 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 ETNPPLQ8TBG4 499 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 NEK9Q8TD19 979 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 NELFBQ8WX92 580 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 HAS1Q92839 578 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 C12orf42Q96LP6 360 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 SLF1Q9BQI6 1058 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 MMTAG2Q9BU76 263 aaKnown RBP9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 WDR11Q9BZH6 1224 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 AAASQ9NRG9 546 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 MAGEC2Q9UBF1 373 aaPredicted RBP9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 ADD3Q9UEY8 706 aaKnown RBP9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 CNOT7Q9UIV1 285 aaKnown RBP9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 ZNF112Q9UJU3 913 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 CTNND2Q9UQB3 1225 aa9.58□□□□□ -0.88
PPARGC1A-211ENST00000513205 A0A1W2PQC6 194 aa9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 C19orf81C9J6K1 198 aa9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 BCRP11274 1271 aa9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 RPA1P27694 616 aa9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 ECE1P42892 770 aa9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 GMPSP49915 693 aaPredicted RBP9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 CCZ1BP86790 482 aa9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 CCZ1P86791 482 aaPredicted RBP9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 PDE4DQ08499 809 aa9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 RRP1BQ14684 758 aaKnown RBP9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 SUPT20HL1Q3ZLR7 823 aa9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 KLHL10Q6JEL2 608 aa9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 XRRA1Q6P2D8 792 aa9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 CCDC65Q8IXS2 484 aa9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 SCYL3Q8IZE3 742 aa9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 GUF1Q8N442 669 aaKnown RBP9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 POLR3CQ9BUI4 534 aaPredicted RBP9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 BLZF1Q9H2G9 400 aa9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 KCND2Q9NZV8 630 aa9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 PAXBP1Q9Y5B6 917 aa9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 BAZ2BQ9UIF8 2168 aaKnown RBP9.57□□□□□ -0.88
PPARGC1A-211ENST00000513205 PP2D1A8MPX8 630 aa9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 ZSCAN12O43309 604 aa9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 EDIL3O43854 480 aa9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 CDC25AP30304 524 aa9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 ZNF76P36508 570 aa9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 CCT6AP40227 531 aaKnown RBP9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 PRCPP42785 496 aa9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 HSD17B4P51659 736 aa9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 TBX2Q13207 712 aaPredicted RBP9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 USH1GQ495M9 461 aa9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 TCP11X2Q5H9J9 407 aa9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 NOL9Q5SY16 702 aaKnown RBP9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 LCE2AQ5TA79 106 aaPredicted RBP9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 TREML4Q6UXN2 200 aa9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 ARHGAP27Q6ZUM4 889 aa9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 PPFIBP1Q86W92 1011 aa9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 RETREG2Q8NC44 543 aa9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 ACER1Q8TDN7 264 aa9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 P2RX5Q93086 422 aa9.56□□□□□ -0.88
PPARGC1A-211ENST00000513205 TRIM47Q96LD4 638 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms