RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 DEFB128Q7Z7B8 93 aa11.82□□□□□ -0.52
PFDN1-203ENST00000510217 CAGE1Q8TC20 777 aa11.82□□□□□ -0.52
PFDN1-203ENST00000510217 TIFAQ96CG3 184 aa11.82□□□□□ -0.52
PFDN1-203ENST00000510217 MTIF3Q9H2K0 278 aaKnown RBP11.82□□□□□ -0.52
PFDN1-203ENST00000510217 MLXIPQ9HAP2 919 aa11.82□□□□□ -0.52
PFDN1-203ENST00000510217 NOD1Q9Y239 953 aa11.82□□□□□ -0.52
PFDN1-203ENST00000510217 TELO2Q9Y4R8 837 aa11.82□□□□□ -0.52
PFDN1-203ENST00000510217 EYSQ5T1H1 3165 aa11.82□□□□□ -0.52
PFDN1-203ENST00000510217 STXBP3O00186 592 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 PPFIA4O75335 1185 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 ITGB5P18084 799 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 RPS6KB1P23443 525 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 HOXC8P31273 242 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 RFC2P35250 354 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 METAP2P50579 478 aaKnown RBP eCLIP11.81□□□□□ -0.52
PFDN1-203ENST00000510217 NAPAP54920 295 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 ZNF200P98182 395 aaPredicted RBP11.81□□□□□ -0.52
PFDN1-203ENST00000510217 APOBRQ0VD83 1088 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 BFSP2Q13515 415 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 NEDD9Q14511 834 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 PPP1R18Q6NYC8 613 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 BLOC1S2Q6QNY1 142 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 Q6ZUG5 572 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 CYFIP1Q7L576 1253 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 RPUSD2Q8IZ73 545 aaKnown RBP11.81□□□□□ -0.52
PFDN1-203ENST00000510217 CCDC155Q8N6L0 562 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 C7orf31Q8N865 590 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 BRF1Q92994 677 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 WNT8BQ93098 351 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 GPRASP2Q96D09 838 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 TBC1D32Q96NH3 1257 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 GPR20Q99678 358 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 AGXT2Q9BYV1 514 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 PCDHA6Q9UN73 950 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 PCDHA8Q9Y5H6 950 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 TET1Q8NFU7 2136 aa11.81□□□□□ -0.52
PFDN1-203ENST00000510217 SPDYE3A6NKU9 549 aa11.8□□□□□ -0.52
PFDN1-203ENST00000510217 RBAK-RBAKDNI3L0D1 243 aa11.8□□□□□ -0.52
PFDN1-203ENST00000510217 hCG_1984214I3L0E3 225 aa11.8□□□□□ -0.52
PFDN1-203ENST00000510217 NOP56O00567 594 aaKnown RBP11.8□□□□□ -0.52
PFDN1-203ENST00000510217 KCNA2P16389 499 aa11.8□□□□□ -0.52
PFDN1-203ENST00000510217 PTK7Q13308 1070 aa11.8□□□□□ -0.52
PFDN1-203ENST00000510217 GPNMBQ14956 572 aa11.8□□□□□ -0.52
PFDN1-203ENST00000510217 TRIM71Q2Q1W2 868 aaKnown RBP11.8□□□□□ -0.52
PFDN1-203ENST00000510217 TRAF7Q6Q0C0 670 aa11.8□□□□□ -0.52
PFDN1-203ENST00000510217 NLRX1Q86UT6 975 aa11.8□□□□□ -0.52
PFDN1-203ENST00000510217 TRIM50Q86XT4 487 aa11.8□□□□□ -0.52
PFDN1-203ENST00000510217 FBXL16Q8N461 479 aa11.8□□□□□ -0.52
PFDN1-203ENST00000510217 ZNF713Q8N859 430 aaPredicted RBP11.8□□□□□ -0.52
PFDN1-203ENST00000510217 AFAP1L1Q8TED9 768 aa11.8□□□□□ -0.52
PFDN1-203ENST00000510217 MYLIPQ8WY64 445 aa11.8□□□□□ -0.52
PFDN1-203ENST00000510217 SENP7Q9BQF6 1050 aa11.8□□□□□ -0.52
PFDN1-203ENST00000510217 RIC8AQ9NPQ8 531 aa11.8□□□□□ -0.52
PFDN1-203ENST00000510217 BARHL2Q9NY43 387 aa11.8□□□□□ -0.52
PFDN1-203ENST00000510217 YBX2Q9Y2T7 364 aaKnown RBP11.8□□□□□ -0.52
PFDN1-203ENST00000510217 UBIAD1Q9Y5Z9 338 aa11.8□□□□□ -0.52
PFDN1-203ENST00000510217 V9GY48 417 aaPredicted RBP11.8□□□□□ -0.52
PFDN1-203ENST00000510217 SIP14410 1827 aa11.8□□□□□ -0.52
PFDN1-203ENST00000510217 CHD9Q3L8U1 2897 aa11.79□□□□□ -0.52
PFDN1-203ENST00000510217 ZBBXA8MT70 800 aa11.79□□□□□ -0.52
PFDN1-203ENST00000510217 H3BRB1 525 aa11.79□□□□□ -0.52
PFDN1-203ENST00000510217 ATP9AO75110 1047 aa11.79□□□□□ -0.52
PFDN1-203ENST00000510217 CKBP12277 381 aa11.79□□□□□ -0.52
PFDN1-203ENST00000510217 SELPP16109 830 aa11.79□□□□□ -0.52
PFDN1-203ENST00000510217 ADD1P35611 737 aaKnown RBP11.79□□□□□ -0.52
PFDN1-203ENST00000510217 CLK2P49760 499 aaKnown RBP11.79□□□□□ -0.52
PFDN1-203ENST00000510217 ADCY7P51828 1080 aa11.79□□□□□ -0.52
PFDN1-203ENST00000510217 FGD1P98174 961 aa11.79□□□□□ -0.52
PFDN1-203ENST00000510217 SP4Q02446 784 aa11.79□□□□□ -0.52
PFDN1-203ENST00000510217 GRIN2CQ14957 1233 aa11.79□□□□□ -0.52
PFDN1-203ENST00000510217 LRRC8DQ7L1W4 858 aa11.79□□□□□ -0.52
PFDN1-203ENST00000510217 PLCD3Q8N3E9 789 aa11.79□□□□□ -0.52
PFDN1-203ENST00000510217 RETREG2Q8NC44 543 aa11.79□□□□□ -0.52
PFDN1-203ENST00000510217 PGBD1Q96JS3 809 aa11.79□□□□□ -0.52
PFDN1-203ENST00000510217 ZNF576Q9H609 170 aa11.79□□□□□ -0.52
PFDN1-203ENST00000510217 TUT1Q9H6E5 874 aaKnown RBP11.79□□□□□ -0.52
PFDN1-203ENST00000510217 NAP1L2Q9ULW6 460 aaPredicted RBP11.79□□□□□ -0.52
PFDN1-203ENST00000510217 SLC4A7Q9Y6M7 1214 aa11.79□□□□□ -0.52
PFDN1-203ENST00000510217 EPB41L2O43491 1005 aaKnown RBP11.78□□□□□ -0.52
PFDN1-203ENST00000510217 SMIM10L2AP0DMW4 78 aa11.78□□□□□ -0.52
PFDN1-203ENST00000510217 SMIM10L2BP0DMW5 78 aa11.78□□□□□ -0.52
PFDN1-203ENST00000510217 FOSL2P15408 326 aa11.78□□□□□ -0.52
PFDN1-203ENST00000510217 ATP2A2P16615 1042 aaKnown RBP11.78□□□□□ -0.52
PFDN1-203ENST00000510217 PSMA5P28066 241 aa11.78□□□□□ -0.52
PFDN1-203ENST00000510217 RABGGTBP53611 331 aa11.78□□□□□ -0.52
PFDN1-203ENST00000510217 MTMR1Q13613 665 aa11.78□□□□□ -0.52
PFDN1-203ENST00000510217 RAB30Q15771 203 aa11.78□□□□□ -0.52
PFDN1-203ENST00000510217 PFKFB3Q16875 520 aaPredicted RBP11.78□□□□□ -0.52
PFDN1-203ENST00000510217 SERINC5Q86VE9 423 aa11.78□□□□□ -0.52
PFDN1-203ENST00000510217 TEX2Q8IWB9 1127 aa11.78□□□□□ -0.52
PFDN1-203ENST00000510217 CDHR1Q96JP9 859 aa11.78□□□□□ -0.52
PFDN1-203ENST00000510217 USP26Q9BXU7 913 aa11.78□□□□□ -0.52
PFDN1-203ENST00000510217 ANO3Q9BYT9 981 aa11.78□□□□□ -0.52
PFDN1-203ENST00000510217 NKX2-4Q9H2Z4 354 aa11.78□□□□□ -0.52
PFDN1-203ENST00000510217 EHMT1Q9H9B1 1298 aa11.78□□□□□ -0.52
PFDN1-203ENST00000510217 JADE2Q9NQC1 790 aa11.78□□□□□ -0.52
PFDN1-203ENST00000510217 TMEM260Q9NX78 707 aa11.78□□□□□ -0.52
PFDN1-203ENST00000510217 COL4A4P53420 1690 aaPredicted RBP11.78□□□□□ -0.52
PFDN1-203ENST00000510217 MICAL3Q7RTP6 2002 aa11.77□□□□□ -0.52
PFDN1-203ENST00000510217 CCDC196A0A1B0GTZ2 297 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms