RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 CHMLP26374 656 aa17.15■□□□□ 0.34
SMAD5-206ENST00000509962 PDE4AP27815 886 aa17.15■□□□□ 0.34
SMAD5-206ENST00000509962 TROAPQ12815 778 aa17.15■□□□□ 0.34
SMAD5-206ENST00000509962 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMAD5-206ENST00000509962 PIBF1Q8WXW3 757 aa17.15■□□□□ 0.34
SMAD5-206ENST00000509962 BCAS3Q9H6U6 928 aa17.15■□□□□ 0.34
SMAD5-206ENST00000509962 SENP2Q9HC62 589 aa17.15■□□□□ 0.34
SMAD5-206ENST00000509962 RTEL1Q9NZ71 1219 aa17.15■□□□□ 0.34
SMAD5-206ENST00000509962 SPATA31C2B4DYI2 1134 aa17.14■□□□□ 0.33
SMAD5-206ENST00000509962 TREHO43280 583 aa17.14■□□□□ 0.33
SMAD5-206ENST00000509962 LGALS2P05162 132 aa17.14■□□□□ 0.33
SMAD5-206ENST00000509962 SMIM10L2AP0DMW4 78 aa17.14■□□□□ 0.33
SMAD5-206ENST00000509962 SMIM10L2BP0DMW5 78 aa17.14■□□□□ 0.33
SMAD5-206ENST00000509962 ICAM3P32942 547 aa17.14■□□□□ 0.33
SMAD5-206ENST00000509962 MRPS9P82933 396 aaKnown RBP17.14■□□□□ 0.33
SMAD5-206ENST00000509962 CYFIP1Q7L576 1253 aa17.14■□□□□ 0.33
SMAD5-206ENST00000509962 MYOCDQ8IZQ8 938 aa17.14■□□□□ 0.33
SMAD5-206ENST00000509962 CUL5Q93034 780 aa17.14■□□□□ 0.33
SMAD5-206ENST00000509962 PLEKHG4Q58EX7 1191 aa17.13■□□□□ 0.33
SMAD5-206ENST00000509962 METTL7BQ6UX53 244 aa17.13■□□□□ 0.33
SMAD5-206ENST00000509962 SMARCC2Q8TAQ2 1214 aa17.13■□□□□ 0.33
SMAD5-206ENST00000509962 IGDCC4Q8TDY8 1250 aa17.13■□□□□ 0.33
SMAD5-206ENST00000509962 SEPT8Q92599 483 aa17.13■□□□□ 0.33
SMAD5-206ENST00000509962 RRP36Q96EU6 259 aaKnown RBP17.13■□□□□ 0.33
SMAD5-206ENST00000509962 INPP4AQ96PE3 977 aaPredicted RBP17.13■□□□□ 0.33
SMAD5-206ENST00000509962 SETD4Q9NVD3 440 aa17.13■□□□□ 0.33
SMAD5-206ENST00000509962 RAPGEFL1Q9UHV5 662 aa17.13■□□□□ 0.33
SMAD5-206ENST00000509962 REV3LO60673 3130 aa17.12■□□□□ 0.33
SMAD5-206ENST00000509962 FIBPO43427 364 aa17.12■□□□□ 0.33
SMAD5-206ENST00000509962 CAND2O75155 1236 aa17.12■□□□□ 0.33
SMAD5-206ENST00000509962 KIF5BP33176 963 aa17.12■□□□□ 0.33
SMAD5-206ENST00000509962 FBXO22Q8NEZ5 403 aa17.12■□□□□ 0.33
SMAD5-206ENST00000509962 CTCFLQ8NI51 663 aaPredicted RBP17.12■□□□□ 0.33
SMAD5-206ENST00000509962 GPR20Q99678 358 aa17.12■□□□□ 0.33
SMAD5-206ENST00000509962 ZNF215Q9UL58 517 aaPredicted RBP17.12■□□□□ 0.33
SMAD5-206ENST00000509962 UPP2O95045 317 aa17.11■□□□□ 0.33
SMAD5-206ENST00000509962 HOXC8P31273 242 aa17.11■□□□□ 0.33
SMAD5-206ENST00000509962 HTRA4P83105 476 aaPredicted RBP17.11■□□□□ 0.33
SMAD5-206ENST00000509962 UTP14CQ5TAP6 766 aaKnown RBP17.11■□□□□ 0.33
SMAD5-206ENST00000509962 XRRA1Q6P2D8 792 aa17.11■□□□□ 0.33
SMAD5-206ENST00000509962 USP17L6PQ6QN14 398 aa17.11■□□□□ 0.33
SMAD5-206ENST00000509962 NLRX1Q86UT6 975 aa17.11■□□□□ 0.33
SMAD5-206ENST00000509962 MAP4K1Q92918 833 aa17.11■□□□□ 0.33
SMAD5-206ENST00000509962 MAP3K14Q99558 947 aa17.11■□□□□ 0.33
SMAD5-206ENST00000509962 C17orf80Q9BSJ5 609 aa17.11■□□□□ 0.33
SMAD5-206ENST00000509962 SEC63Q9UGP8 760 aaKnown RBP17.11■□□□□ 0.33
SMAD5-206ENST00000509962 TAF6LQ9Y6J9 622 aa17.11■□□□□ 0.33
SMAD5-206ENST00000509962 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.1■□□□□ 0.33
SMAD5-206ENST00000509962 RBAK-RBAKDNI3L0D1 243 aa17.1■□□□□ 0.33
SMAD5-206ENST00000509962 SGSM2O43147 1006 aa17.1■□□□□ 0.33
SMAD5-206ENST00000509962 CTSHP09668 335 aa17.1■□□□□ 0.33
SMAD5-206ENST00000509962 SMARCA1P28370 1054 aa17.1■□□□□ 0.33
SMAD5-206ENST00000509962 PCNX4Q63HM2 1172 aa17.1■□□□□ 0.33
SMAD5-206ENST00000509962 CASC1Q6TDU7 716 aa17.1■□□□□ 0.33
SMAD5-206ENST00000509962 TMTC2Q8N394 836 aa17.1■□□□□ 0.33
SMAD5-206ENST00000509962 GIMAP8Q8ND71 665 aaPredicted RBP17.1■□□□□ 0.33
SMAD5-206ENST00000509962 TOP1MTQ969P6 601 aa17.1■□□□□ 0.33
SMAD5-206ENST00000509962 SAMD11Q96NU1 681 aa17.1■□□□□ 0.33
SMAD5-206ENST00000509962 YME1L1Q96TA2 773 aa17.1■□□□□ 0.33
SMAD5-206ENST00000509962 SENP7Q9BQF6 1050 aa17.1■□□□□ 0.33
SMAD5-206ENST00000509962 LZTS2Q9BRK4 669 aa17.1■□□□□ 0.33
SMAD5-206ENST00000509962 SPZ1Q9BXG8 430 aa17.1■□□□□ 0.33
SMAD5-206ENST00000509962 EPHX3Q9H6B9 360 aa17.1■□□□□ 0.33
SMAD5-206ENST00000509962 SUPT16HQ9Y5B9 1047 aaKnown RBP17.1■□□□□ 0.33
SMAD5-206ENST00000509962 FRMPD4Q14CM0 1322 aa17.1■□□□□ 0.33
SMAD5-206ENST00000509962 COL4A4P53420 1690 aaPredicted RBP17.1■□□□□ 0.33
SMAD5-206ENST00000509962 GNAQP50148 359 aa17.09■□□□□ 0.33
SMAD5-206ENST00000509962 ANTXR2P58335 489 aa17.09■□□□□ 0.33
SMAD5-206ENST00000509962 ARHGAP4P98171 946 aa17.09■□□□□ 0.33
SMAD5-206ENST00000509962 SP4Q02446 784 aa17.09■□□□□ 0.33
SMAD5-206ENST00000509962 SEMA3FQ13275 785 aa17.09■□□□□ 0.33
SMAD5-206ENST00000509962 MKRN4PQ13434 485 aaPredicted RBP17.09■□□□□ 0.33
SMAD5-206ENST00000509962 PTPROQ16827 1216 aa17.09■□□□□ 0.33
SMAD5-206ENST00000509962 NFXL1Q6ZNB6 911 aa17.09■□□□□ 0.33
SMAD5-206ENST00000509962 MB21D2Q8IYB1 491 aaPredicted RBP17.09■□□□□ 0.33
SMAD5-206ENST00000509962 ZNF654Q8IZM8 581 aa17.09■□□□□ 0.33
SMAD5-206ENST00000509962 SP7Q8TDD2 431 aaPredicted RBP17.09■□□□□ 0.33
SMAD5-206ENST00000509962 APBB2Q92870 758 aa17.09■□□□□ 0.33
SMAD5-206ENST00000509962 UBE2ZQ9H832 354 aaPredicted RBP17.09■□□□□ 0.33
SMAD5-206ENST00000509962 MUC3AQ02505 3323 aa17.09■□□□□ 0.33
SMAD5-206ENST00000509962 SIP14410 1827 aa17.08■□□□□ 0.33
SMAD5-206ENST00000509962 NRCAMQ92823 1304 aa17.08■□□□□ 0.32
SMAD5-206ENST00000509962 PIK3CDO00329 1044 aa17.08■□□□□ 0.32
SMAD5-206ENST00000509962 MEIS2O14770 477 aa17.08■□□□□ 0.32
SMAD5-206ENST00000509962 DDAH1O94760 285 aa17.08■□□□□ 0.32
SMAD5-206ENST00000509962 EPC2Q52LR7 807 aa17.08■□□□□ 0.32
SMAD5-206ENST00000509962 MRPL38Q96DV4 380 aaKnown RBP17.08■□□□□ 0.32
SMAD5-206ENST00000509962 MTA3Q9BTC8 594 aa17.08■□□□□ 0.32
SMAD5-206ENST00000509962 MYL10Q9BUA6 226 aa17.08■□□□□ 0.32
SMAD5-206ENST00000509962 PSTPIP2Q9H939 334 aa17.08■□□□□ 0.32
SMAD5-206ENST00000509962 LY9Q9HBG7 655 aa17.08■□□□□ 0.32
SMAD5-206ENST00000509962 RBM8AQ9Y5S9 174 aaKnown RBP17.08■□□□□ 0.32
SMAD5-206ENST00000509962 MICAL3Q7RTP6 2002 aa17.08■□□□□ 0.32
SMAD5-206ENST00000509962 KAT6AQ92794 2004 aa17.08■□□□□ 0.32
SMAD5-206ENST00000509962 CCDC69A6NI79 296 aa17.07■□□□□ 0.32
SMAD5-206ENST00000509962 GPM6BQ13491 265 aa17.07■□□□□ 0.32
SMAD5-206ENST00000509962 FAM26DQ5JW98 314 aa17.07■□□□□ 0.32
SMAD5-206ENST00000509962 TRIM50Q86XT4 487 aa17.07■□□□□ 0.32
SMAD5-206ENST00000509962 FAM122AQ96E09 287 aa17.07■□□□□ 0.32
SMAD5-206ENST00000509962 CDHR1Q96JP9 859 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms