RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 ECM1Q16610 540 aa8.74□□□□□ -1.01
SSBP2-213ENST00000509743 TKFCQ3LXA3 575 aa8.74□□□□□ -1.01
SSBP2-213ENST00000509743 POTEGQ6S5H5 508 aa8.74□□□□□ -1.01
SSBP2-213ENST00000509743 POTEEQ6S8J3 1075 aa8.74□□□□□ -1.01
SSBP2-213ENST00000509743 MYOCDQ8IZQ8 938 aa8.74□□□□□ -1.01
SSBP2-213ENST00000509743 TC2NQ8N9U0 490 aa8.74□□□□□ -1.01
SSBP2-213ENST00000509743 RBM46Q8TBY0 533 aaKnown RBP8.74□□□□□ -1.01
SSBP2-213ENST00000509743 TBC1D5Q92609 795 aa8.74□□□□□ -1.01
SSBP2-213ENST00000509743 GJA10Q969M2 543 aa8.74□□□□□ -1.01
SSBP2-213ENST00000509743 DCPSQ96C86 337 aaKnown RBP8.74□□□□□ -1.01
SSBP2-213ENST00000509743 CNOT6LQ96LI5 555 aaKnown RBP8.74□□□□□ -1.01
SSBP2-213ENST00000509743 EIF2AK1Q9BQI3 630 aaKnown RBP8.74□□□□□ -1.01
SSBP2-213ENST00000509743 ZNF577Q9BSK1 485 aa8.74□□□□□ -1.01
SSBP2-213ENST00000509743 TEKT3Q9BXF9 490 aa8.74□□□□□ -1.01
SSBP2-213ENST00000509743 RAVER2Q9HCJ3 691 aaKnown RBP8.74□□□□□ -1.01
SSBP2-213ENST00000509743 SCAF8Q9UPN6 1271 aaKnown RBP8.74□□□□□ -1.01
SSBP2-213ENST00000509743 ZHX2Q9Y6X8 837 aa8.74□□□□□ -1.01
SSBP2-213ENST00000509743 IPO5O00410 1097 aaKnown RBP8.73□□□□□ -1.01
SSBP2-213ENST00000509743 NFIBO00712 420 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 ATP2A1O14983 1001 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 MFAP3LO75121 409 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 TBCAO75347 108 aaKnown RBP8.73□□□□□ -1.01
SSBP2-213ENST00000509743 GAP43P17677 238 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 DNM2P50570 870 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 HIRAP54198 1017 aaPredicted RBP8.73□□□□□ -1.01
SSBP2-213ENST00000509743 UBXN1Q04323 297 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 EPHA7Q15375 998 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 PTPN14Q15678 1187 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 SH3D19Q5HYK7 790 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 FKBP15Q5T1M5 1219 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 E4F1Q66K89 784 aaPredicted RBP8.73□□□□□ -1.01
SSBP2-213ENST00000509743 ANKRD40Q6AI12 368 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 PPP4R3CPQ6ZMV5 832 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 NYAP1Q6ZVC0 841 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 OTOP1Q7RTM1 612 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 TMEM139Q8IV31 216 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 SULF1Q8IWU6 871 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 CPXCR1Q8N123 301 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 MB21D1Q8N884 522 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 RETREG2Q8NC44 543 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.73□□□□□ -1.01
SSBP2-213ENST00000509743 CYP2W1Q8TAV3 490 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 SYTL5Q8TDW5 730 aaPredicted RBP8.73□□□□□ -1.01
SSBP2-213ENST00000509743 ZKSCAN4Q969J2 545 aaPredicted RBP8.73□□□□□ -1.01
SSBP2-213ENST00000509743 C16orf45Q96MC5 204 aaPredicted RBP8.73□□□□□ -1.01
SSBP2-213ENST00000509743 HSD17B14Q9BPX1 270 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 TUBGCP2Q9BSJ2 902 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 VPS16Q9H269 839 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 SEMA6BQ9H3T3 888 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 KCND2Q9NZV8 630 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 RNF181Q9P0P0 153 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 ADAMTS5Q9UNA0 930 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 PAXBP1Q9Y5B6 917 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 UBIAD1Q9Y5Z9 338 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 MYH4Q9Y623 1939 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 SSC5DA1L4H1 1573 aa8.73□□□□□ -1.01
SSBP2-213ENST00000509743 COBLO75128 1261 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 GNA14O95837 355 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 GYPCP04921 128 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 TNNT1P13805 278 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 PRKCSHP14314 528 aaPredicted RBP8.72□□□□□ -1.01
SSBP2-213ENST00000509743 FECHP22830 423 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 DSG3P32926 999 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 MTIF2P46199 727 aaKnown RBP8.72□□□□□ -1.01
SSBP2-213ENST00000509743 HMGCS2P54868 508 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 UBXN2AP68543 259 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 MAP3K9P80192 1104 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 RBL2Q08999 1139 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 PABPC4Q13310 644 aaKnown RBP eCLIP8.72□□□□□ -1.01
SSBP2-213ENST00000509743 GIT2Q14161 759 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 COG2Q14746 738 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 ZCWPW2Q504Y3 356 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 HERC4Q5GLZ8 1057 aaPredicted RBP8.72□□□□□ -1.01
SSBP2-213ENST00000509743 MUM1L1Q5H9M0 696 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 B3GNT9Q6UX72 402 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 RNF207Q6ZRF8 634 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 REPS2Q8NFH8 660 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 ZNF507Q8TCN5 953 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 ATG4CQ96DT6 458 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 PPP1R13BQ96KQ4 1090 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 CEP63Q96MT8 703 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 TRERF1Q96PN7 1200 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 NACC1Q96RE7 527 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 NUP58Q9BVL2 599 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 JADE2Q9NQC1 790 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 RNF146Q9NTX7 359 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 TBC1D22BQ9NU19 505 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 HOXC10Q9NYD6 342 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 COL20A1Q9P218 1284 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 TCEAL9Q9UHQ7 104 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 COL4A3BPQ9Y5P4 624 aa8.72□□□□□ -1.01
SSBP2-213ENST00000509743 EML1O00423 815 aa8.71□□□□□ -1.02
SSBP2-213ENST00000509743 PES1O00541 588 aaKnown RBP8.71□□□□□ -1.02
SSBP2-213ENST00000509743 MAFGO15525 162 aa8.71□□□□□ -1.02
SSBP2-213ENST00000509743 CHMP2AO43633 222 aa8.71□□□□□ -1.02
SSBP2-213ENST00000509743 PPP1R12BO60237 982 aaPredicted RBP8.71□□□□□ -1.02
SSBP2-213ENST00000509743 USP2O75604 605 aaPredicted RBP8.71□□□□□ -1.02
SSBP2-213ENST00000509743 DDNO94850 711 aaPredicted RBP8.71□□□□□ -1.02
SSBP2-213ENST00000509743 ARP10275 920 aa8.71□□□□□ -1.02
SSBP2-213ENST00000509743 ITGB5P18084 799 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms