RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 H3BNC9 293 aa18.58■□□□□ 0.56
CXCL1-202ENST00000509101 H3BRB1 525 aa18.58■□□□□ 0.56
CXCL1-202ENST00000509101 TREHO43280 583 aa18.58■□□□□ 0.56
CXCL1-202ENST00000509101 LGALS2P05162 132 aa18.58■□□□□ 0.56
CXCL1-202ENST00000509101 SMIM10L2AP0DMW4 78 aa18.58■□□□□ 0.56
CXCL1-202ENST00000509101 SMIM10L2BP0DMW5 78 aa18.58■□□□□ 0.56
CXCL1-202ENST00000509101 ALADP13716 330 aa18.58■□□□□ 0.56
CXCL1-202ENST00000509101 CCND2P30279 289 aa18.58■□□□□ 0.56
CXCL1-202ENST00000509101 HOXC8P31273 242 aa18.58■□□□□ 0.56
CXCL1-202ENST00000509101 RRP1P56182 461 aaKnown RBP18.58■□□□□ 0.56
CXCL1-202ENST00000509101 HDAC1Q13547 482 aaPredicted RBP18.58■□□□□ 0.56
CXCL1-202ENST00000509101 CSPP1Q1MSJ5 1256 aa18.58■□□□□ 0.56
CXCL1-202ENST00000509101 PUS10Q3MIT2 529 aaKnown RBP18.58■□□□□ 0.56
CXCL1-202ENST00000509101 CWC27Q6UX04 472 aaKnown RBP18.58■□□□□ 0.56
CXCL1-202ENST00000509101 VSIG10LQ86VR7 867 aa18.58■□□□□ 0.56
CXCL1-202ENST00000509101 UBAC1Q9BSL1 405 aa18.58■□□□□ 0.56
CXCL1-202ENST00000509101 TUT1Q9H6E5 874 aaKnown RBP18.58■□□□□ 0.56
CXCL1-202ENST00000509101 KLRF2D3W0D1 207 aa18.57■□□□□ 0.56
CXCL1-202ENST00000509101 ZBTB5O15062 677 aa18.57■□□□□ 0.56
CXCL1-202ENST00000509101 IFIT1BQ5T764 474 aaKnown RBP18.57■□□□□ 0.56
CXCL1-202ENST00000509101 HOMER1Q86YM7 354 aa18.57■□□□□ 0.56
CXCL1-202ENST00000509101 TMEM192Q8IY95 271 aa18.57■□□□□ 0.56
CXCL1-202ENST00000509101 TOP1MTQ969P6 601 aa18.57■□□□□ 0.56
CXCL1-202ENST00000509101 PABPC5Q96DU9 382 aaKnown RBP18.57■□□□□ 0.56
CXCL1-202ENST00000509101 NSUN3Q9H649 340 aaKnown RBP18.57■□□□□ 0.56
CXCL1-202ENST00000509101 DIAPH3Q9NSV4 1193 aa18.57■□□□□ 0.56
CXCL1-202ENST00000509101 PCDHA1Q9Y5I3 950 aa18.57■□□□□ 0.56
CXCL1-202ENST00000509101 KIAA1671Q9BY89 1806 aa18.57■□□□□ 0.56
CXCL1-202ENST00000509101 WDFY4Q6ZS81 3184 aa18.56■□□□□ 0.56
CXCL1-202ENST00000509101 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.56■□□□□ 0.56
CXCL1-202ENST00000509101 DCXO43602 365 aa18.56■□□□□ 0.56
CXCL1-202ENST00000509101 IMMTQ16891 758 aaKnown RBP18.56■□□□□ 0.56
CXCL1-202ENST00000509101 FCHSD1Q86WN1 690 aa18.56■□□□□ 0.56
CXCL1-202ENST00000509101 MTMR8Q96EF0 704 aa18.56■□□□□ 0.56
CXCL1-202ENST00000509101 IFIH1Q9BYX4 1025 aaKnown RBP18.56■□□□□ 0.56
CXCL1-202ENST00000509101 KRT23Q9C075 422 aa18.56■□□□□ 0.56
CXCL1-202ENST00000509101 RNPEPQ9H4A4 650 aa18.56■□□□□ 0.56
CXCL1-202ENST00000509101 BCAS3Q9H6U6 928 aa18.56■□□□□ 0.56
CXCL1-202ENST00000509101 MAP3K20Q9NYL2 800 aaKnown RBP18.56■□□□□ 0.56
CXCL1-202ENST00000509101 MAD2L2Q9UI95 211 aa18.56■□□□□ 0.56
CXCL1-202ENST00000509101 NOP56O00567 594 aaKnown RBP18.55■□□□□ 0.56
CXCL1-202ENST00000509101 CAND2O75155 1236 aa18.55■□□□□ 0.56
CXCL1-202ENST00000509101 TGFB3P10600 412 aa18.55■□□□□ 0.56
CXCL1-202ENST00000509101 ZP2Q05996 745 aa18.55■□□□□ 0.56
CXCL1-202ENST00000509101 CLDND1Q9NY35 253 aa18.55■□□□□ 0.56
CXCL1-202ENST00000509101 ZNF318Q5VUA4 2279 aa18.54■□□□□ 0.56
CXCL1-202ENST00000509101 GCOM1H8Y6P7 765 aaPredicted RBP18.54■□□□□ 0.56
CXCL1-202ENST00000509101 POLR2MP0CAP2 368 aa18.54■□□□□ 0.56
CXCL1-202ENST00000509101 CTNNB1P35222 781 aa18.54■□□□□ 0.56
CXCL1-202ENST00000509101 B4GALNT3Q6L9W6 998 aa18.54■□□□□ 0.56
CXCL1-202ENST00000509101 RPAINQ86UA6 219 aa18.54■□□□□ 0.56
CXCL1-202ENST00000509101 TRIM50Q86XT4 487 aa18.54■□□□□ 0.56
CXCL1-202ENST00000509101 DSCC1Q9BVC3 393 aa18.54■□□□□ 0.56
CXCL1-202ENST00000509101 CNNM2Q9H8M5 875 aa18.54■□□□□ 0.56
CXCL1-202ENST00000509101 SETD4Q9NVD3 440 aa18.54■□□□□ 0.56
CXCL1-202ENST00000509101 FAM50BQ9Y247 325 aa18.54■□□□□ 0.56
CXCL1-202ENST00000509101 TRIOO75962 3097 aa18.54■□□□□ 0.56
CXCL1-202ENST00000509101 COL19A1Q14993 1142 aa18.53■□□□□ 0.56
CXCL1-202ENST00000509101 SEC23AQ15436 765 aa18.53■□□□□ 0.56
CXCL1-202ENST00000509101 SLC35G1Q2M3R5 365 aa18.53■□□□□ 0.56
CXCL1-202ENST00000509101 GNPTABQ3T906 1256 aa18.53■□□□□ 0.56
CXCL1-202ENST00000509101 SAMD3Q8N6K7 520 aa18.53■□□□□ 0.56
CXCL1-202ENST00000509101 APBB2Q92870 758 aa18.53■□□□□ 0.56
CXCL1-202ENST00000509101 PIGSQ96S52 555 aa18.53■□□□□ 0.56
CXCL1-202ENST00000509101 PALM3A6NDB9 673 aaPredicted RBP18.52■□□□□ 0.56
CXCL1-202ENST00000509101 CSPG5O95196 566 aa18.52■□□□□ 0.56
CXCL1-202ENST00000509101 GNAT1P11488 350 aa18.52■□□□□ 0.56
CXCL1-202ENST00000509101 ARHGAP4P98171 946 aa18.52■□□□□ 0.56
CXCL1-202ENST00000509101 CLUL1Q15846 466 aa18.52■□□□□ 0.56
CXCL1-202ENST00000509101 METTL7BQ6UX53 244 aa18.52■□□□□ 0.56
CXCL1-202ENST00000509101 CYB5R4Q7L1T6 521 aa18.52■□□□□ 0.56
CXCL1-202ENST00000509101 CYFIP1Q7L576 1253 aa18.52■□□□□ 0.56
CXCL1-202ENST00000509101 FIBCD1Q8N539 461 aa18.52■□□□□ 0.56
CXCL1-202ENST00000509101 USP26Q9BXU7 913 aa18.52■□□□□ 0.56
CXCL1-202ENST00000509101 PRKAG3Q9UGI9 489 aa18.52■□□□□ 0.56
CXCL1-202ENST00000509101 LOXHD1Q8IVV2 1947 aa18.52■□□□□ 0.56
CXCL1-202ENST00000509101 FRMPD4Q14CM0 1322 aa18.51■□□□□ 0.55
CXCL1-202ENST00000509101 POTEB3A0JP26 581 aa18.51■□□□□ 0.55
CXCL1-202ENST00000509101 MRE11P49959 708 aa18.51■□□□□ 0.55
CXCL1-202ENST00000509101 MRPS9P82933 396 aaKnown RBP18.51■□□□□ 0.55
CXCL1-202ENST00000509101 SP4Q02446 784 aa18.51■□□□□ 0.55
CXCL1-202ENST00000509101 SEMA3FQ13275 785 aa18.51■□□□□ 0.55
CXCL1-202ENST00000509101 UTP14CQ5TAP6 766 aaKnown RBP18.51■□□□□ 0.55
CXCL1-202ENST00000509101 POTEBQ6S5H4 581 aa18.51■□□□□ 0.55
CXCL1-202ENST00000509101 PLEKHM2Q8IWE5 1019 aa18.51■□□□□ 0.55
CXCL1-202ENST00000509101 ADHFE1Q8IWW8 467 aa18.51■□□□□ 0.55
CXCL1-202ENST00000509101 LMBR1Q8WVP7 490 aa18.51■□□□□ 0.55
CXCL1-202ENST00000509101 IL17RAQ96F46 866 aa18.51■□□□□ 0.55
CXCL1-202ENST00000509101 GPR20Q99678 358 aa18.51■□□□□ 0.55
CXCL1-202ENST00000509101 ZNF215Q9UL58 517 aaPredicted RBP18.51■□□□□ 0.55
CXCL1-202ENST00000509101 TELO2Q9Y4R8 837 aa18.51■□□□□ 0.55
CXCL1-202ENST00000509101 SUPT16HQ9Y5B9 1047 aaKnown RBP18.51■□□□□ 0.55
CXCL1-202ENST00000509101 ADGRA3Q8IWK6 1321 aa18.5■□□□□ 0.55
CXCL1-202ENST00000509101 C19orf67A6NJJ6 358 aa18.5■□□□□ 0.55
CXCL1-202ENST00000509101 HIP1O00291 1037 aa18.5■□□□□ 0.55
CXCL1-202ENST00000509101 ICAM3P32942 547 aa18.5■□□□□ 0.55
CXCL1-202ENST00000509101 LTBRP36941 435 aa18.5■□□□□ 0.55
CXCL1-202ENST00000509101 NHLH1Q02575 133 aa18.5■□□□□ 0.55
CXCL1-202ENST00000509101 TRAF1Q13077 416 aa18.5■□□□□ 0.55
CXCL1-202ENST00000509101 NEDD9Q14511 834 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms