RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-210ENST00000507965 SSH3Q8TE77 659 aa6.75□□□□□ -1.33
ATXN3-210ENST00000507965 SOCS4Q8WXH5 440 aa6.75□□□□□ -1.33
ATXN3-210ENST00000507965 USP6NLQ92738 828 aa6.75□□□□□ -1.33
ATXN3-210ENST00000507965 APBA2Q99767 749 aa6.75□□□□□ -1.33
ATXN3-210ENST00000507965 CCDC8Q9H0W5 538 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-210ENST00000507965 C7orf69Q9H7B7 122 aa6.75□□□□□ -1.33
ATXN3-210ENST00000507965 GPR108Q9NPR9 543 aa6.75□□□□□ -1.33
ATXN3-210ENST00000507965 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.75□□□□□ -1.33
ATXN3-210ENST00000507965 MAFBQ9Y5Q3 323 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-210ENST00000507965 GBF1Q92538 1859 aa6.75□□□□□ -1.33
ATXN3-210ENST00000507965 C19orf81C9J6K1 198 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 LINC01387J3KSC0 135 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 IPO8O15397 1037 aaKnown RBP6.74□□□□□ -1.33
ATXN3-210ENST00000507965 HLA-DOAP06340 250 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 VCAM1P19320 739 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 MAPK4P31152 587 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 CD68P34810 354 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-210ENST00000507965 BMP8BP34820 402 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 RGS2P41220 211 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 PDE4CQ08493 712 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 PTK7Q13308 1070 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 PDE3AQ14432 1141 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 RAB3GAP1Q15042 981 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 CRTC2Q53ET0 693 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-210ENST00000507965 CCDC158Q5M9N0 1113 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 WDR78Q5VTH9 848 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 ZKSCAN2Q63HK3 967 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 RNF43Q68DV7 783 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 PLEKHH3Q7Z736 793 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 DTX1Q86Y01 620 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 TREML1Q86YW5 311 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 TRIM42Q8IWZ5 723 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 TDHQ8IZJ6 230 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 MAGEB6Q8N7X4 407 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 GALNT11Q8NCW6 608 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 SLC17A8Q8NDX2 589 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 ACER1Q8TDN7 264 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 EAF2Q96CJ1 260 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-210ENST00000507965 MYO19Q96H55 970 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 C12orf42Q96LP6 360 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 FEZ1Q99689 392 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 BTBD7Q9P203 1132 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 EXOC6BQ9Y2D4 811 aa6.74□□□□□ -1.33
ATXN3-210ENST00000507965 HMX2A2RU54 273 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 CCER2I3L3R5 266 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 WISP1O95388 367 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 XRCC5P13010 732 aaKnown RBP6.73□□□□□ -1.33
ATXN3-210ENST00000507965 HOXD8P13378 290 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-210ENST00000507965 GUCY1A2P33402 732 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 SHMT1P34896 483 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 USP5P45974 858 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 PLCD1P51178 756 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 ATP8B2P98198 1209 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 TATDN1Q6P1N9 297 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 CLEC10AQ8IUN9 316 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 ANKMY2Q8IV38 441 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 FOXP4Q8IVH2 680 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-210ENST00000507965 ITPRIPQ8IWB1 547 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 DEFB123Q8N688 67 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 TRPV1Q8NER1 839 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 NPLOC4Q8TAT6 608 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 ZNF512BQ96KM6 892 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-210ENST00000507965 KRTAP4-7Q9BYR0 210 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 PPP1R12CQ9BZL4 782 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 SERPINB13Q9UIV8 391 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 USTQ9Y2C2 406 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 MCM3APO60318 1980 aa6.73□□□□□ -1.33
ATXN3-210ENST00000507965 A0A1W2PRG0 241 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 PRR19A6NJB7 356 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 SMIM22K7EJ46 135 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 CYP2D6P10635 497 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 CAPN2P17655 700 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 CYP2C19P33261 490 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 SEPT2Q15019 361 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 ABCB5Q2M3G0 1257 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 LRIT3Q3SXY7 679 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 KIAA1755Q5JYT7 1200 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 CEP85Q6P2H3 762 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 TXNDC11Q6PKC3 985 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 AACSQ86V21 672 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 CCAR1Q8IX12 1150 aaKnown RBP6.72□□□□□ -1.33
ATXN3-210ENST00000507965 FTSJ3Q8IY81 847 aaKnown RBP6.72□□□□□ -1.33
ATXN3-210ENST00000507965 SLC44A5Q8NCS7 719 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 RIOK1Q9BRS2 568 aaKnown RBP6.72□□□□□ -1.33
ATXN3-210ENST00000507965 KIAA1683Q9H0B3 1180 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 EHD4Q9H223 541 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 RPAP3Q9H6T3 665 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-210ENST00000507965 CWC22Q9HCG8 908 aaKnown RBP6.72□□□□□ -1.33
ATXN3-210ENST00000507965 IL1RAPL2Q9NP60 686 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 GINM1Q9NU53 330 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 MTMR10Q9NXD2 777 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 NOP58Q9Y2X3 529 aaKnown RBP6.72□□□□□ -1.33
ATXN3-210ENST00000507965 RABGAP1Q9Y3P9 1069 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 KCNMB2Q9Y691 235 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 LCTP09848 1927 aa6.72□□□□□ -1.33
ATXN3-210ENST00000507965 SLC15A5A6NIM6 579 aa6.71□□□□□ -1.34
ATXN3-210ENST00000507965 USP17L15C9J2P7 530 aa6.71□□□□□ -1.34
ATXN3-210ENST00000507965 USP17L13C9JLJ4 530 aa6.71□□□□□ -1.34
ATXN3-210ENST00000507965 USP17L12C9JPN9 530 aa6.71□□□□□ -1.34
ATXN3-210ENST00000507965 USP17L11C9JVI0 530 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms