RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 RNF208Q9H0X6 261 aa15.27■□□□□ 0.04
UBE2D3-221ENST00000507845 AGO4Q9HCK5 861 aaKnown RBP15.27■□□□□ 0.04
UBE2D3-221ENST00000507845 NKRFO15226 690 aaKnown RBP eCLIP15.26■□□□□ 0.03
UBE2D3-221ENST00000507845 MSH4O15457 936 aa15.26■□□□□ 0.03
UBE2D3-221ENST00000507845 MSCO60682 206 aa15.26■□□□□ 0.03
UBE2D3-221ENST00000507845 DUSP11O75319 330 aaKnown RBP15.26■□□□□ 0.03
UBE2D3-221ENST00000507845 RARBP10826 455 aa15.26■□□□□ 0.03
UBE2D3-221ENST00000507845 ARHGAP1Q07960 439 aa15.26■□□□□ 0.03
UBE2D3-221ENST00000507845 ITGB3BPQ13352 177 aaPredicted RBP15.26■□□□□ 0.03
UBE2D3-221ENST00000507845 ORC2Q13416 577 aaPredicted RBP15.26■□□□□ 0.03
UBE2D3-221ENST00000507845 ZNF174Q15697 407 aa15.26■□□□□ 0.03
UBE2D3-221ENST00000507845 FAM173BQ6P4H8 233 aa15.26■□□□□ 0.03
UBE2D3-221ENST00000507845 ETNPPLQ8TBG4 499 aa15.26■□□□□ 0.03
UBE2D3-221ENST00000507845 UIMC1Q96RL1 719 aa15.26■□□□□ 0.03
UBE2D3-221ENST00000507845 SENP7Q9BQF6 1050 aa15.26■□□□□ 0.03
UBE2D3-221ENST00000507845 BCAS3Q9H6U6 928 aa15.26■□□□□ 0.03
UBE2D3-221ENST00000507845 PKD2L1Q9P0L9 805 aa15.26■□□□□ 0.03
UBE2D3-221ENST00000507845 PCDHB6Q9Y5E3 794 aa15.26■□□□□ 0.03
UBE2D3-221ENST00000507845 POTEFA5A3E0 1075 aa15.25■□□□□ 0.03
UBE2D3-221ENST00000507845 IPO5O00410 1097 aaKnown RBP15.25■□□□□ 0.03
UBE2D3-221ENST00000507845 NEMFO60524 1076 aa15.25■□□□□ 0.03
UBE2D3-221ENST00000507845 GGPS1O95749 300 aa15.25■□□□□ 0.03
UBE2D3-221ENST00000507845 GH1P01241 217 aa15.25■□□□□ 0.03
UBE2D3-221ENST00000507845 MCM7P33993 719 aa15.25■□□□□ 0.03
UBE2D3-221ENST00000507845 NEDD9Q14511 834 aa15.25■□□□□ 0.03
UBE2D3-221ENST00000507845 CELF3Q5SZQ8 465 aaKnown RBP15.25■□□□□ 0.03
UBE2D3-221ENST00000507845 TLK2Q86UE8 772 aa15.25■□□□□ 0.03
UBE2D3-221ENST00000507845 SLC5A5Q92911 643 aa15.25■□□□□ 0.03
UBE2D3-221ENST00000507845 DEFB118Q96PH6 123 aa15.25■□□□□ 0.03
UBE2D3-221ENST00000507845 ZNF577Q9BSK1 485 aa15.25■□□□□ 0.03
UBE2D3-221ENST00000507845 UPF3AQ9H1J1 476 aaKnown RBP15.25■□□□□ 0.03
UBE2D3-221ENST00000507845 KCNMB3Q9NPA1 279 aa15.25■□□□□ 0.03
UBE2D3-221ENST00000507845 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.25■□□□□ 0.03
UBE2D3-221ENST00000507845 Q9Y3F1 56 aa15.25■□□□□ 0.03
UBE2D3-221ENST00000507845 NFASCO94856 1347 aa15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 SYNRGQ9UMZ2 1314 aa15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 DHX15O43143 795 aaKnown RBP15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 DYNC1LI2O43237 492 aaPredicted RBP15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 SORBS3O60504 671 aa15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 FARP2O94887 1054 aaPredicted RBP15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 GJB1P08034 283 aa15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 GJA9P57773 515 aa15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 NKX3-2P78367 333 aa15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 NUCB2P80303 420 aa15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 DHX37Q8IY37 1157 aaKnown RBP15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 GIMAP8Q8ND71 665 aaPredicted RBP15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 OR6J1Q8NGC5 347 aa15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 HAS1Q92839 578 aa15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 GJA10Q969M2 543 aa15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 EMID1Q96A84 441 aaPredicted RBP15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 TMEM60Q9H2L4 133 aa15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 XPNPEP3Q9NQH7 507 aa15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 CIZ1Q9ULV3 898 aaPredicted RBP15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 MYH9P35579 1960 aaKnown RBP15.24■□□□□ 0.03
UBE2D3-221ENST00000507845 TBX3O15119 743 aa15.23■□□□□ 0.03
UBE2D3-221ENST00000507845 CTAGE5O15320 804 aa15.23■□□□□ 0.03
UBE2D3-221ENST00000507845 ADAMTS4O75173 837 aa15.23■□□□□ 0.03
UBE2D3-221ENST00000507845 PGK1P00558 417 aa15.23■□□□□ 0.03
UBE2D3-221ENST00000507845 IRX5P78411 483 aaPredicted RBP15.23■□□□□ 0.03
UBE2D3-221ENST00000507845 LAMC2Q13753 1193 aa15.23■□□□□ 0.03
UBE2D3-221ENST00000507845 CALCRLQ16602 461 aa15.23■□□□□ 0.03
UBE2D3-221ENST00000507845 METTL7BQ6UX53 244 aa15.23■□□□□ 0.03
UBE2D3-221ENST00000507845 CYFIP1Q7L576 1253 aa15.23■□□□□ 0.03
UBE2D3-221ENST00000507845 C4orf32Q8N8J7 132 aa15.23■□□□□ 0.03
UBE2D3-221ENST00000507845 FAM20AQ96MK3 541 aa15.23■□□□□ 0.03
UBE2D3-221ENST00000507845 MTMR9Q96QG7 549 aa15.23■□□□□ 0.03
UBE2D3-221ENST00000507845 RIT2Q99578 217 aa15.23■□□□□ 0.03
UBE2D3-221ENST00000507845 SDF4Q9BRK5 362 aa15.23■□□□□ 0.03
UBE2D3-221ENST00000507845 CRISPLD2Q9H0B8 497 aa15.23■□□□□ 0.03
UBE2D3-221ENST00000507845 AP5M1Q9H0R1 490 aa15.23■□□□□ 0.03
UBE2D3-221ENST00000507845 TBC1D22BQ9NU19 505 aa15.23■□□□□ 0.03
UBE2D3-221ENST00000507845 TRPC6Q9Y210 931 aa15.23■□□□□ 0.03
UBE2D3-221ENST00000507845 MYADML2A6NDP7 307 aa15.22■□□□□ 0.03
UBE2D3-221ENST00000507845 PSMD10O75832 226 aa15.22■□□□□ 0.03
UBE2D3-221ENST00000507845 SGPL1O95470 568 aa15.22■□□□□ 0.03
UBE2D3-221ENST00000507845 PTGDRQ13258 359 aa15.22■□□□□ 0.03
UBE2D3-221ENST00000507845 LRCH2Q5VUJ6 765 aa15.22■□□□□ 0.03
UBE2D3-221ENST00000507845 U2AF1L4Q8WU68 220 aaKnown RBP15.22■□□□□ 0.03
UBE2D3-221ENST00000507845 AFG1LQ8WV93 481 aa15.22■□□□□ 0.03
UBE2D3-221ENST00000507845 ABHD8Q96I13 439 aa15.22■□□□□ 0.03
UBE2D3-221ENST00000507845 FTOQ9C0B1 505 aaKnown RBP eCLIP15.22■□□□□ 0.03
UBE2D3-221ENST00000507845 MLXIPQ9HAP2 919 aa15.22■□□□□ 0.03
UBE2D3-221ENST00000507845 JPH1Q9HDC5 661 aaPredicted RBP15.22■□□□□ 0.03
UBE2D3-221ENST00000507845 OGDHLQ9ULD0 1010 aa15.22■□□□□ 0.03
UBE2D3-221ENST00000507845 TELO2Q9Y4R8 837 aa15.22■□□□□ 0.03
UBE2D3-221ENST00000507845 BRCA2P51587 3418 aa15.21■□□□□ 0.03
UBE2D3-221ENST00000507845 A6NJR5 290 aa15.21■□□□□ 0.03
UBE2D3-221ENST00000507845 DDX39AO00148 427 aaKnown RBP15.21■□□□□ 0.03
UBE2D3-221ENST00000507845 GAS7O60861 476 aa15.21■□□□□ 0.03
UBE2D3-221ENST00000507845 BAG4O95429 457 aaKnown RBP15.21■□□□□ 0.03
UBE2D3-221ENST00000507845 OR52Z1P0C646 297 aa15.21■□□□□ 0.03
UBE2D3-221ENST00000507845 C6orf222P0C671 652 aaPredicted RBP15.21■□□□□ 0.03
UBE2D3-221ENST00000507845 PYGBP11216 843 aa15.21■□□□□ 0.03
UBE2D3-221ENST00000507845 CST5P28325 142 aaPredicted RBP15.21■□□□□ 0.03
UBE2D3-221ENST00000507845 GJA8P48165 433 aa15.21■□□□□ 0.03
UBE2D3-221ENST00000507845 ATP2C1P98194 919 aaPredicted RBP15.21■□□□□ 0.03
UBE2D3-221ENST00000507845 BEX3Q00994 111 aa15.21■□□□□ 0.03
UBE2D3-221ENST00000507845 LRRC41Q15345 812 aa15.21■□□□□ 0.03
UBE2D3-221ENST00000507845 SF3A1Q15459 793 aaKnown RBP15.21■□□□□ 0.03
UBE2D3-221ENST00000507845 FSCN1Q16658 493 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms