RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 TFRCP02786 760 aaKnown RBP22.68■■□□□ 1.22
USP53-203ENST00000507597 SEMA3FQ13275 785 aa22.68■■□□□ 1.22
USP53-203ENST00000507597 CYFIP1Q7L576 1253 aa22.68■■□□□ 1.22
USP53-203ENST00000507597 SLC5A5Q92911 643 aa22.68■■□□□ 1.22
USP53-203ENST00000507597 LENG9Q96B70 501 aa22.68■■□□□ 1.22
USP53-203ENST00000507597 SPATA33Q96N06 139 aa22.68■■□□□ 1.22
USP53-203ENST00000507597 JPH1Q9HDC5 661 aaPredicted RBP22.68■■□□□ 1.22
USP53-203ENST00000507597 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.68■■□□□ 1.22
USP53-203ENST00000507597 PCDHA12Q9UN75 941 aa22.68■■□□□ 1.22
USP53-203ENST00000507597 STK24Q9Y6E0 443 aa22.68■■□□□ 1.22
USP53-203ENST00000507597 MCM3APO60318 1980 aa22.67■■□□□ 1.22
USP53-203ENST00000507597 SLC37A4O43826 429 aa22.67■■□□□ 1.22
USP53-203ENST00000507597 OR52Z1P0C646 297 aa22.67■■□□□ 1.22
USP53-203ENST00000507597 C6orf222P0C671 652 aaPredicted RBP22.67■■□□□ 1.22
USP53-203ENST00000507597 SFNP31947 248 aa22.67■■□□□ 1.22
USP53-203ENST00000507597 TOB1P50616 345 aaPredicted RBP22.67■■□□□ 1.22
USP53-203ENST00000507597 ZNF746Q6NUN9 644 aaPredicted RBP22.67■■□□□ 1.22
USP53-203ENST00000507597 POTEDQ86YR6 584 aa22.67■■□□□ 1.22
USP53-203ENST00000507597 PPTC7Q8NI37 304 aa22.67■■□□□ 1.22
USP53-203ENST00000507597 UPF3AQ9H1J1 476 aaKnown RBP22.67■■□□□ 1.22
USP53-203ENST00000507597 KCNMB3Q9NPA1 279 aa22.67■■□□□ 1.22
USP53-203ENST00000507597 PKD2L1Q9P0L9 805 aa22.67■■□□□ 1.22
USP53-203ENST00000507597 PCDHB6Q9Y5E3 794 aa22.67■■□□□ 1.22
USP53-203ENST00000507597 KIAA1217Q5T5P2 1943 aa22.67■■□□□ 1.22
USP53-203ENST00000507597 KBTBD13C9JR72 458 aa22.66■■□□□ 1.22
USP53-203ENST00000507597 ATP9AO75110 1047 aa22.66■■□□□ 1.22
USP53-203ENST00000507597 PPFIA4O75335 1185 aa22.66■■□□□ 1.22
USP53-203ENST00000507597 DDIT3P35638 169 aa22.66■■□□□ 1.22
USP53-203ENST00000507597 PRPHP41219 470 aa22.66■■□□□ 1.22
USP53-203ENST00000507597 NKX3-2P78367 333 aa22.66■■□□□ 1.22
USP53-203ENST00000507597 SP2Q02086 613 aa22.66■■□□□ 1.22
USP53-203ENST00000507597 PTGDRQ13258 359 aa22.66■■□□□ 1.22
USP53-203ENST00000507597 DGKDQ16760 1214 aa22.66■■□□□ 1.22
USP53-203ENST00000507597 GNASQ5JWF2 1037 aa22.66■■□□□ 1.22
USP53-203ENST00000507597 ANO1Q5XXA6 986 aa22.66■■□□□ 1.22
USP53-203ENST00000507597 ARL6IP4Q66PJ3 421 aaKnown RBP22.66■■□□□ 1.22
USP53-203ENST00000507597 LHX8Q68G74 356 aa22.66■■□□□ 1.22
USP53-203ENST00000507597 SMAP1Q8IYB5 467 aaPredicted RBP22.66■■□□□ 1.22
USP53-203ENST00000507597 RDM1Q8NG50 284 aa22.66■■□□□ 1.22
USP53-203ENST00000507597 ETNPPLQ8TBG4 499 aa22.66■■□□□ 1.22
USP53-203ENST00000507597 U2AF1L4Q8WU68 220 aaKnown RBP22.66■■□□□ 1.22
USP53-203ENST00000507597 SEPT1Q8WYJ6 367 aa22.66■■□□□ 1.22
USP53-203ENST00000507597 TSEN34Q9BSV6 310 aaKnown RBP22.66■■□□□ 1.22
USP53-203ENST00000507597 POLR3EQ9NVU0 708 aa22.66■■□□□ 1.22
USP53-203ENST00000507597 LRRC37A2A6NM11 1700 aa22.65■■□□□ 1.22
USP53-203ENST00000507597 FARP2O94887 1054 aaPredicted RBP22.65■■□□□ 1.22
USP53-203ENST00000507597 GJA8P48165 433 aa22.65■■□□□ 1.22
USP53-203ENST00000507597 JAK3P52333 1124 aa22.65■■□□□ 1.22
USP53-203ENST00000507597 ARHGAP1Q07960 439 aa22.65■■□□□ 1.22
USP53-203ENST00000507597 PKP1Q13835 747 aa22.65■■□□□ 1.22
USP53-203ENST00000507597 SF3A1Q15459 793 aaKnown RBP22.65■■□□□ 1.22
USP53-203ENST00000507597 FSCN1Q16658 493 aaKnown RBP22.65■■□□□ 1.22
USP53-203ENST00000507597 DTHD1Q6ZMT9 781 aa22.65■■□□□ 1.22
USP53-203ENST00000507597 ANKLE1Q8NAG6 615 aa22.65■■□□□ 1.22
USP53-203ENST00000507597 OGDHLQ9ULD0 1010 aa22.65■■□□□ 1.22
USP53-203ENST00000507597 SYNRGQ9UMZ2 1314 aa22.64■■□□□ 1.22
USP53-203ENST00000507597 A6NJR5 290 aa22.64■■□□□ 1.21
USP53-203ENST00000507597 CABYRO75952 493 aa22.64■■□□□ 1.21
USP53-203ENST00000507597 CST5P28325 142 aaPredicted RBP22.64■■□□□ 1.21
USP53-203ENST00000507597 TXKP42681 527 aa22.64■■□□□ 1.21
USP53-203ENST00000507597 KRT85P78386 507 aa22.64■■□□□ 1.21
USP53-203ENST00000507597 MIS18BP1Q6P0N0 1132 aa22.64■■□□□ 1.21
USP53-203ENST00000507597 COPS5Q92905 334 aa22.64■■□□□ 1.21
USP53-203ENST00000507597 TNPO1Q92973 898 aaKnown RBP22.64■■□□□ 1.21
USP53-203ENST00000507597 MTMR9Q96QG7 549 aa22.64■■□□□ 1.21
USP53-203ENST00000507597 SAMM50Q9Y512 469 aa22.64■■□□□ 1.21
USP53-203ENST00000507597 ELP1O95163 1332 aa22.63■■□□□ 1.21
USP53-203ENST00000507597 MOXD2PA6NHM9 499 aa22.63■■□□□ 1.21
USP53-203ENST00000507597 WDR64B1ANS9 1081 aa22.63■■□□□ 1.21
USP53-203ENST00000507597 DKC1O60832 514 aaKnown RBP eCLIP22.63■■□□□ 1.21
USP53-203ENST00000507597 PSMD10O75832 226 aa22.63■■□□□ 1.21
USP53-203ENST00000507597 PGK1P00558 417 aa22.63■■□□□ 1.21
USP53-203ENST00000507597 MYCNP04198 464 aaPredicted RBP22.63■■□□□ 1.21
USP53-203ENST00000507597 ATP2C1P98194 919 aaPredicted RBP22.63■■□□□ 1.21
USP53-203ENST00000507597 ITGB3BPQ13352 177 aaPredicted RBP22.63■■□□□ 1.21
USP53-203ENST00000507597 STK38Q15208 465 aa22.63■■□□□ 1.21
USP53-203ENST00000507597 AFG1LQ8WV93 481 aa22.63■■□□□ 1.21
USP53-203ENST00000507597 CRISPLD2Q9H0B8 497 aa22.63■■□□□ 1.21
USP53-203ENST00000507597 AZI2Q9H6S1 392 aa22.63■■□□□ 1.21
USP53-203ENST00000507597 TTC12Q9H892 705 aaPredicted RBP22.63■■□□□ 1.21
USP53-203ENST00000507597 DDX39AO00148 427 aaKnown RBP22.62■■□□□ 1.21
USP53-203ENST00000507597 DNM1LO00429 736 aa22.62■■□□□ 1.21
USP53-203ENST00000507597 ADAMTS4O75173 837 aa22.62■■□□□ 1.21
USP53-203ENST00000507597 YEATS4O95619 227 aa22.62■■□□□ 1.21
USP53-203ENST00000507597 PSAPP07602 524 aa22.62■■□□□ 1.21
USP53-203ENST00000507597 PPP2R5CQ13362 524 aa22.62■■□□□ 1.21
USP53-203ENST00000507597 NBR1Q14596 966 aa22.62■■□□□ 1.21
USP53-203ENST00000507597 GJC2Q5T442 439 aaPredicted RBP22.62■■□□□ 1.21
USP53-203ENST00000507597 FAM160B1Q5W0V3 765 aa22.62■■□□□ 1.21
USP53-203ENST00000507597 MIER3Q7Z3K6 550 aa22.62■■□□□ 1.21
USP53-203ENST00000507597 KLHDC9Q8NEP7 349 aa22.62■■□□□ 1.21
USP53-203ENST00000507597 ERMNQ8TAM6 284 aa22.62■■□□□ 1.21
USP53-203ENST00000507597 HAS1Q92839 578 aa22.62■■□□□ 1.21
USP53-203ENST00000507597 FERMT2Q96AC1 680 aa22.62■■□□□ 1.21
USP53-203ENST00000507597 ABHD8Q96I13 439 aa22.62■■□□□ 1.21
USP53-203ENST00000507597 KATNAL1Q9BW62 490 aa22.62■■□□□ 1.21
USP53-203ENST00000507597 PCDHA10Q9Y5I2 948 aa22.62■■□□□ 1.21
USP53-203ENST00000507597 MORC2Q9Y6X9 1032 aaPredicted RBP22.62■■□□□ 1.21
USP53-203ENST00000507597 DHX15O43143 795 aaKnown RBP22.61■■□□□ 1.21
USP53-203ENST00000507597 ADCY6O43306 1168 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms