RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 SPIRE1Q08AE8 756 aa16.02■□□□□ 0.16
RNF4-208ENST00000507247 LY6KQ17RY6 165 aa16.02■□□□□ 0.16
RNF4-208ENST00000507247 LRCH2Q5VUJ6 765 aa16.02■□□□□ 0.16
RNF4-208ENST00000507247 MFSD14CQ5VZR4 134 aa16.02■□□□□ 0.16
RNF4-208ENST00000507247 KRI1Q8N9T8 703 aaKnown RBP16.02■□□□□ 0.16
RNF4-208ENST00000507247 PXYLP1Q8TE99 480 aa16.02■□□□□ 0.16
RNF4-208ENST00000507247 FERMT2Q96AC1 680 aa16.02■□□□□ 0.16
RNF4-208ENST00000507247 DDX41Q9UJV9 622 aaKnown RBP16.02■□□□□ 0.16
RNF4-208ENST00000507247 VAV3Q9UKW4 847 aa16.02■□□□□ 0.16
RNF4-208ENST00000507247 NFASCO94856 1347 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 POTEMA6NI47 508 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 DDX39AO00148 427 aaKnown RBP16.01■□□□□ 0.15
RNF4-208ENST00000507247 SORBS3O60504 671 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 GAS7O60861 476 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 CUTAO60888 179 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 TGFB3P10600 412 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 FXR2P51116 673 aaKnown RBP eCLIP16.01■□□□□ 0.15
RNF4-208ENST00000507247 CACNB2Q08289 660 aaPredicted RBP16.01■□□□□ 0.15
RNF4-208ENST00000507247 TTLL4Q14679 1199 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 CCDC144BQ3MJ40 725 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 SPECC1Q5M775 1068 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 GJC2Q5T442 439 aaPredicted RBP16.01■□□□□ 0.15
RNF4-208ENST00000507247 B3GNT9Q6UX72 402 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 DTHD1Q6ZMT9 781 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 SCFD2Q8WU76 684 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 COPS5Q92905 334 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 RIT2Q99578 217 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 SENP7Q9BQF6 1050 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 TEKT3Q9BXF9 490 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 CSRNP2Q9H175 543 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 PCDHA12Q9UN75 941 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 PTPN22Q9Y2R2 807 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 TELO2Q9Y4R8 837 aa16.01■□□□□ 0.15
RNF4-208ENST00000507247 GADD45BO75293 160 aaPredicted RBP16■□□□□ 0.15
RNF4-208ENST00000507247 PRPF40AO75400 957 aaKnown RBP16■□□□□ 0.15
RNF4-208ENST00000507247 HMGCRP04035 888 aa16■□□□□ 0.15
RNF4-208ENST00000507247 TXNP10599 105 aaKnown RBP16■□□□□ 0.15
RNF4-208ENST00000507247 SMPD1P17405 629 aa16■□□□□ 0.15
RNF4-208ENST00000507247 PPP2R5CQ13362 524 aa16■□□□□ 0.15
RNF4-208ENST00000507247 CSPP1Q1MSJ5 1256 aa16■□□□□ 0.15
RNF4-208ENST00000507247 TMEM266Q2M3C6 531 aa16■□□□□ 0.15
RNF4-208ENST00000507247 TPRNQ4KMQ1 711 aa16■□□□□ 0.15
RNF4-208ENST00000507247 KCNV1Q6PIU1 500 aa16■□□□□ 0.15
RNF4-208ENST00000507247 IGSF22Q8N9C0 903 aa16■□□□□ 0.15
RNF4-208ENST00000507247 UNC45AQ9H3U1 944 aa16■□□□□ 0.15
RNF4-208ENST00000507247 TBC1D22BQ9NU19 505 aa16■□□□□ 0.15
RNF4-208ENST00000507247 LMBRD1Q9NUN5 540 aa16■□□□□ 0.15
RNF4-208ENST00000507247 NRBP1Q9UHY1 535 aa16■□□□□ 0.15
RNF4-208ENST00000507247 FRMPD3Q5JV73 1810 aa16■□□□□ 0.15
RNF4-208ENST00000507247 PP2D1A8MPX8 630 aa15.99■□□□□ 0.15
RNF4-208ENST00000507247 EML1O00423 815 aa15.99■□□□□ 0.15
RNF4-208ENST00000507247 FARP2O94887 1054 aaPredicted RBP15.99■□□□□ 0.15
RNF4-208ENST00000507247 GGPS1O95749 300 aa15.99■□□□□ 0.15
RNF4-208ENST00000507247 CCNE2O96020 404 aa15.99■□□□□ 0.15
RNF4-208ENST00000507247 GRK4P32298 578 aa15.99■□□□□ 0.15
RNF4-208ENST00000507247 MCM4P33991 863 aa15.99■□□□□ 0.15
RNF4-208ENST00000507247 ADALQ6DHV7 355 aa15.99■□□□□ 0.15
RNF4-208ENST00000507247 IQSEC1Q6DN90 963 aa15.99■□□□□ 0.15
RNF4-208ENST00000507247 SHC4Q6S5L8 630 aa15.99■□□□□ 0.15
RNF4-208ENST00000507247 USP49Q70CQ1 688 aa15.99■□□□□ 0.15
RNF4-208ENST00000507247 CYFIP1Q7L576 1253 aa15.99■□□□□ 0.15
RNF4-208ENST00000507247 SLAIN1Q8ND83 568 aa15.99■□□□□ 0.15
RNF4-208ENST00000507247 LENG1Q96BZ8 264 aaPredicted RBP15.99■□□□□ 0.15
RNF4-208ENST00000507247 SDF4Q9BRK5 362 aa15.99■□□□□ 0.15
RNF4-208ENST00000507247 POTEFA5A3E0 1075 aa15.98■□□□□ 0.15
RNF4-208ENST00000507247 CHMP2AO43633 222 aa15.98■□□□□ 0.15
RNF4-208ENST00000507247 INHAP05111 366 aa15.98■□□□□ 0.15
RNF4-208ENST00000507247 PRKAR2AP13861 404 aaKnown RBP15.98■□□□□ 0.15
RNF4-208ENST00000507247 CCND3P30281 292 aaPredicted RBP15.98■□□□□ 0.15
RNF4-208ENST00000507247 CDC25AP30304 524 aa15.98■□□□□ 0.15
RNF4-208ENST00000507247 LONP1P36776 959 aaKnown RBP15.98■□□□□ 0.15
RNF4-208ENST00000507247 ARHGAP1Q07960 439 aa15.98■□□□□ 0.15
RNF4-208ENST00000507247 NEDD9Q14511 834 aa15.98■□□□□ 0.15
RNF4-208ENST00000507247 DUSP28Q4G0W2 176 aa15.98■□□□□ 0.15
RNF4-208ENST00000507247 CELF3Q5SZQ8 465 aaKnown RBP15.98■□□□□ 0.15
RNF4-208ENST00000507247 MAP3K21Q5TCX8 1036 aa15.98■□□□□ 0.15
RNF4-208ENST00000507247 NCAPH2Q6IBW4 605 aa15.98■□□□□ 0.15
RNF4-208ENST00000507247 CTU1Q7Z7A3 348 aaKnown RBP15.98■□□□□ 0.15
RNF4-208ENST00000507247 ZNF579Q8NAF0 562 aaKnown RBP15.98■□□□□ 0.15
RNF4-208ENST00000507247 JPH1Q9HDC5 661 aaPredicted RBP15.98■□□□□ 0.15
RNF4-208ENST00000507247 SLC9A2Q9UBY0 812 aa15.98■□□□□ 0.15
RNF4-208ENST00000507247 A0A1W2PQ27 194 aa15.97■□□□□ 0.15
RNF4-208ENST00000507247 A0A1W2PQ64 194 aa15.97■□□□□ 0.15
RNF4-208ENST00000507247 A0A1W2PQD8 194 aa15.97■□□□□ 0.15
RNF4-208ENST00000507247 GOLGA6L22H0YM25 854 aa15.97■□□□□ 0.15
RNF4-208ENST00000507247 SP4Q02446 784 aa15.97■□□□□ 0.15
RNF4-208ENST00000507247 TNFAIP2Q03169 654 aa15.97■□□□□ 0.15
RNF4-208ENST00000507247 PDIA5Q14554 519 aa15.97■□□□□ 0.15
RNF4-208ENST00000507247 RESP18Q5W5W9 173 aa15.97■□□□□ 0.15
RNF4-208ENST00000507247 METTL7BQ6UX53 244 aa15.97■□□□□ 0.15
RNF4-208ENST00000507247 GIMAP8Q8ND71 665 aaPredicted RBP15.97■□□□□ 0.15
RNF4-208ENST00000507247 SYMPKQ92797 1274 aaKnown RBP15.97■□□□□ 0.15
RNF4-208ENST00000507247 EPSTI1Q96J88 318 aa15.97■□□□□ 0.15
RNF4-208ENST00000507247 MMTAG2Q9BU76 263 aaKnown RBP15.97■□□□□ 0.15
RNF4-208ENST00000507247 GOLPH3LQ9H4A5 285 aa15.97■□□□□ 0.15
RNF4-208ENST00000507247 LRWD1Q9UFC0 647 aa15.97■□□□□ 0.15
RNF4-208ENST00000507247 FAM184BQ9ULE4 1060 aa15.97■□□□□ 0.15
RNF4-208ENST00000507247 GNEQ9Y223 722 aaKnown RBP15.97■□□□□ 0.15
RNF4-208ENST00000507247 MYH9P35579 1960 aaKnown RBP15.96■□□□□ 0.15
RNF4-208ENST00000507247 NKRFO15226 690 aaKnown RBP eCLIP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms