RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 MLXIPQ9HAP2 919 aa20.69■□□□□ 0.9
NPHP4-210ENST00000506941 AGO4Q9HCK5 861 aaKnown RBP20.69■□□□□ 0.9
NPHP4-210ENST00000506941 BTBD18B2RXH4 712 aa20.68■□□□□ 0.9
NPHP4-210ENST00000506941 MAFGO15525 162 aa20.68■□□□□ 0.9
NPHP4-210ENST00000506941 CABYRO75952 493 aa20.68■□□□□ 0.9
NPHP4-210ENST00000506941 USP11P51784 963 aa20.68■□□□□ 0.9
NPHP4-210ENST00000506941 ITGB3BPQ13352 177 aaPredicted RBP20.68■□□□□ 0.9
NPHP4-210ENST00000506941 CUL4AQ13619 759 aa20.68■□□□□ 0.9
NPHP4-210ENST00000506941 TRIM29Q14134 588 aa20.68■□□□□ 0.9
NPHP4-210ENST00000506941 TRIM60Q495X7 471 aa20.68■□□□□ 0.9
NPHP4-210ENST00000506941 PLA2G4DQ86XP0 818 aa20.68■□□□□ 0.9
NPHP4-210ENST00000506941 DIS3L2Q8IYB7 885 aaKnown RBP20.68■□□□□ 0.9
NPHP4-210ENST00000506941 C7orf61Q8IZ16 206 aa20.68■□□□□ 0.9
NPHP4-210ENST00000506941 FAM184AQ8NB25 1140 aa20.68■□□□□ 0.9
NPHP4-210ENST00000506941 VTI1AQ96AJ9 217 aa20.68■□□□□ 0.9
NPHP4-210ENST00000506941 A0A0U1RQG5 324 aaPredicted RBP20.67■□□□□ 0.9
NPHP4-210ENST00000506941 CCDC194A0A1B0GVG4 234 aa20.67■□□□□ 0.9
NPHP4-210ENST00000506941 EVI5O60447 810 aa20.67■□□□□ 0.9
NPHP4-210ENST00000506941 ZNF286BP0CG31 522 aa20.67■□□□□ 0.9
NPHP4-210ENST00000506941 DGKDQ16760 1214 aa20.67■□□□□ 0.9
NPHP4-210ENST00000506941 PIK3AP1Q6ZUJ8 805 aa20.67■□□□□ 0.9
NPHP4-210ENST00000506941 FBXO18Q8NFZ0 1043 aa20.67■□□□□ 0.9
NPHP4-210ENST00000506941 KAT2BQ92831 832 aa20.67■□□□□ 0.9
NPHP4-210ENST00000506941 UIMC1Q96RL1 719 aa20.67■□□□□ 0.9
NPHP4-210ENST00000506941 GPR20Q99678 358 aa20.67■□□□□ 0.9
NPHP4-210ENST00000506941 MTG1Q9BT17 334 aaPredicted RBP20.67■□□□□ 0.9
NPHP4-210ENST00000506941 BRMS1Q9HCU9 246 aa20.67■□□□□ 0.9
NPHP4-210ENST00000506941 ATP11BQ9Y2G3 1177 aa20.67■□□□□ 0.9
NPHP4-210ENST00000506941 KPNA6O60684 536 aa20.66■□□□□ 0.9
NPHP4-210ENST00000506941 TDP2O95551 362 aa20.66■□□□□ 0.9
NPHP4-210ENST00000506941 GJB2P29033 226 aa20.66■□□□□ 0.9
NPHP4-210ENST00000506941 CDK7P50613 346 aa20.66■□□□□ 0.9
NPHP4-210ENST00000506941 SP4Q02446 784 aa20.66■□□□□ 0.9
NPHP4-210ENST00000506941 PRR16Q569H4 304 aa20.66■□□□□ 0.9
NPHP4-210ENST00000506941 SLC43A3Q8NBI5 491 aa20.66■□□□□ 0.9
NPHP4-210ENST00000506941 GIMAP8Q8ND71 665 aaPredicted RBP20.66■□□□□ 0.9
NPHP4-210ENST00000506941 PPP1R13LQ8WUF5 828 aa20.66■□□□□ 0.9
NPHP4-210ENST00000506941 PCDH10Q9P2E7 1040 aa20.66■□□□□ 0.9
NPHP4-210ENST00000506941 NFASCO94856 1347 aa20.65■□□□□ 0.9
NPHP4-210ENST00000506941 CYP3A7-CYP3A51PA0A087WV96 503 aa20.65■□□□□ 0.9
NPHP4-210ENST00000506941 ARVCFO00192 962 aa20.65■□□□□ 0.9
NPHP4-210ENST00000506941 CYP3A7P24462 503 aa20.65■□□□□ 0.9
NPHP4-210ENST00000506941 SETQ01105 290 aaPredicted RBP20.65■□□□□ 0.9
NPHP4-210ENST00000506941 TLE2Q04725 743 aa20.65■□□□□ 0.9
NPHP4-210ENST00000506941 ITGA7Q13683 1181 aa20.65■□□□□ 0.9
NPHP4-210ENST00000506941 MBOAT7Q96N66 472 aa20.65■□□□□ 0.9
NPHP4-210ENST00000506941 K7ELQ4 463 aaPredicted RBP20.64■□□□□ 0.89
NPHP4-210ENST00000506941 IPO5O00410 1097 aaKnown RBP20.64■□□□□ 0.89
NPHP4-210ENST00000506941 NOP56O00567 594 aaKnown RBP20.64■□□□□ 0.89
NPHP4-210ENST00000506941 DHX15O43143 795 aaKnown RBP20.64■□□□□ 0.89
NPHP4-210ENST00000506941 PQBP1O60828 265 aaKnown RBP20.64■□□□□ 0.89
NPHP4-210ENST00000506941 PPFIA4O75335 1185 aa20.64■□□□□ 0.89
NPHP4-210ENST00000506941 ANKRD33Q7Z3H0 272 aa20.64■□□□□ 0.89
NPHP4-210ENST00000506941 NEK8Q86SG6 692 aa20.64■□□□□ 0.89
NPHP4-210ENST00000506941 SNX21Q969T3 373 aa20.64■□□□□ 0.89
NPHP4-210ENST00000506941 JPH1Q9HDC5 661 aaPredicted RBP20.64■□□□□ 0.89
NPHP4-210ENST00000506941 SLC9A2Q9UBY0 812 aa20.64■□□□□ 0.89
NPHP4-210ENST00000506941 SMC3Q9UQE7 1217 aa20.64■□□□□ 0.89
NPHP4-210ENST00000506941 GSTTP1A0A1W2PQM5 241 aa20.63■□□□□ 0.89
NPHP4-210ENST00000506941 MSH4O15457 936 aa20.63■□□□□ 0.89
NPHP4-210ENST00000506941 F2P00734 622 aa20.63■□□□□ 0.89
NPHP4-210ENST00000506941 LGALS2P05162 132 aa20.63■□□□□ 0.89
NPHP4-210ENST00000506941 LETM2Q2VYF4 491 aa20.63■□□□□ 0.89
NPHP4-210ENST00000506941 NBPF20Q3BBV1 942 aa20.63■□□□□ 0.89
NPHP4-210ENST00000506941 Q4G0T1 1027 aa20.63■□□□□ 0.89
NPHP4-210ENST00000506941 MOXD1Q6UVY6 613 aa20.63■□□□□ 0.89
NPHP4-210ENST00000506941 SDF4Q9BRK5 362 aa20.63■□□□□ 0.89
NPHP4-210ENST00000506941 ZNF577Q9BSK1 485 aa20.63■□□□□ 0.89
NPHP4-210ENST00000506941 C16orf70Q9BSU1 422 aa20.63■□□□□ 0.89
NPHP4-210ENST00000506941 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.63■□□□□ 0.89
NPHP4-210ENST00000506941 KIF28PB7ZC32 967 aa20.62■□□□□ 0.89
NPHP4-210ENST00000506941 H0YGN5 161 aa20.62■□□□□ 0.89
NPHP4-210ENST00000506941 DDX39AO00148 427 aaKnown RBP20.62■□□□□ 0.89
NPHP4-210ENST00000506941 HAS3O00219 553 aa20.62■□□□□ 0.89
NPHP4-210ENST00000506941 WNT7AO00755 349 aa20.62■□□□□ 0.89
NPHP4-210ENST00000506941 SLC37A4O43826 429 aa20.62■□□□□ 0.89
NPHP4-210ENST00000506941 CCNE2O96020 404 aa20.62■□□□□ 0.89
NPHP4-210ENST00000506941 SAFBQ15424 915 aaKnown RBP eCLIP20.62■□□□□ 0.89
NPHP4-210ENST00000506941 TRIM50Q86XT4 487 aa20.62■□□□□ 0.89
NPHP4-210ENST00000506941 FAM126BQ8IXS8 530 aa20.62■□□□□ 0.89
NPHP4-210ENST00000506941 GJA10Q969M2 543 aa20.62■□□□□ 0.89
NPHP4-210ENST00000506941 PDLIM7Q9NR12 457 aa20.62■□□□□ 0.89
NPHP4-210ENST00000506941 ZMYND8Q9ULU4 1186 aaPredicted RBP20.62■□□□□ 0.89
NPHP4-210ENST00000506941 KIF3AQ9Y496 699 aa20.62■□□□□ 0.89
NPHP4-210ENST00000506941 NR2E3Q9Y5X4 410 aa20.62■□□□□ 0.89
NPHP4-210ENST00000506941 MYH15Q9Y2K3 1946 aa20.62■□□□□ 0.89
NPHP4-210ENST00000506941 TANC1Q9C0D5 1861 aa20.62■□□□□ 0.89
NPHP4-210ENST00000506941 MROH7Q68CQ1 1323 aa20.61■□□□□ 0.89
NPHP4-210ENST00000506941 TCF7P36402 384 aaPredicted RBP20.61■□□□□ 0.89
NPHP4-210ENST00000506941 PSEN2P49810 448 aa20.61■□□□□ 0.89
NPHP4-210ENST00000506941 CHMP4BP1P59074 171 aa20.61■□□□□ 0.89
NPHP4-210ENST00000506941 FAAP100Q0VG06 881 aa20.61■□□□□ 0.89
NPHP4-210ENST00000506941 MFSD10Q14728 455 aa20.61■□□□□ 0.89
NPHP4-210ENST00000506941 SH3RF1Q7Z6J0 888 aa20.61■□□□□ 0.89
NPHP4-210ENST00000506941 ETNPPLQ8TBG4 499 aa20.61■□□□□ 0.89
NPHP4-210ENST00000506941 SLC5A5Q92911 643 aa20.61■□□□□ 0.89
NPHP4-210ENST00000506941 TOX2Q96NM4 488 aa20.61■□□□□ 0.89
NPHP4-210ENST00000506941 FOXP1Q9H334 677 aaPredicted RBP20.61■□□□□ 0.89
NPHP4-210ENST00000506941 DDX25Q9UHL0 483 aaKnown RBP20.61■□□□□ 0.89
NPHP4-210ENST00000506941 RANBP2P49792 3224 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms