RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 CUL5Q93034 780 aa16.81■□□□□ 0.28
SEC24D-208ENST00000506622 HLA-CQ95604 372 aa16.81■□□□□ 0.28
SEC24D-208ENST00000506622 RRP36Q96EU6 259 aaKnown RBP16.81■□□□□ 0.28
SEC24D-208ENST00000506622 TGS1Q96RS0 853 aaKnown RBP16.81■□□□□ 0.28
SEC24D-208ENST00000506622 RTEL1Q9NZ71 1219 aa16.81■□□□□ 0.28
SEC24D-208ENST00000506622 LMCD1Q9NZU5 365 aa16.81■□□□□ 0.28
SEC24D-208ENST00000506622 TAF6LQ9Y6J9 622 aa16.81■□□□□ 0.28
SEC24D-208ENST00000506622 DOCK5Q9H7D0 1870 aa16.81■□□□□ 0.28
SEC24D-208ENST00000506622 SPATA31C2B4DYI2 1134 aa16.8■□□□□ 0.28
SEC24D-208ENST00000506622 AMHP03971 560 aa16.8■□□□□ 0.28
SEC24D-208ENST00000506622 GNAT1P11488 350 aa16.8■□□□□ 0.28
SEC24D-208ENST00000506622 ICAM3P32942 547 aa16.8■□□□□ 0.28
SEC24D-208ENST00000506622 KIF5BP33176 963 aa16.8■□□□□ 0.28
SEC24D-208ENST00000506622 METTL7BQ6UX53 244 aa16.8■□□□□ 0.28
SEC24D-208ENST00000506622 CYFIP1Q7L576 1253 aa16.8■□□□□ 0.28
SEC24D-208ENST00000506622 DBF4BQ8NFT6 615 aa16.8■□□□□ 0.28
SEC24D-208ENST00000506622 SMARCC2Q8TAQ2 1214 aa16.8■□□□□ 0.28
SEC24D-208ENST00000506622 INPP4AQ96PE3 977 aaPredicted RBP16.8■□□□□ 0.28
SEC24D-208ENST00000506622 MAP3K14Q99558 947 aa16.8■□□□□ 0.28
SEC24D-208ENST00000506622 RNPEPQ9H4A4 650 aa16.8■□□□□ 0.28
SEC24D-208ENST00000506622 BCAS3Q9H6U6 928 aa16.8■□□□□ 0.28
SEC24D-208ENST00000506622 SEC63Q9UGP8 760 aaKnown RBP16.8■□□□□ 0.28
SEC24D-208ENST00000506622 MTUS1Q9ULD2 1270 aa16.8■□□□□ 0.28
SEC24D-208ENST00000506622 INSL6Q9Y581 213 aa16.8■□□□□ 0.28
SEC24D-208ENST00000506622 MICAL3Q7RTP6 2002 aa16.8■□□□□ 0.28
SEC24D-208ENST00000506622 TREHO43280 583 aa16.79■□□□□ 0.28
SEC24D-208ENST00000506622 FIBPO43427 364 aa16.79■□□□□ 0.28
SEC24D-208ENST00000506622 LPXNO60711 386 aa16.79■□□□□ 0.28
SEC24D-208ENST00000506622 SMIM10L2AP0DMW4 78 aa16.79■□□□□ 0.28
SEC24D-208ENST00000506622 SMIM10L2BP0DMW5 78 aa16.79■□□□□ 0.28
SEC24D-208ENST00000506622 SMARCA1P28370 1054 aa16.79■□□□□ 0.28
SEC24D-208ENST00000506622 ANTXR2P58335 489 aa16.79■□□□□ 0.28
SEC24D-208ENST00000506622 ERVK-21P61565 698 aa16.79■□□□□ 0.28
SEC24D-208ENST00000506622 CASC1Q6TDU7 716 aa16.79■□□□□ 0.28
SEC24D-208ENST00000506622 MB21D2Q8IYB1 491 aaPredicted RBP16.79■□□□□ 0.28
SEC24D-208ENST00000506622 ZNF654Q8IZM8 581 aa16.79■□□□□ 0.28
SEC24D-208ENST00000506622 GDPD5Q8WTR4 605 aa16.79■□□□□ 0.28
SEC24D-208ENST00000506622 NECAB3Q96P71 396 aaPredicted RBP16.79■□□□□ 0.28
SEC24D-208ENST00000506622 LZTS2Q9BRK4 669 aa16.79■□□□□ 0.28
SEC24D-208ENST00000506622 SPZ1Q9BXG8 430 aa16.79■□□□□ 0.28
SEC24D-208ENST00000506622 ZNF215Q9UL58 517 aaPredicted RBP16.79■□□□□ 0.28
SEC24D-208ENST00000506622 RBM8AQ9Y5S9 174 aaKnown RBP16.79■□□□□ 0.28
SEC24D-208ENST00000506622 FRMPD4Q14CM0 1322 aa16.79■□□□□ 0.28
SEC24D-208ENST00000506622 LINC01553A4QN01 128 aa16.78■□□□□ 0.28
SEC24D-208ENST00000506622 DDAH1O94760 285 aa16.78■□□□□ 0.28
SEC24D-208ENST00000506622 COL9A1P20849 921 aa16.78■□□□□ 0.28
SEC24D-208ENST00000506622 XRRA1Q6P2D8 792 aa16.78■□□□□ 0.28
SEC24D-208ENST00000506622 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.78■□□□□ 0.28
SEC24D-208ENST00000506622 NFXL1Q6ZNB6 911 aa16.78■□□□□ 0.28
SEC24D-208ENST00000506622 MYOCDQ8IZQ8 938 aa16.78■□□□□ 0.28
SEC24D-208ENST00000506622 TMTC2Q8N394 836 aa16.78■□□□□ 0.28
SEC24D-208ENST00000506622 GPR20Q99678 358 aa16.78■□□□□ 0.28
SEC24D-208ENST00000506622 SUGCTQ9HAC7 445 aa16.78■□□□□ 0.28
SEC24D-208ENST00000506622 LY9Q9HBG7 655 aa16.78■□□□□ 0.28
SEC24D-208ENST00000506622 COL4A4P53420 1690 aaPredicted RBP16.78■□□□□ 0.28
SEC24D-208ENST00000506622 SIP14410 1827 aa16.78■□□□□ 0.28
SEC24D-208ENST00000506622 CAND2O75155 1236 aa16.77■□□□□ 0.28
SEC24D-208ENST00000506622 HOXC8P31273 242 aa16.77■□□□□ 0.28
SEC24D-208ENST00000506622 GNAQP50148 359 aa16.77■□□□□ 0.28
SEC24D-208ENST00000506622 PLEKHG4Q58EX7 1191 aa16.77■□□□□ 0.28
SEC24D-208ENST00000506622 UTP14CQ5TAP6 766 aaKnown RBP16.77■□□□□ 0.28
SEC24D-208ENST00000506622 PCNX4Q63HM2 1172 aa16.77■□□□□ 0.28
SEC24D-208ENST00000506622 USP17L6PQ6QN14 398 aa16.77■□□□□ 0.28
SEC24D-208ENST00000506622 NLRX1Q86UT6 975 aa16.77■□□□□ 0.28
SEC24D-208ENST00000506622 GIMAP8Q8ND71 665 aaPredicted RBP16.77■□□□□ 0.28
SEC24D-208ENST00000506622 SEPT8Q92599 483 aa16.77■□□□□ 0.28
SEC24D-208ENST00000506622 SENP7Q9BQF6 1050 aa16.77■□□□□ 0.28
SEC24D-208ENST00000506622 MTA3Q9BTC8 594 aa16.77■□□□□ 0.28
SEC24D-208ENST00000506622 MYL10Q9BUA6 226 aa16.77■□□□□ 0.28
SEC24D-208ENST00000506622 SETD4Q9NVD3 440 aa16.77■□□□□ 0.28
SEC24D-208ENST00000506622 CCDC69A6NI79 296 aa16.76■□□□□ 0.27
SEC24D-208ENST00000506622 PIK3CDO00329 1044 aa16.76■□□□□ 0.27
SEC24D-208ENST00000506622 PRC1O43663 620 aa16.76■□□□□ 0.27
SEC24D-208ENST00000506622 CTSHP09668 335 aa16.76■□□□□ 0.27
SEC24D-208ENST00000506622 MCM5P33992 734 aa16.76■□□□□ 0.27
SEC24D-208ENST00000506622 SP4Q02446 784 aa16.76■□□□□ 0.27
SEC24D-208ENST00000506622 SEMA3FQ13275 785 aa16.76■□□□□ 0.27
SEC24D-208ENST00000506622 MEIS2O14770 477 aa16.75■□□□□ 0.27
SEC24D-208ENST00000506622 IRX6P78412 446 aaPredicted RBP16.75■□□□□ 0.27
SEC24D-208ENST00000506622 ARHGAP4P98171 946 aa16.75■□□□□ 0.27
SEC24D-208ENST00000506622 TRIM50Q86XT4 487 aa16.75■□□□□ 0.27
SEC24D-208ENST00000506622 FBXO22Q8NEZ5 403 aa16.75■□□□□ 0.27
SEC24D-208ENST00000506622 CDHR1Q96JP9 859 aa16.75■□□□□ 0.27
SEC24D-208ENST00000506622 TMEM87BQ96K49 555 aa16.75■□□□□ 0.27
SEC24D-208ENST00000506622 PSTPIP2Q9H939 334 aa16.75■□□□□ 0.27
SEC24D-208ENST00000506622 CALM1P0DP23 149 aa16.74■□□□□ 0.27
SEC24D-208ENST00000506622 CALM2P0DP24 149 aa16.74■□□□□ 0.27
SEC24D-208ENST00000506622 CALM3P0DP25 149 aa16.74■□□□□ 0.27
SEC24D-208ENST00000506622 HTRA4P83105 476 aaPredicted RBP16.74■□□□□ 0.27
SEC24D-208ENST00000506622 SRBD1Q8N5C6 995 aaKnown RBP16.74■□□□□ 0.27
SEC24D-208ENST00000506622 YME1L1Q96TA2 773 aa16.74■□□□□ 0.27
SEC24D-208ENST00000506622 C1QTNF1Q9BXJ1 281 aa16.74■□□□□ 0.27
SEC24D-208ENST00000506622 NRCAMQ92823 1304 aa16.74■□□□□ 0.27
SEC24D-208ENST00000506622 MYO7AQ13402 2215 aa16.74■□□□□ 0.27
SEC24D-208ENST00000506622 RBAK-RBAKDNI3L0D1 243 aa16.73■□□□□ 0.27
SEC24D-208ENST00000506622 SH2B2O14492 632 aaPredicted RBP16.73■□□□□ 0.27
SEC24D-208ENST00000506622 UPP2O95045 317 aa16.73■□□□□ 0.27
SEC24D-208ENST00000506622 PLEKHA8P1O95397 391 aa16.73■□□□□ 0.27
SEC24D-208ENST00000506622 MKRN4PQ13434 485 aaPredicted RBP16.73■□□□□ 0.27
SEC24D-208ENST00000506622 CMTR1Q8N1G2 835 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms