RNA–Protein interactions for RNA: ENST00000506400.1

TRIM23-205, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-205ENST00000506400 LAMC2Q13753 1193 aa12.65□□□□□ -0.38
TRIM23-205ENST00000506400 SLC39A14Q15043 492 aa12.65□□□□□ -0.38
TRIM23-205ENST00000506400 STK38Q15208 465 aa12.65□□□□□ -0.38
TRIM23-205ENST00000506400 PTPAQ15257 358 aa12.65□□□□□ -0.38
TRIM23-205ENST00000506400 TMEM266Q2M3C6 531 aa12.65□□□□□ -0.38
TRIM23-205ENST00000506400 DTHD1Q6ZMT9 781 aa12.65□□□□□ -0.38
TRIM23-205ENST00000506400 DHX37Q8IY37 1157 aaKnown RBP12.65□□□□□ -0.38
TRIM23-205ENST00000506400 LINC00301Q8NCQ3 95 aa12.65□□□□□ -0.38
TRIM23-205ENST00000506400 KCNG4Q8TDN1 519 aa12.65□□□□□ -0.38
TRIM23-205ENST00000506400 HAS1Q92839 578 aa12.65□□□□□ -0.38
TRIM23-205ENST00000506400 FTOQ9C0B1 505 aaKnown RBP eCLIP12.65□□□□□ -0.38
TRIM23-205ENST00000506400 SCAND2PQ9GZW5 306 aaPredicted RBP12.65□□□□□ -0.38
TRIM23-205ENST00000506400 MLXIPQ9HAP2 919 aa12.65□□□□□ -0.38
TRIM23-205ENST00000506400 PKD2L1Q9P0L9 805 aa12.65□□□□□ -0.38
TRIM23-205ENST00000506400 PCDHA12Q9UN75 941 aa12.65□□□□□ -0.38
TRIM23-205ENST00000506400 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.64□□□□□ -0.39
TRIM23-205ENST00000506400 SPTLC2O15270 562 aa12.64□□□□□ -0.39
TRIM23-205ENST00000506400 PPP6R2O75170 966 aa12.64□□□□□ -0.39
TRIM23-205ENST00000506400 PSMD10O75832 226 aa12.64□□□□□ -0.39
TRIM23-205ENST00000506400 RARBP10826 455 aa12.64□□□□□ -0.39
TRIM23-205ENST00000506400 KRT76Q01546 638 aa12.64□□□□□ -0.39
TRIM23-205ENST00000506400 ITGB3BPQ13352 177 aaPredicted RBP12.64□□□□□ -0.39
TRIM23-205ENST00000506400 CELF3Q5SZQ8 465 aaKnown RBP12.64□□□□□ -0.39
TRIM23-205ENST00000506400 METTL7BQ6UX53 244 aa12.64□□□□□ -0.39
TRIM23-205ENST00000506400 TNPO1Q92973 898 aaKnown RBP12.64□□□□□ -0.39
TRIM23-205ENST00000506400 EMID1Q96A84 441 aaPredicted RBP12.64□□□□□ -0.39
TRIM23-205ENST00000506400 FERMT2Q96AC1 680 aa12.64□□□□□ -0.39
TRIM23-205ENST00000506400 ARMC5Q96C12 935 aa12.64□□□□□ -0.39
TRIM23-205ENST00000506400 RAB34Q9BZG1 259 aa12.64□□□□□ -0.39
TRIM23-205ENST00000506400 TTC12Q9H892 705 aaPredicted RBP12.64□□□□□ -0.39
TRIM23-205ENST00000506400 SPC25Q9HBM1 224 aa12.64□□□□□ -0.39
TRIM23-205ENST00000506400 JPH1Q9HDC5 661 aaPredicted RBP12.64□□□□□ -0.39
TRIM23-205ENST00000506400 SLC9A2Q9UBY0 812 aa12.64□□□□□ -0.39
TRIM23-205ENST00000506400 DDX20Q9UHI6 824 aaKnown RBP12.64□□□□□ -0.39
TRIM23-205ENST00000506400 RCOR1Q9UKL0 485 aa12.64□□□□□ -0.39
TRIM23-205ENST00000506400 GNEQ9Y223 722 aaKnown RBP12.64□□□□□ -0.39
TRIM23-205ENST00000506400 DHX15O43143 795 aaKnown RBP12.63□□□□□ -0.39
TRIM23-205ENST00000506400 FARP2O94887 1054 aaPredicted RBP12.63□□□□□ -0.39
TRIM23-205ENST00000506400 SFNP31947 248 aa12.63□□□□□ -0.39
TRIM23-205ENST00000506400 FXR2P51116 673 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRIM23-205ENST00000506400 ARHGAP1Q07960 439 aa12.63□□□□□ -0.39
TRIM23-205ENST00000506400 PPP2R5CQ13362 524 aa12.63□□□□□ -0.39
TRIM23-205ENST00000506400 CSPP1Q1MSJ5 1256 aa12.63□□□□□ -0.39
TRIM23-205ENST00000506400 BRDTQ58F21 947 aaPredicted RBP12.63□□□□□ -0.39
TRIM23-205ENST00000506400 ZNF746Q6NUN9 644 aaPredicted RBP12.63□□□□□ -0.39
TRIM23-205ENST00000506400 CYFIP1Q7L576 1253 aa12.63□□□□□ -0.39
TRIM23-205ENST00000506400 TLK2Q86UE8 772 aa12.63□□□□□ -0.39
TRIM23-205ENST00000506400 RDM1Q8NG50 284 aa12.63□□□□□ -0.39
TRIM23-205ENST00000506400 OR6J1Q8NGC5 347 aa12.63□□□□□ -0.39
TRIM23-205ENST00000506400 SPATA32Q96LK8 384 aa12.63□□□□□ -0.39
TRIM23-205ENST00000506400 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRIM23-205ENST00000506400 AP5M1Q9H0R1 490 aa12.63□□□□□ -0.39
TRIM23-205ENST00000506400 SRPRBQ9Y5M8 271 aaKnown RBP12.63□□□□□ -0.39
TRIM23-205ENST00000506400 STK24Q9Y6E0 443 aa12.63□□□□□ -0.39
TRIM23-205ENST00000506400 MYH7BA7E2Y1 1941 aa12.62□□□□□ -0.39
TRIM23-205ENST00000506400 DDX39AO00148 427 aaKnown RBP12.62□□□□□ -0.39
TRIM23-205ENST00000506400 NOP56O00567 594 aaKnown RBP12.62□□□□□ -0.39
TRIM23-205ENST00000506400 DYNC1LI2O43237 492 aaPredicted RBP12.62□□□□□ -0.39
TRIM23-205ENST00000506400 CCL5P13501 91 aa12.62□□□□□ -0.39
TRIM23-205ENST00000506400 MARCKSP29966 332 aaPredicted RBP12.62□□□□□ -0.39
TRIM23-205ENST00000506400 TECP42680 631 aa12.62□□□□□ -0.39
TRIM23-205ENST00000506400 JAK3P52333 1124 aa12.62□□□□□ -0.39
TRIM23-205ENST00000506400 NKX3-2P78367 333 aa12.62□□□□□ -0.39
TRIM23-205ENST00000506400 PDIA5Q14554 519 aa12.62□□□□□ -0.39
TRIM23-205ENST00000506400 TMEM63BQ5T3F8 832 aa12.62□□□□□ -0.39
TRIM23-205ENST00000506400 CLEC17AQ6ZS10 378 aa12.62□□□□□ -0.39
TRIM23-205ENST00000506400 SMAP1Q8IYB5 467 aaPredicted RBP12.62□□□□□ -0.39
TRIM23-205ENST00000506400 KRI1Q8N9T8 703 aaKnown RBP12.62□□□□□ -0.39
TRIM23-205ENST00000506400 LEO1Q8WVC0 666 aaPredicted RBP12.62□□□□□ -0.39
TRIM23-205ENST00000506400 COPS5Q92905 334 aa12.62□□□□□ -0.39
TRIM23-205ENST00000506400 ZNF333Q96JL9 665 aa12.62□□□□□ -0.39
TRIM23-205ENST00000506400 SPATA33Q96N06 139 aa12.62□□□□□ -0.39
TRIM23-205ENST00000506400 UIMC1Q96RL1 719 aa12.62□□□□□ -0.39
TRIM23-205ENST00000506400 MCOLN1Q9GZU1 580 aa12.62□□□□□ -0.39
TRIM23-205ENST00000506400 UNC93B1Q9H1C4 597 aa12.62□□□□□ -0.39
TRIM23-205ENST00000506400 UNC45AQ9H3U1 944 aa12.62□□□□□ -0.39
TRIM23-205ENST00000506400 XPNPEP3Q9NQH7 507 aa12.62□□□□□ -0.39
TRIM23-205ENST00000506400 VAV3Q9UKW4 847 aa12.62□□□□□ -0.39
TRIM23-205ENST00000506400 ELP1O95163 1332 aa12.62□□□□□ -0.39
TRIM23-205ENST00000506400 VWA3AA6NCI4 1184 aa12.61□□□□□ -0.39
TRIM23-205ENST00000506400 ADCY6O43306 1168 aa12.61□□□□□ -0.39
TRIM23-205ENST00000506400 CUTAO60888 179 aa12.61□□□□□ -0.39
TRIM23-205ENST00000506400 ATG7O95352 703 aa12.61□□□□□ -0.39
TRIM23-205ENST00000506400 CAPN2P17655 700 aa12.61□□□□□ -0.39
TRIM23-205ENST00000506400 LONP1P36776 959 aaKnown RBP12.61□□□□□ -0.39
TRIM23-205ENST00000506400 ME1P48163 572 aa12.61□□□□□ -0.39
TRIM23-205ENST00000506400 CPT1AP50416 773 aa12.61□□□□□ -0.39
TRIM23-205ENST00000506400 GJA9P57773 515 aa12.61□□□□□ -0.39
TRIM23-205ENST00000506400 MTFR1Q15390 333 aa12.61□□□□□ -0.39
TRIM23-205ENST00000506400 GJC2Q5T442 439 aaPredicted RBP12.61□□□□□ -0.39
TRIM23-205ENST00000506400 B3GNT9Q6UX72 402 aa12.61□□□□□ -0.39
TRIM23-205ENST00000506400 MIER3Q7Z3K6 550 aa12.61□□□□□ -0.39
TRIM23-205ENST00000506400 PPTC7Q8NI37 304 aa12.61□□□□□ -0.39
TRIM23-205ENST00000506400 SEPT1Q8WYJ6 367 aa12.61□□□□□ -0.39
TRIM23-205ENST00000506400 GJA10Q969M2 543 aa12.61□□□□□ -0.39
TRIM23-205ENST00000506400 AK8Q96MA6 479 aa12.61□□□□□ -0.39
TRIM23-205ENST00000506400 GBP4Q96PP9 640 aa12.61□□□□□ -0.39
TRIM23-205ENST00000506400 RNF208Q9H0X6 261 aa12.61□□□□□ -0.39
TRIM23-205ENST00000506400 UPF3AQ9H1J1 476 aaKnown RBP12.61□□□□□ -0.39
TRIM23-205ENST00000506400 BCAS3Q9H6U6 928 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms