RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 HGSNATQ68CP4 663 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 FOXR1Q6PIV2 292 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 POTEBQ6S5H4 581 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 GPBP1Q86WP2 473 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 PROM2Q8N271 834 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 MS4A14Q96JA4 679 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 LSM14BQ9BX40 385 aaKnown RBP8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 ZC3H12CQ9C0D7 883 aaKnown RBP8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 PCDHA1Q9Y5I3 950 aa8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.42□□□□□ -1.06
PPARGC1A-204ENST00000506055 GOLGA6BA6NDN3 693 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 FAM196BA6NMK8 535 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 PRLRP16471 622 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 EPS15P42566 896 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 TCP10Q12799 353 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 SHROOM1Q2M3G4 852 aaPredicted RBP8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 ASTE1Q2TB18 679 aaPredicted RBP8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 ZCWPW2Q504Y3 356 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 GPATCH4Q5T3I0 446 aaKnown RBP8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 ZFPM1Q8IX07 1006 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 CCDC65Q8IXS2 484 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 MMGT1Q8N4V1 131 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 AFAP1L1Q8TED9 768 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 NOX5Q96PH1 765 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 NT5C3AQ9H0P0 336 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 PLEKHA4Q9H4M7 779 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 LCMT1Q9UIC8 334 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 FAM184BQ9ULE4 1060 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 HYOU1Q9Y4L1 999 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 PLIN4Q96Q06 1357 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 G3V3G9 751 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 TULP2O00295 520 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 PPEF1O14829 653 aaPredicted RBP8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 TLR2O60603 784 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 TCP1P17987 556 aaKnown RBP8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 PAFAH1B1P43034 410 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 CACNB3P54284 484 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 SNAP25P60880 206 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 NFIAQ12857 509 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 ADAM9Q13443 819 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 RAPGEF1Q13905 1077 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 DCAF8Q5TAQ9 597 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 KLHDC7AQ5VTJ3 777 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 PPP1R18Q6NYC8 613 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 CDC42EP5Q6NZY7 148 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 SND1Q7KZF4 910 aaKnown RBP eCLIP8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 TBC1D5Q92609 795 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 TLR10Q9BXR5 811 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 EMILIN3Q9NT22 766 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 CEP72Q9P209 647 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 SWAP70Q9UH65 585 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 ADAMTS1Q9UHI8 967 aa8.41□□□□□ -1.06
PPARGC1A-204ENST00000506055 ZC3H4Q9UPT8 1303 aaKnown RBP8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 POTEFA5A3E0 1075 aa8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 AGPSO00116 658 aa8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 MEIS1O00470 390 aa8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 PRPF6O94906 941 aaKnown RBP8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 SERPING1P05155 500 aa8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 HLA-DOAP06340 250 aa8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 POTEIP0CG38 1075 aa8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 GCFC2P16383 781 aaKnown RBP8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 HOXA10P31260 410 aaPredicted RBP8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 RNASE9P60153 205 aaKnown RBP8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 DDR1Q08345 913 aa8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 SEPT2Q15019 361 aa8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 POTEGQ6S5H5 508 aa8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 POTEEQ6S8J3 1075 aa8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 FAM133AQ8N9E0 248 aa8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 AENQ8WTP8 325 aaKnown RBP8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 SCFD1Q8WVM8 642 aa8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 POLD4Q9HCU8 107 aa8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 RBM12Q9NTZ6 932 aaKnown RBP8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 KDM3AQ9Y4C1 1321 aa8.4□□□□□ -1.06
PPARGC1A-204ENST00000506055 SSU72P8A0A1W2PR75 194 aa8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 PJA2O43164 708 aa8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 MED24O75448 989 aa8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 PALMO75781 387 aa8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 FTCDO95954 541 aa8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 IVLP07476 585 aa8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 CYP11B2P19099 503 aa8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 PSMC6P62333 389 aa8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 MAPK8IP2Q13387 824 aaPredicted RBP8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 QRICH1Q2TAL8 776 aa8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 PRR16Q569H4 304 aa8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 ARSHQ5FYA8 562 aa8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 LRRC31Q6UY01 552 aa8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 CRAMP1Q96RY5 1269 aa8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 EDEM3Q9BZQ6 932 aa8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 COA1Q9GZY4 146 aa8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 RSPH14Q9UHP6 348 aa8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 PACSIN2Q9UNF0 486 aaPredicted RBP8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 ATF5Q9Y2D1 282 aaPredicted RBP8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 ATP6V0A2Q9Y487 856 aa8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 PCDHA2Q9Y5H9 948 aa8.4□□□□□ -1.07
PPARGC1A-204ENST00000506055 A0A087X0T9 212 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 TRIM66O15016 1216 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 FAM228BP0C875 321 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 EEF2P13639 858 aaKnown RBP8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 CASP5P51878 434 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 KLHL30Q0D2K2 578 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms