RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 RSPH10BP0C881 870 aa13.14□□□□□ -0.31
SIL1-208ENST00000505945 SMIM10L2AP0DMW4 78 aa13.14□□□□□ -0.31
SIL1-208ENST00000505945 SMIM10L2BP0DMW5 78 aa13.14□□□□□ -0.31
SIL1-208ENST00000505945 IRX6P78412 446 aaPredicted RBP13.14□□□□□ -0.31
SIL1-208ENST00000505945 GNPTABQ3T906 1256 aa13.14□□□□□ -0.31
SIL1-208ENST00000505945 CYFIP1Q7L576 1253 aa13.14□□□□□ -0.31
SIL1-208ENST00000505945 DBF4BQ8NFT6 615 aa13.14□□□□□ -0.31
SIL1-208ENST00000505945 GDPD5Q8WTR4 605 aa13.14□□□□□ -0.31
SIL1-208ENST00000505945 MAP4K1Q92918 833 aa13.14□□□□□ -0.31
SIL1-208ENST00000505945 INPP4AQ96PE3 977 aaPredicted RBP13.14□□□□□ -0.31
SIL1-208ENST00000505945 MYL10Q9BUA6 226 aa13.14□□□□□ -0.31
SIL1-208ENST00000505945 RNPEPQ9H4A4 650 aa13.14□□□□□ -0.31
SIL1-208ENST00000505945 SUGCTQ9HAC7 445 aa13.14□□□□□ -0.31
SIL1-208ENST00000505945 TELO2Q9Y4R8 837 aa13.14□□□□□ -0.31
SIL1-208ENST00000505945 BRWD1Q9NSI6 2320 aa13.14□□□□□ -0.31
SIL1-208ENST00000505945 LINC01553A4QN01 128 aa13.13□□□□□ -0.31
SIL1-208ENST00000505945 COL9A1P20849 921 aa13.13□□□□□ -0.31
SIL1-208ENST00000505945 ICAM3P32942 547 aa13.13□□□□□ -0.31
SIL1-208ENST00000505945 ERVK-21P61565 698 aa13.13□□□□□ -0.31
SIL1-208ENST00000505945 SEMA3FQ13275 785 aa13.13□□□□□ -0.31
SIL1-208ENST00000505945 USP17L6PQ6QN14 398 aa13.13□□□□□ -0.31
SIL1-208ENST00000505945 MB21D2Q8IYB1 491 aaPredicted RBP13.13□□□□□ -0.31
SIL1-208ENST00000505945 ZNF654Q8IZM8 581 aa13.13□□□□□ -0.31
SIL1-208ENST00000505945 HLA-CQ95604 372 aa13.13□□□□□ -0.31
SIL1-208ENST00000505945 USP26Q9BXU7 913 aa13.13□□□□□ -0.31
SIL1-208ENST00000505945 OSBPL7Q9BZF2 842 aa13.13□□□□□ -0.31
SIL1-208ENST00000505945 LY9Q9HBG7 655 aa13.13□□□□□ -0.31
SIL1-208ENST00000505945 SETD4Q9NVD3 440 aa13.13□□□□□ -0.31
SIL1-208ENST00000505945 COG5Q9UP83 839 aa13.13□□□□□ -0.31
SIL1-208ENST00000505945 RBM8AQ9Y5S9 174 aaKnown RBP13.13□□□□□ -0.31
SIL1-208ENST00000505945 FRMPD4Q14CM0 1322 aa13.13□□□□□ -0.31
SIL1-208ENST00000505945 EMSYQ7Z589 1322 aa13.13□□□□□ -0.31
SIL1-208ENST00000505945 FIBPO43427 364 aa13.12□□□□□ -0.31
SIL1-208ENST00000505945 STAM2O75886 525 aa13.12□□□□□ -0.31
SIL1-208ENST00000505945 HOXC8P31273 242 aa13.12□□□□□ -0.31
SIL1-208ENST00000505945 NEDD9Q14511 834 aa13.12□□□□□ -0.31
SIL1-208ENST00000505945 UTP14CQ5TAP6 766 aaKnown RBP13.12□□□□□ -0.31
SIL1-208ENST00000505945 METTL7BQ6UX53 244 aa13.12□□□□□ -0.31
SIL1-208ENST00000505945 TRIM50Q86XT4 487 aa13.12□□□□□ -0.31
SIL1-208ENST00000505945 MYOCDQ8IZQ8 938 aa13.12□□□□□ -0.31
SIL1-208ENST00000505945 CTCFLQ8NI51 663 aaPredicted RBP13.12□□□□□ -0.31
SIL1-208ENST00000505945 SMARCC2Q8TAQ2 1214 aa13.12□□□□□ -0.31
SIL1-208ENST00000505945 RRP36Q96EU6 259 aaKnown RBP13.12□□□□□ -0.31
SIL1-208ENST00000505945 TGS1Q96RS0 853 aaKnown RBP13.12□□□□□ -0.31
SIL1-208ENST00000505945 GPR20Q99678 358 aa13.12□□□□□ -0.31
SIL1-208ENST00000505945 RAPGEFL1Q9UHV5 662 aa13.12□□□□□ -0.31
SIL1-208ENST00000505945 INSL6Q9Y581 213 aa13.12□□□□□ -0.31
SIL1-208ENST00000505945 DOCK5Q9H7D0 1870 aa13.11□□□□□ -0.31
SIL1-208ENST00000505945 MEIS2O14770 477 aa13.11□□□□□ -0.31
SIL1-208ENST00000505945 PRC1O43663 620 aa13.11□□□□□ -0.31
SIL1-208ENST00000505945 AMHP03971 560 aa13.11□□□□□ -0.31
SIL1-208ENST00000505945 CTSHP09668 335 aa13.11□□□□□ -0.31
SIL1-208ENST00000505945 KIF5BP33176 963 aa13.11□□□□□ -0.31
SIL1-208ENST00000505945 SP4Q02446 784 aa13.11□□□□□ -0.31
SIL1-208ENST00000505945 MKRN4PQ13434 485 aaPredicted RBP13.11□□□□□ -0.31
SIL1-208ENST00000505945 COL9A3Q14050 684 aaPredicted RBP13.11□□□□□ -0.31
SIL1-208ENST00000505945 PLEKHG4Q58EX7 1191 aa13.11□□□□□ -0.31
SIL1-208ENST00000505945 PCNX4Q63HM2 1172 aa13.11□□□□□ -0.31
SIL1-208ENST00000505945 CASC1Q6TDU7 716 aa13.11□□□□□ -0.31
SIL1-208ENST00000505945 CMTR1Q8N1G2 835 aaKnown RBP13.11□□□□□ -0.31
SIL1-208ENST00000505945 CUL5Q93034 780 aa13.11□□□□□ -0.31
SIL1-208ENST00000505945 MAP3K14Q99558 947 aa13.11□□□□□ -0.31
SIL1-208ENST00000505945 C17orf80Q9BSJ5 609 aa13.11□□□□□ -0.31
SIL1-208ENST00000505945 SPZ1Q9BXG8 430 aa13.11□□□□□ -0.31
SIL1-208ENST00000505945 LMCD1Q9NZU5 365 aa13.11□□□□□ -0.31
SIL1-208ENST00000505945 COL4A4P53420 1690 aaPredicted RBP13.1□□□□□ -0.31
SIL1-208ENST00000505945 DDAH1O94760 285 aa13.1□□□□□ -0.31
SIL1-208ENST00000505945 PLEKHA8P1O95397 391 aa13.1□□□□□ -0.31
SIL1-208ENST00000505945 GNAT1P11488 350 aa13.1□□□□□ -0.31
SIL1-208ENST00000505945 RXRAP19793 462 aa13.1□□□□□ -0.31
SIL1-208ENST00000505945 SMARCA1P28370 1054 aa13.1□□□□□ -0.31
SIL1-208ENST00000505945 NFXL1Q6ZNB6 911 aa13.1□□□□□ -0.31
SIL1-208ENST00000505945 SRBD1Q8N5C6 995 aaKnown RBP13.1□□□□□ -0.31
SIL1-208ENST00000505945 SEPT8Q92599 483 aa13.1□□□□□ -0.31
SIL1-208ENST00000505945 SEC63Q9UGP8 760 aaKnown RBP13.1□□□□□ -0.31
SIL1-208ENST00000505945 hCG_1642624A0A1W2PR95 340 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 CCDC69A6NI79 296 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 PIK3CDO00329 1044 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 ATP9AO75110 1047 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 UPP2O95045 317 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 MCM5P33992 734 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 GNAQP50148 359 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 ADAM17P78536 824 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 HTRA4P83105 476 aaPredicted RBP13.09□□□□□ -0.31
SIL1-208ENST00000505945 ARHGAP4P98171 946 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 XRRA1Q6P2D8 792 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 MICAL3Q7RTP6 2002 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 NLRX1Q86UT6 975 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 RAB11FIP4Q86YS3 637 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 TMTC2Q8N394 836 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 CCDC82Q8N4S0 544 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 FBXO22Q8NEZ5 403 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 SENP7Q9BQF6 1050 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 LZTS2Q9BRK4 669 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 PSTPIP2Q9H939 334 aa13.09□□□□□ -0.31
SIL1-208ENST00000505945 ZNF215Q9UL58 517 aaPredicted RBP13.09□□□□□ -0.31
SIL1-208ENST00000505945 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.08□□□□□ -0.32
SIL1-208ENST00000505945 SH2B2O14492 632 aaPredicted RBP13.08□□□□□ -0.32
SIL1-208ENST00000505945 CAND2O75155 1236 aa13.08□□□□□ -0.32
SIL1-208ENST00000505945 TCF7P36402 384 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms