RNA–Protein interactions for RNA: ENST00000505672.5

CCND3-208, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 932 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-208ENST00000505672 CALM2P0DP24 149 aa20.75■□□□□ 0.91
CCND3-208ENST00000505672 CALM3P0DP25 149 aa20.75■□□□□ 0.91
CCND3-208ENST00000505672 KCNJ6P48051 423 aa20.75■□□□□ 0.91
CCND3-208ENST00000505672 PTK7Q13308 1070 aa20.75■□□□□ 0.91
CCND3-208ENST00000505672 PGM5Q15124 567 aa20.75■□□□□ 0.91
CCND3-208ENST00000505672 SKIV2LQ15477 1246 aaKnown RBP20.75■□□□□ 0.91
CCND3-208ENST00000505672 CNKSR3Q6P9H4 555 aa20.75■□□□□ 0.91
CCND3-208ENST00000505672 SRBD1Q8N5C6 995 aaKnown RBP20.75■□□□□ 0.91
CCND3-208ENST00000505672 GPKOWQ92917 476 aaPredicted RBP eCLIP20.75■□□□□ 0.912e-6■■■■□ 20.4
CCND3-208ENST00000505672 LZTS2Q9BRK4 669 aa20.75■□□□□ 0.91
CCND3-208ENST00000505672 BCAS3Q9H6U6 928 aa20.75■□□□□ 0.91
CCND3-208ENST00000505672 SEC63Q9UGP8 760 aaKnown RBP20.75■□□□□ 0.91
CCND3-208ENST00000505672 SLC12A7Q9Y666 1083 aa20.75■□□□□ 0.91
CCND3-208ENST00000505672 PPFIA4O75335 1185 aa20.74■□□□□ 0.91
CCND3-208ENST00000505672 SMARCA1P28370 1054 aa20.74■□□□□ 0.91
CCND3-208ENST00000505672 CELF3Q5SZQ8 465 aaKnown RBP20.74■□□□□ 0.91
CCND3-208ENST00000505672 ZNF618Q5T7W0 954 aa20.74■□□□□ 0.91
CCND3-208ENST00000505672 RASEFQ8IZ41 740 aa20.74■□□□□ 0.91
CCND3-208ENST00000505672 CMTR1Q8N1G2 835 aaKnown RBP20.74■□□□□ 0.91
CCND3-208ENST00000505672 NEK1Q96PY6 1258 aa20.74■□□□□ 0.91
CCND3-208ENST00000505672 GJB5O95377 273 aa20.73■□□□□ 0.91
CCND3-208ENST00000505672 PARNO95453 639 aaKnown RBP20.73■□□□□ 0.91
CCND3-208ENST00000505672 CCND2P30279 289 aa20.73■□□□□ 0.91
CCND3-208ENST00000505672 SGMS1Q86VZ5 419 aa20.73■□□□□ 0.91
CCND3-208ENST00000505672 MICU3Q86XE3 530 aa20.73■□□□□ 0.91
CCND3-208ENST00000505672 IL27Q8NEV9 243 aa20.73■□□□□ 0.91
CCND3-208ENST00000505672 TCEANC2Q96MN5 208 aa20.73■□□□□ 0.91
CCND3-208ENST00000505672 C16orf70Q9BSU1 422 aa20.73■□□□□ 0.91
CCND3-208ENST00000505672 KATNAL1Q9BW62 490 aa20.73■□□□□ 0.91
CCND3-208ENST00000505672 ABHD14A-ACY1A0A1B0GW23 586 aa20.72■□□□□ 0.91
CCND3-208ENST00000505672 GGPS1O95749 300 aa20.72■□□□□ 0.91
CCND3-208ENST00000505672 NEFLP07196 543 aa20.72■□□□□ 0.91
CCND3-208ENST00000505672 MKRN4PQ13434 485 aaPredicted RBP20.72■□□□□ 0.91
CCND3-208ENST00000505672 AAK1Q2M2I8 961 aa20.72■□□□□ 0.91
CCND3-208ENST00000505672 ADCK5Q3MIX3 580 aa20.72■□□□□ 0.91
CCND3-208ENST00000505672 SPATA33Q96N06 139 aa20.72■□□□□ 0.91
CCND3-208ENST00000505672 KAT6AQ92794 2004 aa20.71■□□□□ 0.91
CCND3-208ENST00000505672 UBA1P22314 1058 aaKnown RBP20.71■□□□□ 0.91
CCND3-208ENST00000505672 TSGA10IPQ3SY00 556 aa20.71■□□□□ 0.91
CCND3-208ENST00000505672 KCNV1Q6PIU1 500 aa20.71■□□□□ 0.91
CCND3-208ENST00000505672 SYNE3Q6ZMZ3 975 aa20.71■□□□□ 0.91
CCND3-208ENST00000505672 TMTC3Q6ZXV5 915 aa20.71■□□□□ 0.91
CCND3-208ENST00000505672 DHX32Q7L7V1 743 aaKnown RBP20.71■□□□□ 0.91
CCND3-208ENST00000505672 CCDC82Q8N4S0 544 aa20.71■□□□□ 0.91
CCND3-208ENST00000505672 FANCBQ8NB91 859 aa20.71■□□□□ 0.91
CCND3-208ENST00000505672 RAD9AQ99638 391 aa20.71■□□□□ 0.91
CCND3-208ENST00000505672 ZBED2Q9BTP6 218 aa20.71■□□□□ 0.91
CCND3-208ENST00000505672 SUGCTQ9HAC7 445 aa20.71■□□□□ 0.91
CCND3-208ENST00000505672 COG5Q9UP83 839 aa20.71■□□□□ 0.91
CCND3-208ENST00000505672 FRMPD4Q14CM0 1322 aa20.71■□□□□ 0.91
CCND3-208ENST00000505672 COL4A4P53420 1690 aaPredicted RBP20.7■□□□□ 0.91
CCND3-208ENST00000505672 hCG_1642624A0A1W2PR95 340 aa20.7■□□□□ 0.9
CCND3-208ENST00000505672 EXOSC10Q01780 885 aaKnown RBP20.7■□□□□ 0.9
CCND3-208ENST00000505672 KRT32Q14532 448 aa20.7■□□□□ 0.9
CCND3-208ENST00000505672 APOA5Q6Q788 366 aa20.7■□□□□ 0.9
CCND3-208ENST00000505672 USP17L6PQ6QN14 398 aa20.7■□□□□ 0.9
CCND3-208ENST00000505672 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.7■□□□□ 0.9
CCND3-208ENST00000505672 SMARCC2Q8TAQ2 1214 aa20.7■□□□□ 0.9
CCND3-208ENST00000505672 GDPD5Q8WTR4 605 aa20.7■□□□□ 0.9
CCND3-208ENST00000505672 CUL5Q93034 780 aa20.7■□□□□ 0.9
CCND3-208ENST00000505672 OSBPL7Q9BZF2 842 aa20.7■□□□□ 0.9
CCND3-208ENST00000505672 LINC01553A4QN01 128 aa20.69■□□□□ 0.9
CCND3-208ENST00000505672 TGFB3P10600 412 aa20.69■□□□□ 0.9
CCND3-208ENST00000505672 HOXC8P31273 242 aa20.69■□□□□ 0.9
CCND3-208ENST00000505672 ERVK-21P61565 698 aa20.69■□□□□ 0.9
CCND3-208ENST00000505672 MRPS9P82933 396 aaKnown RBP20.69■□□□□ 0.9
CCND3-208ENST00000505672 IKBKEQ14164 716 aa20.69■□□□□ 0.9
CCND3-208ENST00000505672 SERINC5Q86VE9 423 aa20.69■□□□□ 0.9
CCND3-208ENST00000505672 HLA-CQ95604 372 aa20.69■□□□□ 0.9
CCND3-208ENST00000505672 MTUS1Q9ULD2 1270 aa20.69■□□□□ 0.9
CCND3-208ENST00000505672 LGR5O75473 907 aa20.68■□□□□ 0.9
CCND3-208ENST00000505672 FAM117BQ6P1L5 589 aa20.68■□□□□ 0.9
CCND3-208ENST00000505672 DBF4BQ8NFT6 615 aa20.68■□□□□ 0.9
CCND3-208ENST00000505672 LMCD1Q9NZU5 365 aa20.68■□□□□ 0.9
CCND3-208ENST00000505672 TELO2Q9Y4R8 837 aa20.68■□□□□ 0.9
CCND3-208ENST00000505672 BRWD1Q9NSI6 2320 aa20.68■□□□□ 0.9
CCND3-208ENST00000505672 PIK3CDO00329 1044 aa20.67■□□□□ 0.9
CCND3-208ENST00000505672 MEIS2O14770 477 aa20.67■□□□□ 0.9
CCND3-208ENST00000505672 ZBTB43O43298 467 aa20.67■□□□□ 0.9
CCND3-208ENST00000505672 THPOP40225 353 aa20.67■□□□□ 0.9
CCND3-208ENST00000505672 SEMA3FQ13275 785 aa20.67■□□□□ 0.9
CCND3-208ENST00000505672 GNPTABQ3T906 1256 aa20.67■□□□□ 0.9
CCND3-208ENST00000505672 TGS1Q96RS0 853 aaKnown RBP20.67■□□□□ 0.9
CCND3-208ENST00000505672 RNPEPQ9H4A4 650 aa20.67■□□□□ 0.9
CCND3-208ENST00000505672 MLXIPQ9HAP2 919 aa20.67■□□□□ 0.9
CCND3-208ENST00000505672 RBM28Q9NW13 759 aaKnown RBP20.67■□□□□ 0.9
CCND3-208ENST00000505672 BRPF3Q9ULD4 1205 aa20.67■□□□□ 0.9
CCND3-208ENST00000505672 CNTNAP5Q8WYK1 1306 aa20.67■□□□□ 0.9
CCND3-208ENST00000505672 RSPH10B2B2RC85 870 aa20.66■□□□□ 0.9
CCND3-208ENST00000505672 H3BRB1 525 aa20.66■□□□□ 0.9
CCND3-208ENST00000505672 TREHO43280 583 aa20.66■□□□□ 0.9
CCND3-208ENST00000505672 EFCAB14O75071 495 aa20.66■□□□□ 0.9
CCND3-208ENST00000505672 STAM2O75886 525 aa20.66■□□□□ 0.9
CCND3-208ENST00000505672 LGALS2P05162 132 aa20.66■□□□□ 0.9
CCND3-208ENST00000505672 HMGB1P09429 215 aaKnown RBP20.66■□□□□ 0.9
CCND3-208ENST00000505672 RSPH10BP0C881 870 aa20.66■□□□□ 0.9
CCND3-208ENST00000505672 RTN1Q16799 776 aa20.66■□□□□ 0.9
CCND3-208ENST00000505672 HEATR3Q7Z4Q2 680 aa20.66■□□□□ 0.9
CCND3-208ENST00000505672 ATP6V0A1Q93050 837 aa20.66■□□□□ 0.9
CCND3-208ENST00000505672 EPHX3Q9H6B9 360 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms