RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 TSPAN4O14817 238 aa11.18□□□□□ -0.62
ITGA1-203ENST00000504669 ZCCHC18P0CG32 403 aa11.18□□□□□ -0.62
ITGA1-203ENST00000504669 NPR1P16066 1061 aa11.18□□□□□ -0.62
ITGA1-203ENST00000504669 KRT17Q04695 432 aa11.18□□□□□ -0.62
ITGA1-203ENST00000504669 RASGRF1Q13972 1273 aa11.18□□□□□ -0.62
ITGA1-203ENST00000504669 DSTYKQ6XUX3 929 aa11.18□□□□□ -0.62
ITGA1-203ENST00000504669 KRT27Q7Z3Y8 459 aa11.18□□□□□ -0.62
ITGA1-203ENST00000504669 U2AF1L4Q8WU68 220 aaKnown RBP11.18□□□□□ -0.62
ITGA1-203ENST00000504669 C16orf96A6NNT2 1141 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 ZNF213O14771 459 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 CTIFO43310 598 aaKnown RBP11.17□□□□□ -0.62
ITGA1-203ENST00000504669 NQO1P15559 274 aaKnown RBP11.17□□□□□ -0.62
ITGA1-203ENST00000504669 DDX5P17844 614 aaKnown RBP11.17□□□□□ -0.62
ITGA1-203ENST00000504669 P3H1Q32P28 736 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 CNDP1Q96KN2 507 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 CBFA2T3O75081 653 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 ATP6V1B1P15313 513 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 PPP1R2P41236 205 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 SPARCL1Q14515 664 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 FRA10AC1Q70Z53 315 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 PRPF18Q99633 342 aaKnown RBP11.17□□□□□ -0.62
ITGA1-203ENST00000504669 DDX18Q9NVP1 670 aaKnown RBP11.17□□□□□ -0.62
ITGA1-203ENST00000504669 C15orf41Q9Y2V0 281 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 ANKRD30BQ9BXX2 1392 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 CNOT3O75175 753 aaKnown RBP11.17□□□□□ -0.62
ITGA1-203ENST00000504669 PDAP1Q13442 181 aaKnown RBP11.17□□□□□ -0.62
ITGA1-203ENST00000504669 NEK5Q6P3R8 708 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 USP28Q96RU2 1077 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 CCDC134Q9H6E4 229 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 NFIBO00712 420 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 HSPA13P48723 471 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 PPP6R3Q5H9R7 873 aaPredicted RBP11.17□□□□□ -0.62
ITGA1-203ENST00000504669 ZBTB8BQ8NAP8 495 aaPredicted RBP11.17□□□□□ -0.62
ITGA1-203ENST00000504669 C19orf60Q96EN9 201 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 ADNPQ9H2P0 1102 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 NFU1Q9UMS0 254 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 LIN7AO14910 233 aaPredicted RBP11.17□□□□□ -0.62
ITGA1-203ENST00000504669 ZBTB39O15060 712 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 RFC5P40937 340 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 LRRC36Q1X8D7 754 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 KCTD4Q8WVF5 259 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 CYFIP2Q96F07 1278 aa11.17□□□□□ -0.62
ITGA1-203ENST00000504669 MRPL39Q9NYK5 338 aaKnown RBP11.17□□□□□ -0.62
ITGA1-203ENST00000504669 CCDC59Q9P031 241 aaKnown RBP11.17□□□□□ -0.62
ITGA1-203ENST00000504669 SOGA1O94964 1423 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 BFSP2Q13515 415 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 PRMT1Q99873 361 aaKnown RBP11.16□□□□□ -0.62
ITGA1-203ENST00000504669 PAIP1Q9H074 479 aaKnown RBP11.16□□□□□ -0.62
ITGA1-203ENST00000504669 SCRIBQ14160 1630 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 RBM47A0AV96 593 aaKnown RBP11.16□□□□□ -0.62
ITGA1-203ENST00000504669 PLS3P13797 630 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 MYL6BP14649 208 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 CHKAP35790 457 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 SCNN1BP51168 640 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 B3GNT6Q6ZMB0 384 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 GALNT4Q8N4A0 578 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 VIPAS39Q9H9C1 493 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 RIC8AQ9NPQ8 531 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 C8orf4Q9NR00 106 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 PPARGC1AQ9UBK2 798 aaKnown RBP11.16□□□□□ -0.62
ITGA1-203ENST00000504669 CORO1CQ9ULV4 474 aaPredicted RBP11.16□□□□□ -0.62
ITGA1-203ENST00000504669 TTI1O43156 1089 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 MYL1P05976 194 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 PSEN1P49768 467 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 ADAM17P78536 824 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 PPIDQ08752 370 aaKnown RBP11.16□□□□□ -0.62
ITGA1-203ENST00000504669 PODNQ7Z5L7 613 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 ZNF579Q8NAF0 562 aaKnown RBP11.16□□□□□ -0.62
ITGA1-203ENST00000504669 NEK9Q8TD19 979 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 GRAMD1AQ96CP6 724 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 FAM153AQ9UHL3 310 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 ERBB3P21860 1342 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 KLHL33A6NCF5 533 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 GARSP41250 739 aaKnown RBP11.16□□□□□ -0.62
ITGA1-203ENST00000504669 YWHAEP62258 255 aaKnown RBP11.16□□□□□ -0.62
ITGA1-203ENST00000504669 EFR3AQ14156 821 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 PPP4R3AQ6IN85 833 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 MICALL2Q8IY33 904 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 TRMT44Q8IYL2 757 aaKnown RBP11.16□□□□□ -0.62
ITGA1-203ENST00000504669 ZNF428Q96B54 188 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 PHF21AQ96BD5 680 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 ZCWPW1Q9H0M4 648 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 HDAC6Q9UBN7 1215 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 NFE2L3Q9Y4A8 694 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 CCT8L1PA6NM43 557 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 IFIT3O14879 490 aaKnown RBP11.16□□□□□ -0.62
ITGA1-203ENST00000504669 HIC1Q14526 733 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 RETREG2Q8NC44 543 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 NELFBQ8WX92 580 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 KLC2Q9H0B6 622 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 DHX36Q9H2U1 1008 aaKnown RBP11.16□□□□□ -0.62
ITGA1-203ENST00000504669 UBN1Q9NPG3 1134 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 MAP3K20Q9NYL2 800 aaKnown RBP11.16□□□□□ -0.62
ITGA1-203ENST00000504669 GGT7Q9UJ14 662 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 AFG3L2Q9Y4W6 797 aa11.16□□□□□ -0.62
ITGA1-203ENST00000504669 RB1CC1Q8TDY2 1594 aa11.15□□□□□ -0.62
ITGA1-203ENST00000504669 CENPUQ71F23 418 aa11.15□□□□□ -0.62
ITGA1-203ENST00000504669 TRPM8Q7Z2W7 1104 aa11.15□□□□□ -0.62
ITGA1-203ENST00000504669 LCMT1Q9UIC8 334 aa11.15□□□□□ -0.62
ITGA1-203ENST00000504669 A0A1W2PRG6 482 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms