RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 C16orf70Q9BSU1 422 aa12.73□□□□□ -0.37
LSAMP-206ENST00000498645 SPZ1Q9BXG8 430 aa12.73□□□□□ -0.37
LSAMP-206ENST00000498645 LRRC2Q9BYS8 371 aa12.73□□□□□ -0.37
LSAMP-206ENST00000498645 TUT1Q9H6E5 874 aaKnown RBP12.73□□□□□ -0.37
LSAMP-206ENST00000498645 ANO2Q9NQ90 1003 aa12.73□□□□□ -0.37
LSAMP-206ENST00000498645 MTUS1Q9ULD2 1270 aa12.73□□□□□ -0.37
LSAMP-206ENST00000498645 FRMPD4Q14CM0 1322 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 BDP1A6H8Y1 2624 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 hCG_1642624A0A1W2PR95 340 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 TNFRSF10AO00220 468 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 SH2B2O14492 632 aaPredicted RBP12.72□□□□□ -0.37
LSAMP-206ENST00000498645 SLC27A2O14975 620 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 FIBPO43427 364 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 CXCL10P02778 98 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 SMIM10L2AP0DMW4 78 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 SMIM10L2BP0DMW5 78 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 SEMA3FQ13275 785 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 COL9A3Q14050 684 aaPredicted RBP12.72□□□□□ -0.37
LSAMP-206ENST00000498645 IKBKEQ14164 716 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 NEDD9Q14511 834 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 MBTPS1Q14703 1052 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 UTP14CQ5TAP6 766 aaKnown RBP12.72□□□□□ -0.37
LSAMP-206ENST00000498645 SERINC5Q86VE9 423 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 SKAP1Q86WV1 359 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 TRIM50Q86XT4 487 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 CCDC82Q8N4S0 544 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 INPP4AQ96PE3 977 aaPredicted RBP12.72□□□□□ -0.37
LSAMP-206ENST00000498645 ESYT1Q9BSJ8 1104 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 LSG1Q9H089 658 aaKnown RBP12.72□□□□□ -0.37
LSAMP-206ENST00000498645 MTCH2Q9Y6C9 303 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 NCOR1O75376 2440 aa12.72□□□□□ -0.37
LSAMP-206ENST00000498645 ABHD14A-ACY1A0A1B0GW23 586 aa12.71□□□□□ -0.37
LSAMP-206ENST00000498645 RSPH10B2B2RC85 870 aa12.71□□□□□ -0.37
LSAMP-206ENST00000498645 SPATA31C2B4DYI2 1134 aa12.71□□□□□ -0.37
LSAMP-206ENST00000498645 STAM2O75886 525 aa12.71□□□□□ -0.37
LSAMP-206ENST00000498645 CTSHP09668 335 aa12.71□□□□□ -0.37
LSAMP-206ENST00000498645 RSPH10BP0C881 870 aa12.71□□□□□ -0.37
LSAMP-206ENST00000498645 GNAQP50148 359 aa12.71□□□□□ -0.37
LSAMP-206ENST00000498645 TFF2Q03403 129 aa12.71□□□□□ -0.37
LSAMP-206ENST00000498645 CREB3L3Q68CJ9 461 aa12.71□□□□□ -0.37
LSAMP-206ENST00000498645 TRAF7Q6Q0C0 670 aa12.71□□□□□ -0.37
LSAMP-206ENST00000498645 METTL7BQ6UX53 244 aa12.71□□□□□ -0.37
LSAMP-206ENST00000498645 SRBD1Q8N5C6 995 aaKnown RBP12.71□□□□□ -0.37
LSAMP-206ENST00000498645 GDPD5Q8WTR4 605 aa12.71□□□□□ -0.37
LSAMP-206ENST00000498645 TMEM87BQ96K49 555 aa12.71□□□□□ -0.37
LSAMP-206ENST00000498645 MAP3K14Q99558 947 aa12.71□□□□□ -0.37
LSAMP-206ENST00000498645 GPR20Q99678 358 aa12.71□□□□□ -0.37
LSAMP-206ENST00000498645 LZTS2Q9BRK4 669 aa12.71□□□□□ -0.37
LSAMP-206ENST00000498645 TELO2Q9Y4R8 837 aa12.71□□□□□ -0.37
LSAMP-206ENST00000498645 SLC12A7Q9Y666 1083 aa12.71□□□□□ -0.37
LSAMP-206ENST00000498645 SIP14410 1827 aa12.71□□□□□ -0.38
LSAMP-206ENST00000498645 XIRP2A4UGR9 3374 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 EMSYQ7Z589 1322 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 MEIS2O14770 477 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 TREHO43280 583 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 LGR5O75473 907 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 GJB5O95377 273 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 CALM1P0DP23 149 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 CALM2P0DP24 149 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 CALM3P0DP25 149 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 ICAM3P32942 547 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 GRB10Q13322 594 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 UBE2SQ16763 222 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 PCNX4Q63HM2 1172 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.7□□□□□ -0.38
LSAMP-206ENST00000498645 NLRX1Q86UT6 975 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 MICU3Q86XE3 530 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 MYOCDQ8IZQ8 938 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 TMTC2Q8N394 836 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 UHRF1Q96T88 793 aaPredicted RBP12.7□□□□□ -0.38
LSAMP-206ENST00000498645 USP26Q9BXU7 913 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 PSTPIP2Q9H939 334 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 SETD4Q9NVD3 440 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 PKD2L1Q9P0L9 805 aa12.7□□□□□ -0.38
LSAMP-206ENST00000498645 ZNF215Q9UL58 517 aaPredicted RBP12.7□□□□□ -0.38
LSAMP-206ENST00000498645 MUC3AQ02505 3323 aa12.69□□□□□ -0.38
LSAMP-206ENST00000498645 PIK3CDO00329 1044 aa12.69□□□□□ -0.38
LSAMP-206ENST00000498645 EFCAB14O75071 495 aa12.69□□□□□ -0.38
LSAMP-206ENST00000498645 AMHP03971 560 aa12.69□□□□□ -0.38
LSAMP-206ENST00000498645 SMARCA1P28370 1054 aa12.69□□□□□ -0.38
LSAMP-206ENST00000498645 KCNQ1P51787 676 aa12.69□□□□□ -0.38
LSAMP-206ENST00000498645 ARHGAP4P98171 946 aa12.69□□□□□ -0.38
LSAMP-206ENST00000498645 HEATR3Q7Z4Q2 680 aa12.69□□□□□ -0.38
LSAMP-206ENST00000498645 DBF4BQ8NFT6 615 aa12.69□□□□□ -0.38
LSAMP-206ENST00000498645 RAD9AQ99638 391 aa12.69□□□□□ -0.38
LSAMP-206ENST00000498645 MTA3Q9BTC8 594 aa12.69□□□□□ -0.38
LSAMP-206ENST00000498645 RNPEPQ9H4A4 650 aa12.69□□□□□ -0.38
LSAMP-206ENST00000498645 SPDYE3A6NKU9 549 aa12.68□□□□□ -0.38
LSAMP-206ENST00000498645 GNAT1P11488 350 aa12.68□□□□□ -0.38
LSAMP-206ENST00000498645 LIFRP42702 1097 aa12.68□□□□□ -0.38
LSAMP-206ENST00000498645 NECTIN1Q15223 517 aa12.68□□□□□ -0.38
LSAMP-206ENST00000498645 AAK1Q2M2I8 961 aa12.68□□□□□ -0.38
LSAMP-206ENST00000498645 XRRA1Q6P2D8 792 aa12.68□□□□□ -0.38
LSAMP-206ENST00000498645 SYNE3Q6ZMZ3 975 aa12.68□□□□□ -0.38
LSAMP-206ENST00000498645 TMTC3Q6ZXV5 915 aa12.68□□□□□ -0.38
LSAMP-206ENST00000498645 FANCBQ8NB91 859 aa12.68□□□□□ -0.38
LSAMP-206ENST00000498645 LMBR1Q8WVP7 490 aa12.68□□□□□ -0.38
LSAMP-206ENST00000498645 TCEANC2Q96MN5 208 aa12.68□□□□□ -0.38
LSAMP-206ENST00000498645 NECAB3Q96P71 396 aaPredicted RBP12.68□□□□□ -0.38
LSAMP-206ENST00000498645 TGS1Q96RS0 853 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms