RNA–Protein interactions for RNA: ENST00000498535.1

MKRN1-216, Transcript of makorin ring finger protein 1, humanhuman

TSL 2

Gene MKRN1, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-216ENST00000498535 SPRED2Q7Z698 418 aa29.26■■■□□ 2.27
MKRN1-216ENST00000498535 SMARCC2Q8TAQ2 1214 aa29.26■■■□□ 2.27
MKRN1-216ENST00000498535 MAP4K1Q92918 833 aa29.26■■■□□ 2.27
MKRN1-216ENST00000498535 INPP4AQ96PE3 977 aaPredicted RBP29.26■■■□□ 2.27
MKRN1-216ENST00000498535 TGS1Q96RS0 853 aaKnown RBP29.26■■■□□ 2.27
MKRN1-216ENST00000498535 MAP3K14Q99558 947 aa29.26■■■□□ 2.27
MKRN1-216ENST00000498535 FRMPD4Q14CM0 1322 aa29.25■■■□□ 2.27
MKRN1-216ENST00000498535 SMIM10L2AP0DMW4 78 aa29.25■■■□□ 2.27
MKRN1-216ENST00000498535 SMIM10L2BP0DMW5 78 aa29.25■■■□□ 2.27
MKRN1-216ENST00000498535 KCNQ1P51787 676 aa29.25■■■□□ 2.27
MKRN1-216ENST00000498535 ANTXR2P58335 489 aa29.25■■■□□ 2.27
MKRN1-216ENST00000498535 CASC1Q6TDU7 716 aa29.25■■■□□ 2.27
MKRN1-216ENST00000498535 METTL7BQ6UX53 244 aa29.25■■■□□ 2.27
MKRN1-216ENST00000498535 CYFIP1Q7L576 1253 aa29.25■■■□□ 2.27
MKRN1-216ENST00000498535 MB21D2Q8IYB1 491 aaPredicted RBP29.25■■■□□ 2.27
MKRN1-216ENST00000498535 HLA-CQ95604 372 aa29.25■■■□□ 2.27
MKRN1-216ENST00000498535 SPZ1Q9BXG8 430 aa29.25■■■□□ 2.27
MKRN1-216ENST00000498535 BCAS3Q9H6U6 928 aa29.25■■■□□ 2.27
MKRN1-216ENST00000498535 RTEL1Q9NZ71 1219 aa29.25■■■□□ 2.27
MKRN1-216ENST00000498535 LMCD1Q9NZU5 365 aa29.25■■■□□ 2.27
MKRN1-216ENST00000498535 SEC63Q9UGP8 760 aaKnown RBP29.25■■■□□ 2.27
MKRN1-216ENST00000498535 MTUS1Q9ULD2 1270 aa29.25■■■□□ 2.27
MKRN1-216ENST00000498535 RBM8AQ9Y5S9 174 aaKnown RBP29.25■■■□□ 2.27
MKRN1-216ENST00000498535 SPATA31C2B4DYI2 1134 aa29.24■■■□□ 2.27
MKRN1-216ENST00000498535 FIBPO43427 364 aa29.24■■■□□ 2.27
MKRN1-216ENST00000498535 LPXNO60711 386 aa29.24■■■□□ 2.27
MKRN1-216ENST00000498535 AMHP03971 560 aa29.24■■■□□ 2.27
MKRN1-216ENST00000498535 GNAT1P11488 350 aa29.24■■■□□ 2.27
MKRN1-216ENST00000498535 ZNF654Q8IZM8 581 aa29.24■■■□□ 2.27
MKRN1-216ENST00000498535 DBF4BQ8NFT6 615 aa29.24■■■□□ 2.27
MKRN1-216ENST00000498535 DDAH1O94760 285 aa29.23■■■□□ 2.27
MKRN1-216ENST00000498535 GDPD5Q8WTR4 605 aa29.23■■■□□ 2.27
MKRN1-216ENST00000498535 NECAB3Q96P71 396 aaPredicted RBP29.23■■■□□ 2.27
MKRN1-216ENST00000498535 LZTS2Q9BRK4 669 aa29.23■■■□□ 2.27
MKRN1-216ENST00000498535 RNPEPQ9H4A4 650 aa29.23■■■□□ 2.27
MKRN1-216ENST00000498535 LY9Q9HBG7 655 aa29.23■■■□□ 2.27
MKRN1-216ENST00000498535 INSL6Q9Y581 213 aa29.23■■■□□ 2.27
MKRN1-216ENST00000498535 LINC01553A4QN01 128 aa29.22■■■□□ 2.27
MKRN1-216ENST00000498535 TREHO43280 583 aa29.22■■■□□ 2.27
MKRN1-216ENST00000498535 SMARCA1P28370 1054 aa29.22■■■□□ 2.27
MKRN1-216ENST00000498535 GNAQP50148 359 aa29.22■■■□□ 2.27
MKRN1-216ENST00000498535 ERVK-21P61565 698 aa29.22■■■□□ 2.27
MKRN1-216ENST00000498535 XRRA1Q6P2D8 792 aa29.22■■■□□ 2.27
MKRN1-216ENST00000498535 USP17L6PQ6QN14 398 aa29.22■■■□□ 2.27
MKRN1-216ENST00000498535 NFXL1Q6ZNB6 911 aa29.22■■■□□ 2.27
MKRN1-216ENST00000498535 TMTC2Q8N394 836 aa29.22■■■□□ 2.27
MKRN1-216ENST00000498535 MYL10Q9BUA6 226 aa29.22■■■□□ 2.27
MKRN1-216ENST00000498535 ZNF215Q9UL58 517 aaPredicted RBP29.22■■■□□ 2.27
MKRN1-216ENST00000498535 CAND2O75155 1236 aa29.21■■■□□ 2.27
MKRN1-216ENST00000498535 COL9A1P20849 921 aa29.21■■■□□ 2.27
MKRN1-216ENST00000498535 HOXC8P31273 242 aa29.21■■■□□ 2.27
MKRN1-216ENST00000498535 PCNX4Q63HM2 1172 aa29.21■■■□□ 2.27
MKRN1-216ENST00000498535 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.21■■■□□ 2.279e-8■■□□□ 11.7
MKRN1-216ENST00000498535 MYOCDQ8IZQ8 938 aa29.21■■■□□ 2.27
MKRN1-216ENST00000498535 GPR20Q99678 358 aa29.21■■■□□ 2.27
MKRN1-216ENST00000498535 MTA3Q9BTC8 594 aa29.21■■■□□ 2.27
MKRN1-216ENST00000498535 PRC1O43663 620 aa29.2■■■□□ 2.26
MKRN1-216ENST00000498535 SEMA3FQ13275 785 aa29.2■■■□□ 2.26
MKRN1-216ENST00000498535 PLEKHG4Q58EX7 1191 aa29.2■■■□□ 2.26
MKRN1-216ENST00000498535 NLRX1Q86UT6 975 aa29.2■■■□□ 2.26
MKRN1-216ENST00000498535 SEPT8Q92599 483 aa29.2■■■□□ 2.26
MKRN1-216ENST00000498535 SENP7Q9BQF6 1050 aa29.2■■■□□ 2.26
MKRN1-216ENST00000498535 SUGCTQ9HAC7 445 aa29.2■■■□□ 2.26
MKRN1-216ENST00000498535 SETD4Q9NVD3 440 aa29.2■■■□□ 2.26
MKRN1-216ENST00000498535 COL4A4P53420 1690 aaPredicted RBP29.19■■■□□ 2.26
MKRN1-216ENST00000498535 CCDC69A6NI79 296 aa29.19■■■□□ 2.26
MKRN1-216ENST00000498535 PIK3CDO00329 1044 aa29.19■■■□□ 2.26
MKRN1-216ENST00000498535 MCM5P33992 734 aa29.19■■■□□ 2.26
MKRN1-216ENST00000498535 IRX6P78412 446 aaPredicted RBP29.19■■■□□ 2.26
MKRN1-216ENST00000498535 UTP14CQ5TAP6 766 aaKnown RBP29.19■■■□□ 2.26
MKRN1-216ENST00000498535 GIMAP8Q8ND71 665 aaPredicted RBP29.19■■■□□ 2.26
MKRN1-216ENST00000498535 MEIS2O14770 477 aa29.18■■■□□ 2.26
MKRN1-216ENST00000498535 SP4Q02446 784 aa29.18■■■□□ 2.26
MKRN1-216ENST00000498535 TMEM87BQ96K49 555 aa29.18■■■□□ 2.26
MKRN1-216ENST00000498535 CTSHP09668 335 aa29.17■■■□□ 2.26
MKRN1-216ENST00000498535 TRIM50Q86XT4 487 aa29.17■■■□□ 2.26
MKRN1-216ENST00000498535 CALM1P0DP23 149 aa29.16■■■□□ 2.26
MKRN1-216ENST00000498535 CALM2P0DP24 149 aa29.16■■■□□ 2.26
MKRN1-216ENST00000498535 CALM3P0DP25 149 aa29.16■■■□□ 2.26
MKRN1-216ENST00000498535 FBXO22Q8NEZ5 403 aa29.16■■■□□ 2.26
MKRN1-216ENST00000498535 PSTPIP2Q9H939 334 aa29.16■■■□□ 2.26
MKRN1-216ENST00000498535 MICAL3Q7RTP6 2002 aa29.16■■■□□ 2.26
MKRN1-216ENST00000498535 BRWD1Q9NSI6 2320 aa29.16■■■□□ 2.26
MKRN1-216ENST00000498535 DOCK5Q9H7D0 1870 aa29.15■■■□□ 2.26
MKRN1-216ENST00000498535 PLEKHA8P1O95397 391 aa29.15■■■□□ 2.26
MKRN1-216ENST00000498535 HTRA4P83105 476 aaPredicted RBP29.15■■■□□ 2.26
MKRN1-216ENST00000498535 ARHGAP4P98171 946 aa29.15■■■□□ 2.26
MKRN1-216ENST00000498535 MKRN4PQ13434 485 aaPredicted RBP29.15■■■□□ 2.26
MKRN1-216ENST00000498535 SRBD1Q8N5C6 995 aaKnown RBP29.15■■■□□ 2.26
MKRN1-216ENST00000498535 CDHR1Q96JP9 859 aa29.15■■■□□ 2.26
MKRN1-216ENST00000498535 RBAK-RBAKDNI3L0D1 243 aa29.14■■■□□ 2.26
MKRN1-216ENST00000498535 SH2B2O14492 632 aaPredicted RBP29.14■■■□□ 2.26
MKRN1-216ENST00000498535 GPRASP2Q96D09 838 aa29.14■■■□□ 2.26
MKRN1-216ENST00000498535 YME1L1Q96TA2 773 aa29.14■■■□□ 2.26
MKRN1-216ENST00000498535 C17orf80Q9BSJ5 609 aa29.14■■■□□ 2.26
MKRN1-216ENST00000498535 SIP14410 1827 aa29.14■■■□□ 2.26
MKRN1-216ENST00000498535 NRCAMQ92823 1304 aa29.14■■■□□ 2.25
MKRN1-216ENST00000498535 CMTR1Q8N1G2 835 aaKnown RBP29.13■■■□□ 2.25
MKRN1-216ENST00000498535 LMBR1Q8WVP7 490 aa29.13■■■□□ 2.25
MKRN1-216ENST00000498535 APBB2Q92870 758 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms