RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 HOXC8P31273 242 aa21.04■□□□□ 0.96
ATPAF2-209ENST00000497871 THPOP40225 353 aa21.04■□□□□ 0.96
ATPAF2-209ENST00000497871 TFF2Q03403 129 aa21.04■□□□□ 0.96
ATPAF2-209ENST00000497871 KRT40Q6A162 431 aa21.04■□□□□ 0.96
ATPAF2-209ENST00000497871 XRRA1Q6P2D8 792 aa21.04■□□□□ 0.96
ATPAF2-209ENST00000497871 ZNF654Q8IZM8 581 aa21.04■□□□□ 0.96
ATPAF2-209ENST00000497871 ATP6V0A1Q93050 837 aa21.04■□□□□ 0.96
ATPAF2-209ENST00000497871 RRP36Q96EU6 259 aaKnown RBP21.04■□□□□ 0.96
ATPAF2-209ENST00000497871 RNPEPQ9H4A4 650 aa21.04■□□□□ 0.96
ATPAF2-209ENST00000497871 LY9Q9HBG7 655 aa21.04■□□□□ 0.96
ATPAF2-209ENST00000497871 RTEL1Q9NZ71 1219 aa21.04■□□□□ 0.96
ATPAF2-209ENST00000497871 LMCD1Q9NZU5 365 aa21.04■□□□□ 0.96
ATPAF2-209ENST00000497871 COG5Q9UP83 839 aa21.04■□□□□ 0.96
ATPAF2-209ENST00000497871 PIK3CDO00329 1044 aa21.03■□□□□ 0.96
ATPAF2-209ENST00000497871 LPXNO60711 386 aa21.03■□□□□ 0.96
ATPAF2-209ENST00000497871 SMIM10L2AP0DMW4 78 aa21.03■□□□□ 0.96
ATPAF2-209ENST00000497871 SMIM10L2BP0DMW5 78 aa21.03■□□□□ 0.96
ATPAF2-209ENST00000497871 CYFIP1Q7L576 1253 aa21.03■□□□□ 0.96
ATPAF2-209ENST00000497871 SPRED2Q7Z698 418 aa21.03■□□□□ 0.96
ATPAF2-209ENST00000497871 SMARCC2Q8TAQ2 1214 aa21.03■□□□□ 0.96
ATPAF2-209ENST00000497871 CUL5Q93034 780 aa21.03■□□□□ 0.96
ATPAF2-209ENST00000497871 BAZ2BQ9UIF8 2168 aaKnown RBP21.03■□□□□ 0.96
ATPAF2-209ENST00000497871 GNAQP50148 359 aa21.02■□□□□ 0.96
ATPAF2-209ENST00000497871 SEMA3FQ13275 785 aa21.02■□□□□ 0.96
ATPAF2-209ENST00000497871 PCNX4Q63HM2 1172 aa21.02■□□□□ 0.96
ATPAF2-209ENST00000497871 USP17L6PQ6QN14 398 aa21.02■□□□□ 0.96
ATPAF2-209ENST00000497871 CASC1Q6TDU7 716 aa21.02■□□□□ 0.96
ATPAF2-209ENST00000497871 DBF4BQ8NFT6 615 aa21.02■□□□□ 0.96
ATPAF2-209ENST00000497871 GPR20Q99678 358 aa21.02■□□□□ 0.96
ATPAF2-209ENST00000497871 SENP7Q9BQF6 1050 aa21.02■□□□□ 0.96
ATPAF2-209ENST00000497871 SEC63Q9UGP8 760 aaKnown RBP21.02■□□□□ 0.96
ATPAF2-209ENST00000497871 TRANK1O15050 2925 aa21.02■□□□□ 0.96
ATPAF2-209ENST00000497871 NCOR1O75376 2440 aa21.02■□□□□ 0.95
ATPAF2-209ENST00000497871 MEIS2O14770 477 aa21.01■□□□□ 0.95
ATPAF2-209ENST00000497871 TREHO43280 583 aa21.01■□□□□ 0.95
ATPAF2-209ENST00000497871 PRC1O43663 620 aa21.01■□□□□ 0.95
ATPAF2-209ENST00000497871 CAND2O75155 1236 aa21.01■□□□□ 0.95
ATPAF2-209ENST00000497871 GNAT1P11488 350 aa21.01■□□□□ 0.95
ATPAF2-209ENST00000497871 MCM5P33992 734 aa21.01■□□□□ 0.95
ATPAF2-209ENST00000497871 ERVK-21P61565 698 aa21.01■□□□□ 0.95
ATPAF2-209ENST00000497871 PLEKHG4Q58EX7 1191 aa21.01■□□□□ 0.95
ATPAF2-209ENST00000497871 TMEM87BQ96K49 555 aa21.01■□□□□ 0.95
ATPAF2-209ENST00000497871 TGS1Q96RS0 853 aaKnown RBP21.01■□□□□ 0.95
ATPAF2-209ENST00000497871 MYL10Q9BUA6 226 aa21.01■□□□□ 0.95
ATPAF2-209ENST00000497871 INSL6Q9Y581 213 aa21.01■□□□□ 0.95
ATPAF2-209ENST00000497871 XIRP2A4UGR9 3374 aa21.01■□□□□ 0.95
ATPAF2-209ENST00000497871 MYH7BA7E2Y1 1941 aa21■□□□□ 0.95
ATPAF2-209ENST00000497871 LINC01553A4QN01 128 aa21■□□□□ 0.95
ATPAF2-209ENST00000497871 AMHP03971 560 aa21■□□□□ 0.95
ATPAF2-209ENST00000497871 IRX6P78412 446 aaPredicted RBP21■□□□□ 0.95
ATPAF2-209ENST00000497871 MKRN4PQ13434 485 aaPredicted RBP21■□□□□ 0.95
ATPAF2-209ENST00000497871 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21■□□□□ 0.95
ATPAF2-209ENST00000497871 NFXL1Q6ZNB6 911 aa21■□□□□ 0.95
ATPAF2-209ENST00000497871 NLRX1Q86UT6 975 aa21■□□□□ 0.95
ATPAF2-209ENST00000497871 GIMAP8Q8ND71 665 aaPredicted RBP21■□□□□ 0.95
ATPAF2-209ENST00000497871 HLA-CQ95604 372 aa21■□□□□ 0.95
ATPAF2-209ENST00000497871 SUGCTQ9HAC7 445 aa21■□□□□ 0.95
ATPAF2-209ENST00000497871 SETD4Q9NVD3 440 aa21■□□□□ 0.95
ATPAF2-209ENST00000497871 ZNF215Q9UL58 517 aaPredicted RBP21■□□□□ 0.95
ATPAF2-209ENST00000497871 CCDC69A6NI79 296 aa20.99■□□□□ 0.95
ATPAF2-209ENST00000497871 SH2B2O14492 632 aaPredicted RBP20.99■□□□□ 0.95
ATPAF2-209ENST00000497871 LIFRP42702 1097 aa20.99■□□□□ 0.95
ATPAF2-209ENST00000497871 KCNQ1P51787 676 aa20.99■□□□□ 0.95
ATPAF2-209ENST00000497871 FAM117BQ6P1L5 589 aa20.99■□□□□ 0.95
ATPAF2-209ENST00000497871 SRBD1Q8N5C6 995 aaKnown RBP20.99■□□□□ 0.95
ATPAF2-209ENST00000497871 LSG1Q9H089 658 aaKnown RBP20.99■□□□□ 0.95
ATPAF2-209ENST00000497871 PSTPIP2Q9H939 334 aa20.99■□□□□ 0.95
ATPAF2-209ENST00000497871 CALM1P0DP23 149 aa20.98■□□□□ 0.95
ATPAF2-209ENST00000497871 CALM2P0DP24 149 aa20.98■□□□□ 0.95
ATPAF2-209ENST00000497871 CALM3P0DP25 149 aa20.98■□□□□ 0.95
ATPAF2-209ENST00000497871 SEPT8Q92599 483 aa20.98■□□□□ 0.95
ATPAF2-209ENST00000497871 MTUS1Q9ULD2 1270 aa20.98■□□□□ 0.95
ATPAF2-209ENST00000497871 PLEKHA8P1O95397 391 aa20.97■□□□□ 0.95
ATPAF2-209ENST00000497871 ADAM17P78536 824 aa20.97■□□□□ 0.95
ATPAF2-209ENST00000497871 HTRA4P83105 476 aaPredicted RBP20.97■□□□□ 0.95
ATPAF2-209ENST00000497871 UTP14CQ5TAP6 766 aaKnown RBP20.97■□□□□ 0.95
ATPAF2-209ENST00000497871 MYOCDQ8IZQ8 938 aa20.97■□□□□ 0.95
ATPAF2-209ENST00000497871 GDPD5Q8WTR4 605 aa20.97■□□□□ 0.95
ATPAF2-209ENST00000497871 CDHR1Q96JP9 859 aa20.97■□□□□ 0.95
ATPAF2-209ENST00000497871 NECAB3Q96P71 396 aaPredicted RBP20.97■□□□□ 0.95
ATPAF2-209ENST00000497871 SLC27A2O14975 620 aa20.96■□□□□ 0.95
ATPAF2-209ENST00000497871 NECTIN1Q15223 517 aa20.96■□□□□ 0.95
ATPAF2-209ENST00000497871 TRIM50Q86XT4 487 aa20.96■□□□□ 0.95
ATPAF2-209ENST00000497871 CMTR1Q8N1G2 835 aaKnown RBP20.96■□□□□ 0.95
ATPAF2-209ENST00000497871 GPRASP2Q96D09 838 aa20.96■□□□□ 0.95
ATPAF2-209ENST00000497871 TELO2Q9Y4R8 837 aa20.96■□□□□ 0.95
ATPAF2-209ENST00000497871 SLC12A7Q9Y666 1083 aa20.96■□□□□ 0.95
ATPAF2-209ENST00000497871 REV3LO60673 3130 aa20.96■□□□□ 0.95
ATPAF2-209ENST00000497871 BDP1A6H8Y1 2624 aa20.96■□□□□ 0.95
ATPAF2-209ENST00000497871 NRCAMQ92823 1304 aa20.96■□□□□ 0.95
ATPAF2-209ENST00000497871 RBAK-RBAKDNI3L0D1 243 aa20.95■□□□□ 0.94
ATPAF2-209ENST00000497871 CTSHP09668 335 aa20.95■□□□□ 0.94
ATPAF2-209ENST00000497871 SP4Q02446 784 aa20.95■□□□□ 0.94
ATPAF2-209ENST00000497871 FAM26DQ5JW98 314 aa20.95■□□□□ 0.94
ATPAF2-209ENST00000497871 CREB3L3Q68CJ9 461 aa20.95■□□□□ 0.94
ATPAF2-209ENST00000497871 FANCBQ8NB91 859 aa20.95■□□□□ 0.94
ATPAF2-209ENST00000497871 SP7Q8TDD2 431 aaPredicted RBP20.95■□□□□ 0.94
ATPAF2-209ENST00000497871 TOP1MTQ969P6 601 aa20.95■□□□□ 0.94
ATPAF2-209ENST00000497871 ESYT1Q9BSJ8 1104 aa20.95■□□□□ 0.94
ATPAF2-209ENST00000497871 PTPRSQ13332 1948 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms