RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 USP49Q70CQ1 688 aa16■□□□□ 0.15
VPS26A-209ENST00000497564 ELOA2Q8IYF1 753 aaPredicted RBP16■□□□□ 0.15
VPS26A-209ENST00000497564 DNERQ8NFT8 737 aa16■□□□□ 0.15
VPS26A-209ENST00000497564 NSUN6Q8TEA1 469 aaKnown RBP16■□□□□ 0.15
VPS26A-209ENST00000497564 MXRA8Q9BRK3 442 aa16■□□□□ 0.15
VPS26A-209ENST00000497564 PDCD2LQ9BRP1 358 aa16■□□□□ 0.15
VPS26A-209ENST00000497564 RAB34Q9BZG1 259 aa16■□□□□ 0.15
VPS26A-209ENST00000497564 SLC26A4O43511 780 aa15.99■□□□□ 0.15
VPS26A-209ENST00000497564 IGHA2P01877 340 aa15.99■□□□□ 0.15
VPS26A-209ENST00000497564 CCND3P30281 292 aaPredicted RBP15.99■□□□□ 0.15
VPS26A-209ENST00000497564 CYP2C19P33261 490 aa15.99■□□□□ 0.15
VPS26A-209ENST00000497564 TXLNAP40222 546 aa15.99■□□□□ 0.15
VPS26A-209ENST00000497564 TXKP42681 527 aa15.99■□□□□ 0.15
VPS26A-209ENST00000497564 ARHGEF16Q5VV41 709 aa15.99■□□□□ 0.15
VPS26A-209ENST00000497564 UBE2Q1Q7Z7E8 422 aa15.99■□□□□ 0.15
VPS26A-209ENST00000497564 ANKRD35Q8N283 1001 aa15.99■□□□□ 0.15
VPS26A-209ENST00000497564 IL31RAQ8NI17 732 aa15.99■□□□□ 0.15
VPS26A-209ENST00000497564 EPSTI1Q96J88 318 aa15.99■□□□□ 0.15
VPS26A-209ENST00000497564 GZF1Q9H116 711 aaPredicted RBP15.99■□□□□ 0.15
VPS26A-209ENST00000497564 TTC12Q9H892 705 aaPredicted RBP15.99■□□□□ 0.15
VPS26A-209ENST00000497564 USP25Q9UHP3 1055 aa15.99■□□□□ 0.15
VPS26A-209ENST00000497564 UBIAD1Q9Y5Z9 338 aa15.99■□□□□ 0.15
VPS26A-209ENST00000497564 MYH9P35579 1960 aaKnown RBP15.98■□□□□ 0.15
VPS26A-209ENST00000497564 RANBP2P49792 3224 aaKnown RBP15.98■□□□□ 0.15
VPS26A-209ENST00000497564 MSH4O15457 936 aa15.98■□□□□ 0.15
VPS26A-209ENST00000497564 STAM2O75886 525 aa15.98■□□□□ 0.15
VPS26A-209ENST00000497564 PGK2P07205 417 aa15.98■□□□□ 0.15
VPS26A-209ENST00000497564 CCND2P30279 289 aa15.98■□□□□ 0.15
VPS26A-209ENST00000497564 TECP42680 631 aa15.98■□□□□ 0.15
VPS26A-209ENST00000497564 MRPS9P82933 396 aaKnown RBP15.98■□□□□ 0.15
VPS26A-209ENST00000497564 VSIG10LQ86VR7 867 aa15.98■□□□□ 0.15
VPS26A-209ENST00000497564 PLA2G4DQ86XP0 818 aa15.98■□□□□ 0.15
VPS26A-209ENST00000497564 FAM133AQ8N9E0 248 aa15.98■□□□□ 0.15
VPS26A-209ENST00000497564 TRPV1Q8NER1 839 aa15.98■□□□□ 0.15
VPS26A-209ENST00000497564 CYP2W1Q8TAV3 490 aa15.98■□□□□ 0.15
VPS26A-209ENST00000497564 SLC5A5Q92911 643 aa15.98■□□□□ 0.15
VPS26A-209ENST00000497564 IWS1Q96ST2 819 aa15.98■□□□□ 0.15
VPS26A-209ENST00000497564 CRISPLD2Q9H0B8 497 aa15.98■□□□□ 0.15
VPS26A-209ENST00000497564 TNMDQ9H2S6 317 aa15.98■□□□□ 0.15
VPS26A-209ENST00000497564 HMX1Q9NP08 348 aaPredicted RBP15.98■□□□□ 0.15
VPS26A-209ENST00000497564 PCDHA12Q9UN75 941 aa15.98■□□□□ 0.15
VPS26A-209ENST00000497564 DNAJC25-GNG10A0A024R161 153 aa15.97■□□□□ 0.15
VPS26A-209ENST00000497564 LOC102724159A0A0B4J2E5 919 aa15.97■□□□□ 0.15
VPS26A-209ENST00000497564 POLR2DO15514 142 aaKnown RBP15.97■□□□□ 0.15
VPS26A-209ENST00000497564 STRNO43815 780 aa15.97■□□□□ 0.15
VPS26A-209ENST00000497564 MARCH6O60337 910 aa15.97■□□□□ 0.15
VPS26A-209ENST00000497564 TFRCP02786 760 aaKnown RBP15.97■□□□□ 0.15
VPS26A-209ENST00000497564 EIF2AK2P19525 551 aaKnown RBP15.97■□□□□ 0.15
VPS26A-209ENST00000497564 UBA7P41226 1012 aa15.97■□□□□ 0.15
VPS26A-209ENST00000497564 PWP2Q15269 919 aaKnown RBP15.97■□□□□ 0.15
VPS26A-209ENST00000497564 KRBA2Q6ZNG9 492 aa15.97■□□□□ 0.15
VPS26A-209ENST00000497564 DPP9Q86TI2 863 aa15.97■□□□□ 0.15
VPS26A-209ENST00000497564 ABRAQ8N0Z2 381 aa15.97■□□□□ 0.15
VPS26A-209ENST00000497564 DIS3LQ8TF46 1054 aaKnown RBP15.97■□□□□ 0.15
VPS26A-209ENST00000497564 JADE2Q9NQC1 790 aa15.97■□□□□ 0.15
VPS26A-209ENST00000497564 ADD3Q9UEY8 706 aaKnown RBP15.97■□□□□ 0.15
VPS26A-209ENST00000497564 A0A087X0B3 334 aa15.96■□□□□ 0.15
VPS26A-209ENST00000497564 POTEB2H3BUK9 544 aa15.96■□□□□ 0.15
VPS26A-209ENST00000497564 ACTN4O43707 911 aaKnown RBP15.96■□□□□ 0.15
VPS26A-209ENST00000497564 FARP2O94887 1054 aaPredicted RBP15.96■□□□□ 0.15
VPS26A-209ENST00000497564 NR3C2P08235 984 aa15.96■□□□□ 0.15
VPS26A-209ENST00000497564 FCER1AP12319 257 aa15.96■□□□□ 0.15
VPS26A-209ENST00000497564 ITGB5P18084 799 aa15.96■□□□□ 0.15
VPS26A-209ENST00000497564 EDNRBP24530 442 aa15.96■□□□□ 0.15
VPS26A-209ENST00000497564 MNX1P50219 401 aaPredicted RBP15.96■□□□□ 0.15
VPS26A-209ENST00000497564 SPIRE1Q08AE8 756 aa15.96■□□□□ 0.15
VPS26A-209ENST00000497564 E2F4Q16254 413 aa15.96■□□□□ 0.15
VPS26A-209ENST00000497564 KANK3Q6NY19 840 aa15.96■□□□□ 0.15
VPS26A-209ENST00000497564 TRMT44Q8IYL2 757 aaKnown RBP15.96■□□□□ 0.15
VPS26A-209ENST00000497564 PURBQ96QR8 312 aaKnown RBP15.96■□□□□ 0.15
VPS26A-209ENST00000497564 MMP19Q99542 508 aa15.96■□□□□ 0.15
VPS26A-209ENST00000497564 LRWD1Q9UFC0 647 aa15.96■□□□□ 0.15
VPS26A-209ENST00000497564 STK24Q9Y6E0 443 aa15.96■□□□□ 0.15
VPS26A-209ENST00000497564 SYCE3A1L190 88 aa15.95■□□□□ 0.14
VPS26A-209ENST00000497564 MAFGO15525 162 aa15.95■□□□□ 0.14
VPS26A-209ENST00000497564 PSMD10O75832 226 aa15.95■□□□□ 0.14
VPS26A-209ENST00000497564 ALDH5A1P51649 535 aaPredicted RBP15.95■□□□□ 0.14
VPS26A-209ENST00000497564 KCTD2Q14681 263 aa15.95■□□□□ 0.14
VPS26A-209ENST00000497564 LONRF3Q496Y0 759 aa15.95■□□□□ 0.14
VPS26A-209ENST00000497564 LHX8Q68G74 356 aa15.95■□□□□ 0.14
VPS26A-209ENST00000497564 LRSAM1Q6UWE0 723 aa15.95■□□□□ 0.14
VPS26A-209ENST00000497564 CABP7Q86V35 215 aa15.95■□□□□ 0.14
VPS26A-209ENST00000497564 IQUBQ8NA54 791 aa15.95■□□□□ 0.14
VPS26A-209ENST00000497564 GPRASP2Q96D09 838 aa15.95■□□□□ 0.14
VPS26A-209ENST00000497564 INPP4AQ96PE3 977 aaPredicted RBP15.95■□□□□ 0.14
VPS26A-209ENST00000497564 RIT2Q99578 217 aa15.95■□□□□ 0.14
VPS26A-209ENST00000497564 SDF4Q9BRK5 362 aa15.95■□□□□ 0.14
VPS26A-209ENST00000497564 MMTAG2Q9BU76 263 aaKnown RBP15.95■□□□□ 0.14
VPS26A-209ENST00000497564 DISC1Q9NRI5 854 aa15.95■□□□□ 0.14
VPS26A-209ENST00000497564 CCDC39Q9UFE4 941 aa15.95■□□□□ 0.14
VPS26A-209ENST00000497564 VAV3Q9UKW4 847 aa15.95■□□□□ 0.14
VPS26A-209ENST00000497564 ASTN1O14525 1302 aa15.94■□□□□ 0.14
VPS26A-209ENST00000497564 POTEMA6NI47 508 aa15.94■□□□□ 0.14
VPS26A-209ENST00000497564 PP2D1A8MPX8 630 aa15.94■□□□□ 0.14
VPS26A-209ENST00000497564 B4DLN1 442 aa15.94■□□□□ 0.14
VPS26A-209ENST00000497564 SLFN14P0C7P3 912 aa15.94■□□□□ 0.14
VPS26A-209ENST00000497564 ARP10275 920 aa15.94■□□□□ 0.14
VPS26A-209ENST00000497564 MYCLP12524 364 aaPredicted RBP15.94■□□□□ 0.14
VPS26A-209ENST00000497564 CNTN2Q02246 1040 aa15.94■□□□□ 0.14
VPS26A-209ENST00000497564 PPP2R5CQ13362 524 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms