RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 METAP2P50579 478 aaKnown RBP eCLIP12.19□□□□□ -0.46
NELFE-213ENST00000494956 GRIN2CQ14957 1233 aa12.19□□□□□ -0.46
NELFE-213ENST00000494956 TCTN1Q2MV58 587 aa12.19□□□□□ -0.46
NELFE-213ENST00000494956 GNPTABQ3T906 1256 aa12.19□□□□□ -0.46
NELFE-213ENST00000494956 UTP14CQ5TAP6 766 aaKnown RBP12.19□□□□□ -0.46
NELFE-213ENST00000494956 SESTD1Q86VW0 696 aa12.19□□□□□ -0.46
NELFE-213ENST00000494956 C7orf31Q8N865 590 aa12.19□□□□□ -0.46
NELFE-213ENST00000494956 CYP2W1Q8TAV3 490 aa12.19□□□□□ -0.46
NELFE-213ENST00000494956 GPR20Q99678 358 aa12.19□□□□□ -0.46
NELFE-213ENST00000494956 NCOA5Q9HCD5 579 aaKnown RBP12.19□□□□□ -0.46
NELFE-213ENST00000494956 PPP4R2Q9NY27 417 aa12.19□□□□□ -0.46
NELFE-213ENST00000494956 YBX2Q9Y2T7 364 aaKnown RBP12.19□□□□□ -0.46
NELFE-213ENST00000494956 NOP56O00567 594 aaKnown RBP12.18□□□□□ -0.46
NELFE-213ENST00000494956 DTNBO60941 627 aa12.18□□□□□ -0.46
NELFE-213ENST00000494956 PPFIA4O75335 1185 aa12.18□□□□□ -0.46
NELFE-213ENST00000494956 REC8O95072 547 aa12.18□□□□□ -0.46
NELFE-213ENST00000494956 HMGB1P09429 215 aaKnown RBP12.18□□□□□ -0.46
NELFE-213ENST00000494956 RETREG2Q8NC44 543 aa12.18□□□□□ -0.46
NELFE-213ENST00000494956 PHKBQ93100 1093 aa12.18□□□□□ -0.46
NELFE-213ENST00000494956 UIMC1Q96RL1 719 aa12.18□□□□□ -0.46
NELFE-213ENST00000494956 KATNAL1Q9BW62 490 aa12.18□□□□□ -0.46
NELFE-213ENST00000494956 USP26Q9BXU7 913 aa12.18□□□□□ -0.46
NELFE-213ENST00000494956 OSBPL7Q9BZF2 842 aa12.18□□□□□ -0.46
NELFE-213ENST00000494956 NKX2-4Q9H2Z4 354 aa12.18□□□□□ -0.46
NELFE-213ENST00000494956 UBIAD1Q9Y5Z9 338 aa12.18□□□□□ -0.46
NELFE-213ENST00000494956 COL6A3P12111 3177 aa12.18□□□□□ -0.46
NELFE-213ENST00000494956 SMCO2A6NFE2 343 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 SPDYE3A6NKU9 549 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 H3BRB1 525 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 PITPNM1O00562 1244 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 STAM2O75886 525 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 SMIM10L2AP0DMW4 78 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 SMIM10L2BP0DMW5 78 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 CKBP12277 381 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 KCNA2P16389 499 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 ADCY7P51828 1080 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 CCT2P78371 535 aaKnown RBP12.17□□□□□ -0.46
NELFE-213ENST00000494956 BFSP2Q13515 415 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 TOB2Q14106 344 aaPredicted RBP12.17□□□□□ -0.46
NELFE-213ENST00000494956 NEDD9Q14511 834 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 PKN1Q16512 942 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 TRIM71Q2Q1W2 868 aaKnown RBP12.17□□□□□ -0.46
NELFE-213ENST00000494956 ZNF618Q5T7W0 954 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 JAKMIP3Q5VZ66 844 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 TRAF7Q6Q0C0 670 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 METTL7BQ6UX53 244 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 TMCO2Q7Z6W1 182 aaPredicted RBP12.17□□□□□ -0.46
NELFE-213ENST00000494956 RPUSD2Q8IZ73 545 aaKnown RBP12.17□□□□□ -0.46
NELFE-213ENST00000494956 SLC17A8Q8NDX2 589 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 TIFAQ96CG3 184 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 ANO3Q9BYT9 981 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 AGXT2Q9BYV1 514 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 UPF3BQ9BZI7 483 aaKnown RBP12.17□□□□□ -0.46
NELFE-213ENST00000494956 FTOQ9C0B1 505 aaKnown RBP eCLIP12.17□□□□□ -0.46
NELFE-213ENST00000494956 ZNF576Q9H609 170 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 TUT1Q9H6E5 874 aaKnown RBP12.17□□□□□ -0.46
NELFE-213ENST00000494956 RIC8AQ9NPQ8 531 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 BARHL2Q9NY43 387 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 MYO9BQ13459 2157 aa12.17□□□□□ -0.46
NELFE-213ENST00000494956 KAT6AQ92794 2004 aa12.16□□□□□ -0.46
NELFE-213ENST00000494956 GSTTP1A0A1W2PQM5 241 aa12.16□□□□□ -0.46
NELFE-213ENST00000494956 TREHO43280 583 aa12.16□□□□□ -0.46
NELFE-213ENST00000494956 NBNO60934 754 aa12.16□□□□□ -0.46
NELFE-213ENST00000494956 ARP10275 920 aa12.16□□□□□ -0.46
NELFE-213ENST00000494956 MTMR1Q13613 665 aa12.16□□□□□ -0.46
NELFE-213ENST00000494956 MBTPS1Q14703 1052 aa12.16□□□□□ -0.46
NELFE-213ENST00000494956 NTRK3Q16288 839 aa12.16□□□□□ -0.46
NELFE-213ENST00000494956 PFKFB3Q16875 520 aaPredicted RBP12.16□□□□□ -0.46
NELFE-213ENST00000494956 LRRC8DQ7L1W4 858 aa12.16□□□□□ -0.46
NELFE-213ENST00000494956 NLRX1Q86UT6 975 aa12.16□□□□□ -0.46
NELFE-213ENST00000494956 GPRASP2Q96D09 838 aa12.16□□□□□ -0.46
NELFE-213ENST00000494956 RNPEPQ9H4A4 650 aa12.16□□□□□ -0.46
NELFE-213ENST00000494956 JADE2Q9NQC1 790 aa12.16□□□□□ -0.46
NELFE-213ENST00000494956 SETD4Q9NVD3 440 aa12.16□□□□□ -0.46
NELFE-213ENST00000494956 SLC4A7Q9Y6M7 1214 aa12.16□□□□□ -0.46
NELFE-213ENST00000494956 C17orf102A2RUQ5 167 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 ARHGEF15O94989 841 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 SCG2P13521 617 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 SELPP16109 830 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 ATP2A2P16615 1042 aaKnown RBP12.15□□□□□ -0.46
NELFE-213ENST00000494956 MARK3P27448 753 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 PSMA5P28066 241 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 PDIA3P30101 505 aaKnown RBP12.15□□□□□ -0.46
NELFE-213ENST00000494956 TCF7P36402 384 aaPredicted RBP12.15□□□□□ -0.46
NELFE-213ENST00000494956 CLK2P49760 499 aaKnown RBP12.15□□□□□ -0.46
NELFE-213ENST00000494956 STK3Q13188 491 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 PTK7Q13308 1070 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 XRRA1Q6P2D8 792 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 RUFY3Q7L099 469 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 CAGE1Q8TC20 777 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 RASGRP4Q8TDF6 673 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 ATP6V0A1Q93050 837 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 ZBTB10Q96DT7 871 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 SENP7Q9BQF6 1050 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 MXRA8Q9BRK3 442 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 PRDM12Q9H4Q4 367 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 ZSWIM6Q9HCJ5 1215 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 SIP14410 1827 aa12.15□□□□□ -0.46
NELFE-213ENST00000494956 DDX39AO00148 427 aaKnown RBP12.14□□□□□ -0.47
NELFE-213ENST00000494956 PRPF3O43395 683 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms