RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 KCNH6Q9H252 994 aa18.44■□□□□ 0.54
COL4A2-209ENST00000494852 TUT1Q9H6E5 874 aaKnown RBP18.44■□□□□ 0.54
COL4A2-209ENST00000494852 ZSWIM5Q9P217 1185 aa18.44■□□□□ 0.54
COL4A2-209ENST00000494852 MYH6P13533 1939 aa18.43■□□□□ 0.54
COL4A2-209ENST00000494852 B4E1Z4 1266 aa18.43■□□□□ 0.54
COL4A2-209ENST00000494852 RBAK-RBAKDNI3L0D1 243 aa18.43■□□□□ 0.54
COL4A2-209ENST00000494852 SDSP20132 328 aa18.43■□□□□ 0.54
COL4A2-209ENST00000494852 TCEAL5Q5H9L2 206 aa18.43■□□□□ 0.54
COL4A2-209ENST00000494852 B4GALNT3Q6L9W6 998 aa18.43■□□□□ 0.54
COL4A2-209ENST00000494852 RILPL2Q969X0 211 aa18.43■□□□□ 0.54
COL4A2-209ENST00000494852 MTMR8Q96EF0 704 aa18.43■□□□□ 0.54
COL4A2-209ENST00000494852 UIMC1Q96RL1 719 aa18.43■□□□□ 0.54
COL4A2-209ENST00000494852 NSUN3Q9H649 340 aaKnown RBP18.43■□□□□ 0.54
COL4A2-209ENST00000494852 MLXIPQ9HAP2 919 aa18.43■□□□□ 0.54
COL4A2-209ENST00000494852 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.42■□□□□ 0.54
COL4A2-209ENST00000494852 C19orf67A6NJJ6 358 aa18.42■□□□□ 0.54
COL4A2-209ENST00000494852 ZBTB5O15062 677 aa18.42■□□□□ 0.54
COL4A2-209ENST00000494852 TREHO43280 583 aa18.42■□□□□ 0.54
COL4A2-209ENST00000494852 NCK2O43639 380 aa18.42■□□□□ 0.54
COL4A2-209ENST00000494852 SORBS3O60504 671 aa18.42■□□□□ 0.54
COL4A2-209ENST00000494852 SMIM10L2AP0DMW4 78 aa18.42■□□□□ 0.54
COL4A2-209ENST00000494852 SMIM10L2BP0DMW5 78 aa18.42■□□□□ 0.54
COL4A2-209ENST00000494852 NUCB1Q02818 461 aa18.42■□□□□ 0.54
COL4A2-209ENST00000494852 ZP2Q05996 745 aa18.42■□□□□ 0.54
COL4A2-209ENST00000494852 CHD1LQ86WJ1 897 aa18.42■□□□□ 0.54
COL4A2-209ENST00000494852 APBB2Q92870 758 aa18.42■□□□□ 0.54
COL4A2-209ENST00000494852 RNPEPQ9H4A4 650 aa18.42■□□□□ 0.54
COL4A2-209ENST00000494852 PCDHA1Q9Y5I3 950 aa18.42■□□□□ 0.54
COL4A2-209ENST00000494852 LAMA4Q16363 1823 aa18.42■□□□□ 0.54
COL4A2-209ENST00000494852 PPP1R11O60927 126 aaPredicted RBP18.41■□□□□ 0.54
COL4A2-209ENST00000494852 UPP2O95045 317 aa18.41■□□□□ 0.54
COL4A2-209ENST00000494852 LGALS2P05162 132 aa18.41■□□□□ 0.54
COL4A2-209ENST00000494852 GNAT1P11488 350 aa18.41■□□□□ 0.54
COL4A2-209ENST00000494852 CCND2P30279 289 aa18.41■□□□□ 0.54
COL4A2-209ENST00000494852 IRX6P78412 446 aaPredicted RBP18.41■□□□□ 0.54
COL4A2-209ENST00000494852 ADHFE1Q8IWW8 467 aa18.41■□□□□ 0.54
COL4A2-209ENST00000494852 STAG2Q8N3U4 1231 aa18.41■□□□□ 0.54
COL4A2-209ENST00000494852 IL31RAQ8NI17 732 aa18.41■□□□□ 0.54
COL4A2-209ENST00000494852 USP26Q9BXU7 913 aa18.41■□□□□ 0.54
COL4A2-209ENST00000494852 KLRF2D3W0D1 207 aa18.4■□□□□ 0.54
COL4A2-209ENST00000494852 C5orf67F2Z3F1 127 aa18.4■□□□□ 0.54
COL4A2-209ENST00000494852 HOXA13P31271 388 aaPredicted RBP18.4■□□□□ 0.54
COL4A2-209ENST00000494852 TRAF1Q13077 416 aa18.4■□□□□ 0.54
COL4A2-209ENST00000494852 GPKOWQ92917 476 aaPredicted RBP eCLIP18.4■□□□□ 0.54
COL4A2-209ENST00000494852 UBAC1Q9BSL1 405 aa18.4■□□□□ 0.54
COL4A2-209ENST00000494852 IFIH1Q9BYX4 1025 aaKnown RBP18.4■□□□□ 0.54
COL4A2-209ENST00000494852 OSBPL7Q9BZF2 842 aa18.4■□□□□ 0.54
COL4A2-209ENST00000494852 UPF3BQ9BZI7 483 aaKnown RBP18.4■□□□□ 0.54
COL4A2-209ENST00000494852 KRT23Q9C075 422 aa18.4■□□□□ 0.54
COL4A2-209ENST00000494852 CNNM2Q9H8M5 875 aa18.4■□□□□ 0.54
COL4A2-209ENST00000494852 WDFY4Q6ZS81 3184 aa18.39■□□□□ 0.53
COL4A2-209ENST00000494852 RB1P06400 928 aa18.39■□□□□ 0.53
COL4A2-209ENST00000494852 MRE11P49959 708 aa18.39■□□□□ 0.53
COL4A2-209ENST00000494852 NHLH1Q02575 133 aa18.39■□□□□ 0.53
COL4A2-209ENST00000494852 IMMTQ16891 758 aaKnown RBP18.39■□□□□ 0.53
COL4A2-209ENST00000494852 CTC1Q2NKJ3 1217 aa18.39■□□□□ 0.53
COL4A2-209ENST00000494852 FAM26DQ5JW98 314 aa18.39■□□□□ 0.53
COL4A2-209ENST00000494852 IFIT1BQ5T764 474 aaKnown RBP18.39■□□□□ 0.53
COL4A2-209ENST00000494852 EP400NLQ6ZTU2 488 aa18.39■□□□□ 0.53
COL4A2-209ENST00000494852 IL17RAQ96F46 866 aa18.39■□□□□ 0.53
COL4A2-209ENST00000494852 DSCC1Q9BVC3 393 aa18.39■□□□□ 0.53
COL4A2-209ENST00000494852 LMAN2LQ9H0V9 348 aa18.39■□□□□ 0.53
COL4A2-209ENST00000494852 CLDND1Q9NY35 253 aa18.39■□□□□ 0.53
COL4A2-209ENST00000494852 MAD2L2Q9UI95 211 aa18.39■□□□□ 0.53
COL4A2-209ENST00000494852 RALGAPA2Q2PPJ7 1873 aa18.39■□□□□ 0.53
COL4A2-209ENST00000494852 NLRC5Q86WI3 1866 aa18.38■□□□□ 0.53
COL4A2-209ENST00000494852 PALM3A6NDB9 673 aaPredicted RBP18.38■□□□□ 0.53
COL4A2-209ENST00000494852 GCOM1H8Y6P7 765 aaPredicted RBP18.38■□□□□ 0.53
COL4A2-209ENST00000494852 NOP56O00567 594 aaKnown RBP18.38■□□□□ 0.53
COL4A2-209ENST00000494852 STAM2O75886 525 aa18.38■□□□□ 0.53
COL4A2-209ENST00000494852 CTSHP09668 335 aa18.38■□□□□ 0.53
COL4A2-209ENST00000494852 POLR2MP0CAP2 368 aa18.38■□□□□ 0.53
COL4A2-209ENST00000494852 ICAM3P32942 547 aa18.38■□□□□ 0.53
COL4A2-209ENST00000494852 LTBRP36941 435 aa18.38■□□□□ 0.53
COL4A2-209ENST00000494852 NEDD9Q14511 834 aa18.38■□□□□ 0.53
COL4A2-209ENST00000494852 GNPTABQ3T906 1256 aa18.38■□□□□ 0.53
COL4A2-209ENST00000494852 CWC27Q6UX04 472 aaKnown RBP18.38■□□□□ 0.53
COL4A2-209ENST00000494852 METTL7BQ6UX53 244 aa18.38■□□□□ 0.53
COL4A2-209ENST00000494852 FIBCD1Q8N539 461 aa18.38■□□□□ 0.53
COL4A2-209ENST00000494852 FBXL18Q96ME1 805 aa18.38■□□□□ 0.53
COL4A2-209ENST00000494852 BCAS3Q9H6U6 928 aa18.38■□□□□ 0.53
COL4A2-209ENST00000494852 SETD4Q9NVD3 440 aa18.38■□□□□ 0.53
COL4A2-209ENST00000494852 RWDD3Q9Y3V2 267 aa18.38■□□□□ 0.53
COL4A2-209ENST00000494852 BMPR1AP36894 532 aa18.37■□□□□ 0.53
COL4A2-209ENST00000494852 ADAM17P78536 824 aa18.37■□□□□ 0.53
COL4A2-209ENST00000494852 SMAD2Q15796 467 aaKnown RBP18.37■□□□□ 0.53
COL4A2-209ENST00000494852 RPAINQ86UA6 219 aa18.37■□□□□ 0.53
COL4A2-209ENST00000494852 PLEKHM2Q8IWE5 1019 aa18.37■□□□□ 0.53
COL4A2-209ENST00000494852 ZFP91Q96JP5 570 aaPredicted RBP18.37■□□□□ 0.53
COL4A2-209ENST00000494852 INPP4AQ96PE3 977 aaPredicted RBP18.37■□□□□ 0.53
COL4A2-209ENST00000494852 C11orf84Q9BUA3 381 aaPredicted RBP18.37■□□□□ 0.53
COL4A2-209ENST00000494852 OSBPL3Q9H4L5 887 aa18.37■□□□□ 0.53
COL4A2-209ENST00000494852 SPATA31C2B4DYI2 1134 aa18.36■□□□□ 0.53
COL4A2-209ENST00000494852 LINC00271P0C7V0 271 aa18.36■□□□□ 0.53
COL4A2-209ENST00000494852 CTNNB1P35222 781 aa18.36■□□□□ 0.53
COL4A2-209ENST00000494852 IRS1P35568 1242 aa18.36■□□□□ 0.53
COL4A2-209ENST00000494852 FRMPD4Q14CM0 1322 aa18.36■□□□□ 0.53
COL4A2-209ENST00000494852 SEC23AQ15436 765 aa18.36■□□□□ 0.53
COL4A2-209ENST00000494852 FCHSD1Q86WN1 690 aa18.36■□□□□ 0.53
COL4A2-209ENST00000494852 POP1Q99575 1024 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms