RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 RSPH10B2B2RC85 870 aa20.11■□□□□ 0.81
COL9A1-210ENST00000493682 RSPH10BP0C881 870 aa20.11■□□□□ 0.81
COL9A1-210ENST00000493682 SMIM10L2AP0DMW4 78 aa20.11■□□□□ 0.81
COL9A1-210ENST00000493682 SMIM10L2BP0DMW5 78 aa20.11■□□□□ 0.81
COL9A1-210ENST00000493682 HOXC8P31273 242 aa20.11■□□□□ 0.81
COL9A1-210ENST00000493682 MRPS9P82933 396 aaKnown RBP20.11■□□□□ 0.81
COL9A1-210ENST00000493682 MKRN4PQ13434 485 aaPredicted RBP20.11■□□□□ 0.81
COL9A1-210ENST00000493682 WTAPQ15007 396 aa20.11■□□□□ 0.81
COL9A1-210ENST00000493682 DBF4BQ8NFT6 615 aa20.11■□□□□ 0.81
COL9A1-210ENST00000493682 RUFY2Q8WXA3 655 aa20.11■□□□□ 0.81
COL9A1-210ENST00000493682 ATP6V0A1Q93050 837 aa20.11■□□□□ 0.81
COL9A1-210ENST00000493682 FRMPD4Q14CM0 1322 aa20.1■□□□□ 0.81
COL9A1-210ENST00000493682 E7EWF7 191 aa20.1■□□□□ 0.81
COL9A1-210ENST00000493682 LGALS2P05162 132 aa20.1■□□□□ 0.81
COL9A1-210ENST00000493682 CHMLP26374 656 aa20.1■□□□□ 0.81
COL9A1-210ENST00000493682 RALYLQ86SE5 291 aaKnown RBP20.1■□□□□ 0.81
COL9A1-210ENST00000493682 NCOA7Q8NI08 942 aa20.1■□□□□ 0.81
COL9A1-210ENST00000493682 INPP4AQ96PE3 977 aaPredicted RBP20.1■□□□□ 0.81
COL9A1-210ENST00000493682 INSL6Q9Y581 213 aa20.1■□□□□ 0.81
COL9A1-210ENST00000493682 SPATA31C2B4DYI2 1134 aa20.09■□□□□ 0.81
COL9A1-210ENST00000493682 NOP56O00567 594 aaKnown RBP20.09■□□□□ 0.81
COL9A1-210ENST00000493682 TREHO43280 583 aa20.09■□□□□ 0.81
COL9A1-210ENST00000493682 AMHP03971 560 aa20.09■□□□□ 0.81
COL9A1-210ENST00000493682 ICAM3P32942 547 aa20.09■□□□□ 0.81
COL9A1-210ENST00000493682 C1QBPQ07021 282 aaKnown RBP20.09■□□□□ 0.81
COL9A1-210ENST00000493682 SART3Q15020 963 aaKnown RBP20.09■□□□□ 0.81
COL9A1-210ENST00000493682 GNPTABQ3T906 1256 aa20.09■□□□□ 0.81
COL9A1-210ENST00000493682 PLEKHG4Q58EX7 1191 aa20.09■□□□□ 0.81
COL9A1-210ENST00000493682 CATIPQ7Z7H3 387 aa20.09■□□□□ 0.81
COL9A1-210ENST00000493682 PIBF1Q8WXW3 757 aa20.09■□□□□ 0.81
COL9A1-210ENST00000493682 C1QTNF1Q9BXJ1 281 aa20.09■□□□□ 0.81
COL9A1-210ENST00000493682 RNPEPQ9H4A4 650 aa20.09■□□□□ 0.81
COL9A1-210ENST00000493682 STAM2O75886 525 aa20.08■□□□□ 0.81
COL9A1-210ENST00000493682 ANTXR2P58335 489 aa20.08■□□□□ 0.81
COL9A1-210ENST00000493682 SEMA3FQ13275 785 aa20.08■□□□□ 0.81
COL9A1-210ENST00000493682 NEDD9Q14511 834 aa20.08■□□□□ 0.81
COL9A1-210ENST00000493682 METTL7BQ6UX53 244 aa20.08■□□□□ 0.81
COL9A1-210ENST00000493682 CYFIP1Q7L576 1253 aa20.08■□□□□ 0.81
COL9A1-210ENST00000493682 MYOCDQ8IZQ8 938 aa20.08■□□□□ 0.81
COL9A1-210ENST00000493682 C17orf80Q9BSJ5 609 aa20.08■□□□□ 0.81
COL9A1-210ENST00000493682 USP26Q9BXU7 913 aa20.08■□□□□ 0.81
COL9A1-210ENST00000493682 RTEL1Q9NZ71 1219 aa20.08■□□□□ 0.81
COL9A1-210ENST00000493682 BAZ2BQ9UIF8 2168 aaKnown RBP20.08■□□□□ 0.8
COL9A1-210ENST00000493682 HTRA4P83105 476 aaPredicted RBP20.07■□□□□ 0.8
COL9A1-210ENST00000493682 IGDCC4Q8TDY8 1250 aa20.07■□□□□ 0.8
COL9A1-210ENST00000493682 GPR20Q99678 358 aa20.07■□□□□ 0.8
COL9A1-210ENST00000493682 SIP14410 1827 aa20.06■□□□□ 0.8
COL9A1-210ENST00000493682 FIBPO43427 364 aa20.06■□□□□ 0.8
COL9A1-210ENST00000493682 CAND2O75155 1236 aa20.06■□□□□ 0.8
COL9A1-210ENST00000493682 TRIM50Q86XT4 487 aa20.06■□□□□ 0.8
COL9A1-210ENST00000493682 FBXO22Q8NEZ5 403 aa20.06■□□□□ 0.8
COL9A1-210ENST00000493682 SP7Q8TDD2 431 aaPredicted RBP20.06■□□□□ 0.8
COL9A1-210ENST00000493682 SEPT8Q92599 483 aa20.06■□□□□ 0.8
COL9A1-210ENST00000493682 OSBPL7Q9BZF2 842 aa20.06■□□□□ 0.8
COL9A1-210ENST00000493682 EPHX3Q9H6B9 360 aa20.06■□□□□ 0.8
COL9A1-210ENST00000493682 SETD4Q9NVD3 440 aa20.06■□□□□ 0.8
COL9A1-210ENST00000493682 TELO2Q9Y4R8 837 aa20.06■□□□□ 0.8
COL9A1-210ENST00000493682 SGSM2O43147 1006 aa20.05■□□□□ 0.8
COL9A1-210ENST00000493682 CTSHP09668 335 aa20.05■□□□□ 0.8
COL9A1-210ENST00000493682 GNAT1P11488 350 aa20.05■□□□□ 0.8
COL9A1-210ENST00000493682 MB21D2Q8IYB1 491 aaPredicted RBP20.05■□□□□ 0.8
COL9A1-210ENST00000493682 MAP3K14Q99558 947 aa20.05■□□□□ 0.8
COL9A1-210ENST00000493682 SPZ1Q9BXG8 430 aa20.05■□□□□ 0.8
COL9A1-210ENST00000493682 UBE2ZQ9H832 354 aaPredicted RBP20.05■□□□□ 0.8
COL9A1-210ENST00000493682 MICAL3Q7RTP6 2002 aa20.05■□□□□ 0.8
COL9A1-210ENST00000493682 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.04■□□□□ 0.8
COL9A1-210ENST00000493682 PCNX4Q63HM2 1172 aa20.04■□□□□ 0.8
COL9A1-210ENST00000493682 USP17L6PQ6QN14 398 aa20.04■□□□□ 0.8
COL9A1-210ENST00000493682 SMARCC2Q8TAQ2 1214 aa20.04■□□□□ 0.8
COL9A1-210ENST00000493682 MAP4K1Q92918 833 aa20.04■□□□□ 0.8
COL9A1-210ENST00000493682 TOP1MTQ969P6 601 aa20.04■□□□□ 0.8
COL9A1-210ENST00000493682 RRP36Q96EU6 259 aaKnown RBP20.04■□□□□ 0.8
COL9A1-210ENST00000493682 MYL10Q9BUA6 226 aa20.04■□□□□ 0.8
COL9A1-210ENST00000493682 LY9Q9HBG7 655 aa20.04■□□□□ 0.8
COL9A1-210ENST00000493682 ZNF215Q9UL58 517 aaPredicted RBP20.04■□□□□ 0.8
COL9A1-210ENST00000493682 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.03■□□□□ 0.8
COL9A1-210ENST00000493682 PIK3CDO00329 1044 aa20.03■□□□□ 0.8
COL9A1-210ENST00000493682 MEIS2O14770 477 aa20.03■□□□□ 0.8
COL9A1-210ENST00000493682 ADAM17P78536 824 aa20.03■□□□□ 0.8
COL9A1-210ENST00000493682 SP4Q02446 784 aa20.03■□□□□ 0.8
COL9A1-210ENST00000493682 EPC2Q52LR7 807 aa20.03■□□□□ 0.8
COL9A1-210ENST00000493682 UTP14CQ5TAP6 766 aaKnown RBP20.03■□□□□ 0.8
COL9A1-210ENST00000493682 XRRA1Q6P2D8 792 aa20.03■□□□□ 0.8
COL9A1-210ENST00000493682 ZNF654Q8IZM8 581 aa20.03■□□□□ 0.8
COL9A1-210ENST00000493682 CTCFLQ8NI51 663 aaPredicted RBP20.03■□□□□ 0.8
COL9A1-210ENST00000493682 LMBR1Q8WVP7 490 aa20.03■□□□□ 0.8
COL9A1-210ENST00000493682 CUL5Q93034 780 aa20.03■□□□□ 0.8
COL9A1-210ENST00000493682 YME1L1Q96TA2 773 aa20.03■□□□□ 0.8
COL9A1-210ENST00000493682 SENP7Q9BQF6 1050 aa20.03■□□□□ 0.8
COL9A1-210ENST00000493682 DDAH1O94760 285 aa20.02■□□□□ 0.8
COL9A1-210ENST00000493682 UPP2O95045 317 aa20.02■□□□□ 0.8
COL9A1-210ENST00000493682 SMARCA1P28370 1054 aa20.02■□□□□ 0.8
COL9A1-210ENST00000493682 KIF5BP33176 963 aa20.02■□□□□ 0.8
COL9A1-210ENST00000493682 ARHGAP4P98171 946 aa20.02■□□□□ 0.8
COL9A1-210ENST00000493682 FAM26DQ5JW98 314 aa20.02■□□□□ 0.8
COL9A1-210ENST00000493682 KHSRPQ92945 711 aaKnown RBP eCLIP20.02■□□□□ 0.8
COL9A1-210ENST00000493682 MRPL38Q96DV4 380 aaKnown RBP20.02■□□□□ 0.8
COL9A1-210ENST00000493682 RBM8AQ9Y5S9 174 aaKnown RBP20.02■□□□□ 0.8
COL9A1-210ENST00000493682 DOCK5Q9H7D0 1870 aa20.02■□□□□ 0.8
COL9A1-210ENST00000493682 KCNA5P22460 613 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms