RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 BRD4O60885 1362 aaPredicted RBP6.18□□□□□ -1.42
CLIP4-212ENST00000493551 USP6P35125 1406 aa6.18□□□□□ -1.42
CLIP4-212ENST00000493551 PIK3C2AO00443 1686 aa6.18□□□□□ -1.42
CLIP4-212ENST00000493551 CYR61O00622 381 aa6.18□□□□□ -1.42
CLIP4-212ENST00000493551 DBHP09172 617 aa6.18□□□□□ -1.42
CLIP4-212ENST00000493551 ATF2P15336 505 aa6.18□□□□□ -1.42
CLIP4-212ENST00000493551 RAG1P15918 1043 aa6.18□□□□□ -1.42
CLIP4-212ENST00000493551 CAMK2GQ13555 558 aaPredicted RBP6.18□□□□□ -1.42
CLIP4-212ENST00000493551 MEI1Q5TIA1 1274 aa6.18□□□□□ -1.42
CLIP4-212ENST00000493551 SMIM5Q71RC9 77 aa6.18□□□□□ -1.42
CLIP4-212ENST00000493551 AEBP1Q8IUX7 1158 aa6.18□□□□□ -1.42
CLIP4-212ENST00000493551 LTV1Q96GA3 475 aaPredicted RBP6.18□□□□□ -1.42
CLIP4-212ENST00000493551 PLA2G2DQ9UNK4 145 aa6.18□□□□□ -1.42
CLIP4-212ENST00000493551 MINPP1Q9UNW1 487 aa6.18□□□□□ -1.42
CLIP4-212ENST00000493551 PNPLA7Q6ZV29 1317 aa6.18□□□□□ -1.42
CLIP4-212ENST00000493551 PAPPAQ13219 1627 aa6.17□□□□□ -1.42
CLIP4-212ENST00000493551 TNS2Q63HR2 1409 aa6.17□□□□□ -1.42
CLIP4-212ENST00000493551 NHSQ6T4R5 1651 aa6.17□□□□□ -1.42
CLIP4-212ENST00000493551 COL18A1P39060 1754 aa6.17□□□□□ -1.42
CLIP4-212ENST00000493551 SLIT3O75094 1523 aa6.17□□□□□ -1.42
CLIP4-212ENST00000493551 SLPIP03973 132 aa6.17□□□□□ -1.42
CLIP4-212ENST00000493551 HSPA6P17066 643 aa6.17□□□□□ -1.42
CLIP4-212ENST00000493551 MVKQ03426 396 aa6.17□□□□□ -1.42
CLIP4-212ENST00000493551 RAD51AP2Q09MP3 1159 aa6.17□□□□□ -1.42
CLIP4-212ENST00000493551 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.17□□□□□ -1.42
CLIP4-212ENST00000493551 BTAF1O14981 1849 aa6.17□□□□□ -1.42
CLIP4-212ENST00000493551 RAB3GAP2Q9H2M9 1393 aa6.17□□□□□ -1.42
CLIP4-212ENST00000493551 PRPF40AO75400 957 aaKnown RBP6.16□□□□□ -1.42
CLIP4-212ENST00000493551 PLATP00750 562 aa6.16□□□□□ -1.42
CLIP4-212ENST00000493551 NCAM1P13591 858 aa6.16□□□□□ -1.42
CLIP4-212ENST00000493551 ST13P50502 369 aaKnown RBP6.16□□□□□ -1.42
CLIP4-212ENST00000493551 ARHGEF25Q86VW2 580 aa6.16□□□□□ -1.42
CLIP4-212ENST00000493551 AP5S1Q9NUS5 200 aa6.16□□□□□ -1.42
CLIP4-212ENST00000493551 MAP3K5Q99683 1374 aa6.16□□□□□ -1.42
CLIP4-212ENST00000493551 TUBGCP6Q96RT7 1819 aa6.15□□□□□ -1.42
CLIP4-212ENST00000493551 PF4P02776 101 aa6.15□□□□□ -1.42
CLIP4-212ENST00000493551 ARSHQ5FYA8 562 aa6.15□□□□□ -1.42
CLIP4-212ENST00000493551 CHST13Q8NET6 341 aa6.15□□□□□ -1.42
CLIP4-212ENST00000493551 DVL3Q92997 716 aaPredicted RBP6.15□□□□□ -1.42
CLIP4-212ENST00000493551 RNF19AQ9NV58 838 aa6.15□□□□□ -1.42
CLIP4-212ENST00000493551 NTMQ9P121 344 aa6.15□□□□□ -1.42
CLIP4-212ENST00000493551 HCFC2Q9Y5Z7 792 aa6.15□□□□□ -1.42
CLIP4-212ENST00000493551 TTC21BQ7Z4L5 1316 aa6.15□□□□□ -1.43
CLIP4-212ENST00000493551 CENPJQ9HC77 1338 aaPredicted RBP6.15□□□□□ -1.43
CLIP4-212ENST00000493551 QRICH2Q9H0J4 1663 aa6.14□□□□□ -1.43
CLIP4-212ENST00000493551 A0A1W2PQJ5 194 aa6.14□□□□□ -1.43
CLIP4-212ENST00000493551 MEIS1O00470 390 aa6.14□□□□□ -1.43
CLIP4-212ENST00000493551 IL2RBP14784 551 aa6.14□□□□□ -1.43
CLIP4-212ENST00000493551 VAV1P15498 845 aa6.14□□□□□ -1.43
CLIP4-212ENST00000493551 ACVRL1P37023 503 aa6.14□□□□□ -1.43
CLIP4-212ENST00000493551 MPP2Q14168 576 aa6.14□□□□□ -1.43
CLIP4-212ENST00000493551 TAF1CQ15572 869 aaPredicted RBP6.14□□□□□ -1.43
CLIP4-212ENST00000493551 HLA-DQA1Q5Y7H0 255 aa6.14□□□□□ -1.43
CLIP4-212ENST00000493551 REC114Q7Z4M0 266 aa6.14□□□□□ -1.43
CLIP4-212ENST00000493551 B3GNT8Q7Z7M8 397 aa6.14□□□□□ -1.43
CLIP4-212ENST00000493551 ZNF761Q86XN6 746 aaPredicted RBP6.14□□□□□ -1.43
CLIP4-212ENST00000493551 NME9Q86XW9 330 aa6.14□□□□□ -1.43
CLIP4-212ENST00000493551 COL23A1Q86Y22 540 aaPredicted RBP6.14□□□□□ -1.43
CLIP4-212ENST00000493551 Q8N1X5 172 aa6.14□□□□□ -1.43
CLIP4-212ENST00000493551 NAT16Q8N8M0 369 aa6.14□□□□□ -1.43
CLIP4-212ENST00000493551 TMEM52Q8NDY8 209 aa6.14□□□□□ -1.43
CLIP4-212ENST00000493551 CCNL1Q9UK58 526 aaPredicted RBP6.14□□□□□ -1.43
CLIP4-212ENST00000493551 CCDC7Q96M83 1385 aa6.14□□□□□ -1.43
CLIP4-212ENST00000493551 KAT6BQ8WYB5 2073 aa6.14□□□□□ -1.43
CLIP4-212ENST00000493551 ABCC6O95255 1503 aa6.14□□□□□ -1.43
CLIP4-212ENST00000493551 CTSKP43235 329 aa6.13□□□□□ -1.43
CLIP4-212ENST00000493551 SARSP49591 514 aaKnown RBP6.13□□□□□ -1.43
CLIP4-212ENST00000493551 PRR5P85299 388 aa6.13□□□□□ -1.43
CLIP4-212ENST00000493551 TBC1D10BQ4KMP7 808 aaPredicted RBP6.13□□□□□ -1.43
CLIP4-212ENST00000493551 BICRALQ6AI39 1079 aa6.13□□□□□ -1.43
CLIP4-212ENST00000493551 USP51Q70EK9 711 aa6.13□□□□□ -1.43
CLIP4-212ENST00000493551 JAMLQ86YT9 394 aa6.13□□□□□ -1.43
CLIP4-212ENST00000493551 ZFPM1Q8IX07 1006 aa6.13□□□□□ -1.43
CLIP4-212ENST00000493551 RHOVQ96L33 236 aa6.13□□□□□ -1.43
CLIP4-212ENST00000493551 BCL9O00512 1426 aa6.13□□□□□ -1.43
CLIP4-212ENST00000493551 NFAT5O94916 1531 aa6.13□□□□□ -1.43
CLIP4-212ENST00000493551 UTRNP46939 3433 aa6.13□□□□□ -1.43
CLIP4-212ENST00000493551 F6X3S4 739 aa6.12□□□□□ -1.43
CLIP4-212ENST00000493551 CLEC3AO75596 197 aa6.12□□□□□ -1.43
CLIP4-212ENST00000493551 ASGR2P07307 311 aa6.12□□□□□ -1.43
CLIP4-212ENST00000493551 MC3RP41968 323 aa6.12□□□□□ -1.43
CLIP4-212ENST00000493551 CRB2Q5IJ48 1285 aa6.12□□□□□ -1.43
CLIP4-212ENST00000493551 CRIP3Q6Q6R5 217 aa6.12□□□□□ -1.43
CLIP4-212ENST00000493551 TRPM1Q7Z4N2 1603 aa6.12□□□□□ -1.43
CLIP4-212ENST00000493551 KTN1Q86UP2 1357 aaKnown RBP6.12□□□□□ -1.43
CLIP4-212ENST00000493551 IGSF1Q8N6C5 1336 aa6.12□□□□□ -1.43
CLIP4-212ENST00000493551 KCNH5Q8NCM2 988 aa6.12□□□□□ -1.43
CLIP4-212ENST00000493551 SH3RF3Q8TEJ3 882 aaPredicted RBP6.12□□□□□ -1.43
CLIP4-212ENST00000493551 DOT1LQ8TEK3 1739 aa6.12□□□□□ -1.43
CLIP4-212ENST00000493551 ANTXR1Q9H6X2 564 aa6.12□□□□□ -1.43
CLIP4-212ENST00000493551 PDLIM7Q9NR12 457 aa6.12□□□□□ -1.43
CLIP4-212ENST00000493551 GFOD1Q9NXC2 390 aa6.12□□□□□ -1.43
CLIP4-212ENST00000493551 PRR13Q9NZ81 148 aa6.12□□□□□ -1.43
CLIP4-212ENST00000493551 GMIPQ9P107 970 aa6.12□□□□□ -1.43
CLIP4-212ENST00000493551 F8W031 263 aaPredicted RBP6.11□□□□□ -1.43
CLIP4-212ENST00000493551 FZD7O75084 574 aa6.11□□□□□ -1.43
CLIP4-212ENST00000493551 CCNFP41002 786 aa6.11□□□□□ -1.43
CLIP4-212ENST00000493551 CRTC3Q6UUV7 619 aa6.11□□□□□ -1.43
CLIP4-212ENST00000493551 SPRED1Q7Z699 444 aa6.11□□□□□ -1.43
CLIP4-212ENST00000493551 NMRK2Q9NPI5 230 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms