RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 UPP2O95045 317 aa15.41■□□□□ 0.06
USF1-206ENST00000491629 PARP1P09874 1014 aaKnown RBP15.41■□□□□ 0.06
USF1-206ENST00000491629 SMIM10L2AP0DMW4 78 aa15.41■□□□□ 0.06
USF1-206ENST00000491629 SMIM10L2BP0DMW5 78 aa15.41■□□□□ 0.06
USF1-206ENST00000491629 ALADP13716 330 aa15.41■□□□□ 0.06
USF1-206ENST00000491629 MRE11P49959 708 aa15.41■□□□□ 0.06
USF1-206ENST00000491629 TICAM2Q86XR7 235 aa15.41■□□□□ 0.06
USF1-206ENST00000491629 ATP6V0A1Q93050 837 aa15.41■□□□□ 0.06
USF1-206ENST00000491629 FBXL18Q96ME1 805 aa15.41■□□□□ 0.06
USF1-206ENST00000491629 UIMC1Q96RL1 719 aa15.41■□□□□ 0.06
USF1-206ENST00000491629 ZDBF2Q9HCK1 2354 aa15.41■□□□□ 0.06
USF1-206ENST00000491629 PLXNA4Q9HCM2 1894 aa15.4■□□□□ 0.06
USF1-206ENST00000491629 C17orf102A2RUQ5 167 aa15.4■□□□□ 0.06
USF1-206ENST00000491629 H3BRB1 525 aa15.4■□□□□ 0.06
USF1-206ENST00000491629 DCXO43602 365 aa15.4■□□□□ 0.06
USF1-206ENST00000491629 LGALS2P05162 132 aa15.4■□□□□ 0.06
USF1-206ENST00000491629 CTSHP09668 335 aa15.4■□□□□ 0.06
USF1-206ENST00000491629 SDSP20132 328 aa15.4■□□□□ 0.06
USF1-206ENST00000491629 NHLH1Q02575 133 aa15.4■□□□□ 0.06
USF1-206ENST00000491629 DLX2Q07687 328 aaPredicted RBP15.4■□□□□ 0.06
USF1-206ENST00000491629 TIGD5Q53EQ6 642 aa15.4■□□□□ 0.06
USF1-206ENST00000491629 IQCA1Q86XH1 822 aa15.4■□□□□ 0.06
USF1-206ENST00000491629 SAMD11Q96NU1 681 aa15.4■□□□□ 0.06
USF1-206ENST00000491629 TUT1Q9H6E5 874 aaKnown RBP15.4■□□□□ 0.06
USF1-206ENST00000491629 CTNNA3Q9UI47 895 aa15.4■□□□□ 0.06
USF1-206ENST00000491629 MAD2L2Q9UI95 211 aa15.4■□□□□ 0.06
USF1-206ENST00000491629 SUPT16HQ9Y5B9 1047 aaKnown RBP15.4■□□□□ 0.06
USF1-206ENST00000491629 MYO15AQ9UKN7 3530 aa15.4■□□□□ 0.06
USF1-206ENST00000491629 KMT2EQ8IZD2 1858 aa15.4■□□□□ 0.06
USF1-206ENST00000491629 CFAP54Q96N23 3096 aa15.39■□□□□ 0.05
USF1-206ENST00000491629 ZNF213O14771 459 aa15.39■□□□□ 0.05
USF1-206ENST00000491629 DHX16O60231 1041 aaKnown RBP15.39■□□□□ 0.05
USF1-206ENST00000491629 IRS1P35568 1242 aa15.39■□□□□ 0.05
USF1-206ENST00000491629 ADAM17P78536 824 aa15.39■□□□□ 0.05
USF1-206ENST00000491629 SEMA3FQ13275 785 aa15.39■□□□□ 0.05
USF1-206ENST00000491629 PTPROQ16827 1216 aa15.39■□□□□ 0.05
USF1-206ENST00000491629 CTC1Q2NKJ3 1217 aa15.39■□□□□ 0.05
USF1-206ENST00000491629 PUS10Q3MIT2 529 aaKnown RBP15.39■□□□□ 0.05
USF1-206ENST00000491629 HFE2Q6ZVN8 426 aa15.39■□□□□ 0.05
USF1-206ENST00000491629 YME1L1Q96TA2 773 aa15.39■□□□□ 0.05
USF1-206ENST00000491629 AMNQ9BXJ7 453 aa15.39■□□□□ 0.05
USF1-206ENST00000491629 NSUN3Q9H649 340 aaKnown RBP15.39■□□□□ 0.05
USF1-206ENST00000491629 RC3H2Q9HBD1 1191 aaKnown RBP15.39■□□□□ 0.05
USF1-206ENST00000491629 TRIM6-TRIM34B2RNG4 842 aa15.38■□□□□ 0.05
USF1-206ENST00000491629 GRM6O15303 877 aa15.38■□□□□ 0.05
USF1-206ENST00000491629 GTF2F1P35269 517 aaKnown RBP eCLIP15.38■□□□□ 0.05
USF1-206ENST00000491629 MRPS9P82933 396 aaKnown RBP15.38■□□□□ 0.05
USF1-206ENST00000491629 SEC23AQ15436 765 aa15.38■□□□□ 0.05
USF1-206ENST00000491629 CCDC178Q5BJE1 867 aa15.38■□□□□ 0.05
USF1-206ENST00000491629 KCNV1Q6PIU1 500 aa15.38■□□□□ 0.05
USF1-206ENST00000491629 RPAINQ86UA6 219 aa15.38■□□□□ 0.05
USF1-206ENST00000491629 TRIM50Q86XT4 487 aa15.38■□□□□ 0.05
USF1-206ENST00000491629 ADHFE1Q8IWW8 467 aa15.38■□□□□ 0.05
USF1-206ENST00000491629 SEPT8Q92599 483 aa15.38■□□□□ 0.05
USF1-206ENST00000491629 RILPL2Q969X0 211 aa15.38■□□□□ 0.05
USF1-206ENST00000491629 IL25Q9H293 177 aa15.38■□□□□ 0.05
USF1-206ENST00000491629 SETD4Q9NVD3 440 aa15.38■□□□□ 0.05
USF1-206ENST00000491629 CLDND1Q9NY35 253 aa15.38■□□□□ 0.05
USF1-206ENST00000491629 PCDHA1Q9Y5I3 950 aa15.38■□□□□ 0.05
USF1-206ENST00000491629 DMDP11532 3685 aa15.38■□□□□ 0.05
USF1-206ENST00000491629 PALM3A6NDB9 673 aaPredicted RBP15.37■□□□□ 0.05
USF1-206ENST00000491629 KLRF2D3W0D1 207 aa15.37■□□□□ 0.05
USF1-206ENST00000491629 ZBTB5O15062 677 aa15.37■□□□□ 0.05
USF1-206ENST00000491629 TGFB3P10600 412 aa15.37■□□□□ 0.05
USF1-206ENST00000491629 HYAL1Q12794 435 aa15.37■□□□□ 0.05
USF1-206ENST00000491629 HDAC1Q13547 482 aaPredicted RBP15.37■□□□□ 0.05
USF1-206ENST00000491629 FAM26DQ5JW98 314 aa15.37■□□□□ 0.05
USF1-206ENST00000491629 EP400NLQ6ZTU2 488 aa15.37■□□□□ 0.05
USF1-206ENST00000491629 IFIH1Q9BYX4 1025 aaKnown RBP15.37■□□□□ 0.05
USF1-206ENST00000491629 LNPKQ9C0E8 428 aa15.37■□□□□ 0.05
USF1-206ENST00000491629 PRKAG3Q9UGI9 489 aa15.37■□□□□ 0.05
USF1-206ENST00000491629 CACNA1HO95180 2353 aa15.36■□□□□ 0.05
USF1-206ENST00000491629 C5orf67F2Z3F1 127 aa15.36■□□□□ 0.05
USF1-206ENST00000491629 CHRNA1P02708 482 aa15.36■□□□□ 0.05
USF1-206ENST00000491629 CCND2P30279 289 aa15.36■□□□□ 0.05
USF1-206ENST00000491629 CAMK1Q14012 370 aa15.36■□□□□ 0.05
USF1-206ENST00000491629 SMAD2Q15796 467 aaKnown RBP15.36■□□□□ 0.05
USF1-206ENST00000491629 CLUL1Q15846 466 aa15.36■□□□□ 0.05
USF1-206ENST00000491629 CSPP1Q1MSJ5 1256 aa15.36■□□□□ 0.05
USF1-206ENST00000491629 CWC27Q6UX04 472 aaKnown RBP15.36■□□□□ 0.05
USF1-206ENST00000491629 CYB5R4Q7L1T6 521 aa15.36■□□□□ 0.05
USF1-206ENST00000491629 PHOX2BQ99453 314 aa15.36■□□□□ 0.05
USF1-206ENST00000491629 GPR20Q99678 358 aa15.36■□□□□ 0.05
USF1-206ENST00000491629 MLXIPQ9HAP2 919 aa15.36■□□□□ 0.05
USF1-206ENST00000491629 SENP2Q9HC62 589 aa15.36■□□□□ 0.05
USF1-206ENST00000491629 MAP3K20Q9NYL2 800 aaKnown RBP15.36■□□□□ 0.05
USF1-206ENST00000491629 FRMPD4Q14CM0 1322 aa15.36■□□□□ 0.05
USF1-206ENST00000491629 FNDC1Q4ZHG4 1894 aaPredicted RBP15.35■□□□□ 0.05
USF1-206ENST00000491629 LINC01565O15544 149 aa15.35■□□□□ 0.05
USF1-206ENST00000491629 MBTPS2O43462 519 aa15.35■□□□□ 0.05
USF1-206ENST00000491629 CYTH3O43739 400 aa15.35■□□□□ 0.05
USF1-206ENST00000491629 CAND2O75155 1236 aa15.35■□□□□ 0.05
USF1-206ENST00000491629 TBX10O75333 385 aa15.35■□□□□ 0.05
USF1-206ENST00000491629 ICAM3P32942 547 aa15.35■□□□□ 0.05
USF1-206ENST00000491629 BMPR1AP36894 532 aa15.35■□□□□ 0.05
USF1-206ENST00000491629 RUFY4Q6ZNE9 571 aa15.35■□□□□ 0.05
USF1-206ENST00000491629 CYFIP1Q7L576 1253 aa15.35■□□□□ 0.05
USF1-206ENST00000491629 FCHSD1Q86WN1 690 aa15.35■□□□□ 0.05
USF1-206ENST00000491629 PLEKHM2Q8IWE5 1019 aa15.35■□□□□ 0.05
USF1-206ENST00000491629 LMBR1Q8WVP7 490 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms