RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-222ENST00000490839 IFIT1BQ5T764 474 aaKnown RBP17.72■□□□□ 0.43
AGAP3-222ENST00000490839 IL31RAQ8NI17 732 aa17.72■□□□□ 0.43
AGAP3-222ENST00000490839 PABPC5Q96DU9 382 aaKnown RBP17.72■□□□□ 0.43
AGAP3-222ENST00000490839 KRT23Q9C075 422 aa17.72■□□□□ 0.43
AGAP3-222ENST00000490839 LNPKQ9C0E8 428 aa17.72■□□□□ 0.43
AGAP3-222ENST00000490839 TUT1Q9H6E5 874 aaKnown RBP17.72■□□□□ 0.43
AGAP3-222ENST00000490839 CNNM2Q9H8M5 875 aa17.72■□□□□ 0.43
AGAP3-222ENST00000490839 MLXIPQ9HAP2 919 aa17.72■□□□□ 0.43
AGAP3-222ENST00000490839 PCDHA1Q9Y5I3 950 aa17.72■□□□□ 0.43
AGAP3-222ENST00000490839 KLRF2D3W0D1 207 aa17.71■□□□□ 0.43
AGAP3-222ENST00000490839 RBAK-RBAKDNI3L0D1 243 aa17.71■□□□□ 0.43
AGAP3-222ENST00000490839 TREHO43280 583 aa17.71■□□□□ 0.43
AGAP3-222ENST00000490839 PPP1R11O60927 126 aaPredicted RBP17.71■□□□□ 0.43
AGAP3-222ENST00000490839 LGALS2P05162 132 aa17.71■□□□□ 0.43
AGAP3-222ENST00000490839 HOXA13P31271 388 aaPredicted RBP17.71■□□□□ 0.43
AGAP3-222ENST00000490839 RRP1P56182 461 aaKnown RBP17.71■□□□□ 0.43
AGAP3-222ENST00000490839 TRAF1Q13077 416 aa17.71■□□□□ 0.43
AGAP3-222ENST00000490839 CSPP1Q1MSJ5 1256 aa17.71■□□□□ 0.43
AGAP3-222ENST00000490839 TCEAL5Q5H9L2 206 aa17.71■□□□□ 0.43
AGAP3-222ENST00000490839 TMEM192Q8IY95 271 aa17.71■□□□□ 0.43
AGAP3-222ENST00000490839 STAG2Q8N3U4 1231 aa17.71■□□□□ 0.43
AGAP3-222ENST00000490839 APBB2Q92870 758 aa17.71■□□□□ 0.43
AGAP3-222ENST00000490839 DSCC1Q9BVC3 393 aa17.71■□□□□ 0.43
AGAP3-222ENST00000490839 NSUN3Q9H649 340 aaKnown RBP17.71■□□□□ 0.43
AGAP3-222ENST00000490839 DIAPH3Q9NSV4 1193 aa17.71■□□□□ 0.43
AGAP3-222ENST00000490839 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.7■□□□□ 0.42
AGAP3-222ENST00000490839 DCXO43602 365 aa17.7■□□□□ 0.42
AGAP3-222ENST00000490839 CTSHP09668 335 aa17.7■□□□□ 0.42
AGAP3-222ENST00000490839 GNPTABQ3T906 1256 aa17.7■□□□□ 0.42
AGAP3-222ENST00000490839 CWC27Q6UX04 472 aaKnown RBP17.7■□□□□ 0.42
AGAP3-222ENST00000490839 GPKOWQ92917 476 aaPredicted RBP eCLIP17.7■□□□□ 0.42
AGAP3-222ENST00000490839 UIMC1Q96RL1 719 aa17.7■□□□□ 0.42
AGAP3-222ENST00000490839 IFIH1Q9BYX4 1025 aaKnown RBP17.7■□□□□ 0.42
AGAP3-222ENST00000490839 PRKAG3Q9UGI9 489 aa17.7■□□□□ 0.42
AGAP3-222ENST00000490839 GCOM1H8Y6P7 765 aaPredicted RBP17.69■□□□□ 0.42
AGAP3-222ENST00000490839 HIP1O00291 1037 aa17.69■□□□□ 0.42
AGAP3-222ENST00000490839 NOP56O00567 594 aaKnown RBP17.69■□□□□ 0.42
AGAP3-222ENST00000490839 UPP2O95045 317 aa17.69■□□□□ 0.42
AGAP3-222ENST00000490839 POLR2MP0CAP2 368 aa17.69■□□□□ 0.42
AGAP3-222ENST00000490839 GNAT1P11488 350 aa17.69■□□□□ 0.42
AGAP3-222ENST00000490839 ZP2Q05996 745 aa17.69■□□□□ 0.42
AGAP3-222ENST00000490839 USP26Q9BXU7 913 aa17.69■□□□□ 0.42
AGAP3-222ENST00000490839 RNPEPQ9H4A4 650 aa17.69■□□□□ 0.42
AGAP3-222ENST00000490839 MAD2L2Q9UI95 211 aa17.69■□□□□ 0.42
AGAP3-222ENST00000490839 ZNF318Q5VUA4 2279 aa17.68■□□□□ 0.42
AGAP3-222ENST00000490839 POTEB3A0JP26 581 aa17.68■□□□□ 0.42
AGAP3-222ENST00000490839 PALM3A6NDB9 673 aaPredicted RBP17.68■□□□□ 0.42
AGAP3-222ENST00000490839 NCK2O43639 380 aa17.68■□□□□ 0.42
AGAP3-222ENST00000490839 SEC23AQ15436 765 aa17.68■□□□□ 0.42
AGAP3-222ENST00000490839 POTEBQ6S5H4 581 aa17.68■□□□□ 0.42
AGAP3-222ENST00000490839 METTL7BQ6UX53 244 aa17.68■□□□□ 0.42
AGAP3-222ENST00000490839 ALYREFQ86V81 257 aaKnown RBP17.68■□□□□ 0.42
AGAP3-222ENST00000490839 OSBPL3Q9H4L5 887 aa17.68■□□□□ 0.42
AGAP3-222ENST00000490839 ATG2AQ2TAZ0 1938 aa17.68■□□□□ 0.42
AGAP3-222ENST00000490839 FRMPD4Q14CM0 1322 aa17.68■□□□□ 0.42
AGAP3-222ENST00000490839 BAZ2BQ9UIF8 2168 aaKnown RBP17.67■□□□□ 0.42
AGAP3-222ENST00000490839 C19orf67A6NJJ6 358 aa17.67■□□□□ 0.42
AGAP3-222ENST00000490839 STAM2O75886 525 aa17.67■□□□□ 0.42
AGAP3-222ENST00000490839 ICAM3P32942 547 aa17.67■□□□□ 0.42
AGAP3-222ENST00000490839 NEDD9Q14511 834 aa17.67■□□□□ 0.42
AGAP3-222ENST00000490839 FAM26DQ5JW98 314 aa17.67■□□□□ 0.42
AGAP3-222ENST00000490839 EP400NLQ6ZTU2 488 aa17.67■□□□□ 0.42
AGAP3-222ENST00000490839 FCHSD1Q86WN1 690 aa17.67■□□□□ 0.42
AGAP3-222ENST00000490839 HOMER1Q86YM7 354 aa17.67■□□□□ 0.42
AGAP3-222ENST00000490839 ADHFE1Q8IWW8 467 aa17.67■□□□□ 0.42
AGAP3-222ENST00000490839 FIBCD1Q8N539 461 aa17.67■□□□□ 0.42
AGAP3-222ENST00000490839 IL17RAQ96F46 866 aa17.67■□□□□ 0.42
AGAP3-222ENST00000490839 ZFP91Q96JP5 570 aaPredicted RBP17.67■□□□□ 0.42
AGAP3-222ENST00000490839 INPP4AQ96PE3 977 aaPredicted RBP17.67■□□□□ 0.42
AGAP3-222ENST00000490839 OSBPL7Q9BZF2 842 aa17.67■□□□□ 0.42
AGAP3-222ENST00000490839 KCNH6Q9H252 994 aa17.67■□□□□ 0.42
AGAP3-222ENST00000490839 SETD4Q9NVD3 440 aa17.67■□□□□ 0.42
AGAP3-222ENST00000490839 CLDND1Q9NY35 253 aa17.67■□□□□ 0.42
AGAP3-222ENST00000490839 ZNF215Q9UL58 517 aaPredicted RBP17.67■□□□□ 0.42
AGAP3-222ENST00000490839 RWDD3Q9Y3V2 267 aa17.67■□□□□ 0.42
AGAP3-222ENST00000490839 KAT6AQ92794 2004 aa17.66■□□□□ 0.42
AGAP3-222ENST00000490839 C5orf67F2Z3F1 127 aa17.66■□□□□ 0.42
AGAP3-222ENST00000490839 CTNNB1P35222 781 aa17.66■□□□□ 0.42
AGAP3-222ENST00000490839 RPAINQ86UA6 219 aa17.66■□□□□ 0.42
AGAP3-222ENST00000490839 PLEKHM2Q8IWE5 1019 aa17.66■□□□□ 0.42
AGAP3-222ENST00000490839 SMC5Q8IY18 1101 aa17.66■□□□□ 0.42
AGAP3-222ENST00000490839 GPR20Q99678 358 aa17.66■□□□□ 0.42
AGAP3-222ENST00000490839 C11orf84Q9BUA3 381 aaPredicted RBP17.66■□□□□ 0.42
AGAP3-222ENST00000490839 LMAN2LQ9H0V9 348 aa17.66■□□□□ 0.42
AGAP3-222ENST00000490839 BCAS3Q9H6U6 928 aa17.66■□□□□ 0.42
AGAP3-222ENST00000490839 RIOX1Q9H6W3 641 aa17.66■□□□□ 0.42
AGAP3-222ENST00000490839 DOCK5Q9H7D0 1870 aa17.66■□□□□ 0.42
AGAP3-222ENST00000490839 SPATA31C2B4DYI2 1134 aa17.65■□□□□ 0.42
AGAP3-222ENST00000490839 FIBPO43427 364 aa17.65■□□□□ 0.42
AGAP3-222ENST00000490839 RB1P06400 928 aa17.65■□□□□ 0.42
AGAP3-222ENST00000490839 ADAM17P78536 824 aa17.65■□□□□ 0.42
AGAP3-222ENST00000490839 ARHGAP4P98171 946 aa17.65■□□□□ 0.42
AGAP3-222ENST00000490839 GRM4Q14833 912 aa17.65■□□□□ 0.42
AGAP3-222ENST00000490839 SLC35G1Q2M3R5 365 aa17.65■□□□□ 0.42
AGAP3-222ENST00000490839 TRIM50Q86XT4 487 aa17.65■□□□□ 0.42
AGAP3-222ENST00000490839 LMBR1Q8WVP7 490 aa17.65■□□□□ 0.42
AGAP3-222ENST00000490839 PIGSQ96S52 555 aa17.65■□□□□ 0.42
AGAP3-222ENST00000490839 PNMA6FA0A0J9YX94 578 aa17.64■□□□□ 0.41
AGAP3-222ENST00000490839 MRPS9P82933 396 aaKnown RBP17.64■□□□□ 0.41
AGAP3-222ENST00000490839 SEMA3FQ13275 785 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms