RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 LCHNA4D1U4 455 aa10.66□□□□□ -0.7
SRRM1-217ENST00000490543 M0R2C6 588 aa10.66□□□□□ -0.7
SRRM1-217ENST00000490543 GPAA1O43292 621 aa10.66□□□□□ -0.7
SRRM1-217ENST00000490543 GPR37L1O60883 481 aa10.66□□□□□ -0.7
SRRM1-217ENST00000490543 APPP05067 770 aa10.66□□□□□ -0.7
SRRM1-217ENST00000490543 IQCF3P0C7M6 154 aa10.66□□□□□ -0.7
SRRM1-217ENST00000490543 SUPT20HL2P0C7V6 817 aa10.66□□□□□ -0.7
SRRM1-217ENST00000490543 SLC1A4P43007 532 aa10.66□□□□□ -0.7
SRRM1-217ENST00000490543 TDO2P48775 406 aa10.66□□□□□ -0.7
SRRM1-217ENST00000490543 TFAP4Q01664 338 aa10.66□□□□□ -0.7
SRRM1-217ENST00000490543 IKQ13123 557 aaPredicted RBP10.66□□□□□ -0.7
SRRM1-217ENST00000490543 NBPF20Q3BBV1 942 aa10.66□□□□□ -0.7
SRRM1-217ENST00000490543 TKFCQ3LXA3 575 aa10.66□□□□□ -0.7
SRRM1-217ENST00000490543 NSMFQ6X4W1 530 aa10.66□□□□□ -0.7
SRRM1-217ENST00000490543 TMCO2Q7Z6W1 182 aaPredicted RBP10.66□□□□□ -0.7
SRRM1-217ENST00000490543 MORC4Q8TE76 937 aa10.66□□□□□ -0.7
SRRM1-217ENST00000490543 SLC9A7Q96T83 725 aa10.66□□□□□ -0.7
SRRM1-217ENST00000490543 WDR11Q9BZH6 1224 aa10.66□□□□□ -0.7
SRRM1-217ENST00000490543 VTA1Q9NP79 307 aa10.66□□□□□ -0.7
SRRM1-217ENST00000490543 PRR12Q9ULL5 1215 aa10.66□□□□□ -0.7
SRRM1-217ENST00000490543 LCTP09848 1927 aa10.65□□□□□ -0.7
SRRM1-217ENST00000490543 RNF113AO15541 343 aaKnown RBP10.65□□□□□ -0.7
SRRM1-217ENST00000490543 TSPY3P0CV98 308 aa10.65□□□□□ -0.7
SRRM1-217ENST00000490543 TSPY8P0CW00 308 aa10.65□□□□□ -0.7
SRRM1-217ENST00000490543 ACTN1P12814 892 aa10.65□□□□□ -0.7
SRRM1-217ENST00000490543 NFX1Q12986 1120 aaKnown RBP10.65□□□□□ -0.7
SRRM1-217ENST00000490543 BAATQ14032 418 aaPredicted RBP10.65□□□□□ -0.7
SRRM1-217ENST00000490543 TMEM259Q4ZIN3 620 aa10.65□□□□□ -0.7
SRRM1-217ENST00000490543 FAM47CQ5HY64 1035 aa10.65□□□□□ -0.7
SRRM1-217ENST00000490543 TSHZ3Q63HK5 1081 aa10.65□□□□□ -0.7
SRRM1-217ENST00000490543 RCSD1Q6JBY9 416 aa10.65□□□□□ -0.7
SRRM1-217ENST00000490543 ZBTB33Q86T24 672 aa10.65□□□□□ -0.7
SRRM1-217ENST00000490543 FAM160B2Q86V87 743 aa10.65□□□□□ -0.7
SRRM1-217ENST00000490543 IFNL3Q8IZI9 196 aa10.65□□□□□ -0.7
SRRM1-217ENST00000490543 KBTBD3Q8NAB2 608 aa10.65□□□□□ -0.7
SRRM1-217ENST00000490543 PHOSPHO2Q8TCD6 241 aa10.65□□□□□ -0.7
SRRM1-217ENST00000490543 APPBP2Q92624 585 aa10.65□□□□□ -0.7
SRRM1-217ENST00000490543 GMCL1Q96IK5 515 aa10.65□□□□□ -0.7
SRRM1-217ENST00000490543 MTG1Q9BT17 334 aaPredicted RBP10.65□□□□□ -0.7
SRRM1-217ENST00000490543 FTOQ9C0B1 505 aaKnown RBP eCLIP10.65□□□□□ -0.7
SRRM1-217ENST00000490543 INCENPQ9NQS7 918 aa10.65□□□□□ -0.7
SRRM1-217ENST00000490543 PATL2C9JE40 543 aaKnown RBP10.64□□□□□ -0.71
SRRM1-217ENST00000490543 PI4K2BG5E9Z4 385 aa10.64□□□□□ -0.71
SRRM1-217ENST00000490543 NMT2O60551 498 aa10.64□□□□□ -0.71
SRRM1-217ENST00000490543 PLA2G6O60733 806 aa10.64□□□□□ -0.71
SRRM1-217ENST00000490543 WFS1O76024 890 aa10.64□□□□□ -0.71
SRRM1-217ENST00000490543 PTK2Q05397 1052 aa10.64□□□□□ -0.71
SRRM1-217ENST00000490543 GPNMBQ14956 572 aa10.64□□□□□ -0.71
SRRM1-217ENST00000490543 ALYREFQ86V81 257 aaKnown RBP10.64□□□□□ -0.71
SRRM1-217ENST00000490543 RETREG2Q8NC44 543 aa10.64□□□□□ -0.71
SRRM1-217ENST00000490543 COPS5Q92905 334 aa10.64□□□□□ -0.71
SRRM1-217ENST00000490543 SEC62Q99442 399 aaKnown RBP10.64□□□□□ -0.71
SRRM1-217ENST00000490543 ZNF287Q9HBT7 754 aa10.64□□□□□ -0.71
SRRM1-217ENST00000490543 IL17RBQ9NRM6 502 aa10.64□□□□□ -0.71
SRRM1-217ENST00000490543 ECHDC1Q9NTX5 307 aa10.64□□□□□ -0.71
SRRM1-217ENST00000490543 CCPG1Q9ULG6 757 aa10.64□□□□□ -0.71
SRRM1-217ENST00000490543 MTMR7Q9Y216 660 aa10.64□□□□□ -0.71
SRRM1-217ENST00000490543 GPSM3Q9Y4H4 160 aa10.64□□□□□ -0.71
SRRM1-217ENST00000490543 TRIP12Q14669 1992 aaPredicted RBP10.64□□□□□ -0.71
SRRM1-217ENST00000490543 SCN10AQ9Y5Y9 1956 aa10.64□□□□□ -0.71
SRRM1-217ENST00000490543 PLIN4Q96Q06 1357 aa10.64□□□□□ -0.71
SRRM1-217ENST00000490543 RBM47A0AV96 593 aaKnown RBP10.63□□□□□ -0.71
SRRM1-217ENST00000490543 KIF28PB7ZC32 967 aa10.63□□□□□ -0.71
SRRM1-217ENST00000490543 NFIBO00712 420 aa10.63□□□□□ -0.71
SRRM1-217ENST00000490543 RFC2P35250 354 aa10.63□□□□□ -0.71
SRRM1-217ENST00000490543 SLC16A2P36021 539 aa10.63□□□□□ -0.71
SRRM1-217ENST00000490543 CPT1AP50416 773 aa10.63□□□□□ -0.71
SRRM1-217ENST00000490543 ALDH5A1P51649 535 aaPredicted RBP10.63□□□□□ -0.71
SRRM1-217ENST00000490543 HNRNPUQ00839 825 aaKnown RBP eCLIP10.63□□□□□ -0.71
SRRM1-217ENST00000490543 TCTN1Q2MV58 587 aa10.63□□□□□ -0.71
SRRM1-217ENST00000490543 TTBK2Q6IQ55 1244 aa10.63□□□□□ -0.71
SRRM1-217ENST00000490543 CCDC116Q8IYX3 515 aa10.63□□□□□ -0.71
SRRM1-217ENST00000490543 OR6J1Q8NGC5 347 aa10.63□□□□□ -0.71
SRRM1-217ENST00000490543 GDPD5Q8WTR4 605 aa10.63□□□□□ -0.71
SRRM1-217ENST00000490543 CTAGE1Q96RT6 745 aa10.63□□□□□ -0.71
SRRM1-217ENST00000490543 LRRCC1Q9C099 1032 aa10.63□□□□□ -0.71
SRRM1-217ENST00000490543 MTUS1Q9ULD2 1270 aa10.63□□□□□ -0.71
SRRM1-217ENST00000490543 STX8Q9UNK0 236 aa10.63□□□□□ -0.71
SRRM1-217ENST00000490543 PTPRSQ13332 1948 aa10.62□□□□□ -0.71
SRRM1-217ENST00000490543 A6NJR5 290 aa10.62□□□□□ -0.71
SRRM1-217ENST00000490543 TERTO14746 1132 aaKnown RBP10.62□□□□□ -0.71
SRRM1-217ENST00000490543 ICAM1P05362 532 aa10.62□□□□□ -0.71
SRRM1-217ENST00000490543 GNAT2P19087 354 aa10.62□□□□□ -0.71
SRRM1-217ENST00000490543 CHMP4BP1P59074 171 aa10.62□□□□□ -0.71
SRRM1-217ENST00000490543 DEFB103AP81534 67 aa10.62□□□□□ -0.71
SRRM1-217ENST00000490543 PDE4BQ07343 736 aa10.62□□□□□ -0.71
SRRM1-217ENST00000490543 PPARAQ07869 468 aa10.62□□□□□ -0.71
SRRM1-217ENST00000490543 NFRKBQ6P4R8 1299 aa10.62□□□□□ -0.71
SRRM1-217ENST00000490543 PNMA1Q8ND90 353 aa10.62□□□□□ -0.71
SRRM1-217ENST00000490543 ADAM32Q8TC27 787 aa10.62□□□□□ -0.71
SRRM1-217ENST00000490543 SUGCTQ9HAC7 445 aa10.62□□□□□ -0.71
SRRM1-217ENST00000490543 ADD3Q9UEY8 706 aaKnown RBP10.62□□□□□ -0.71
SRRM1-217ENST00000490543 DDX19BQ9UMR2 479 aa10.62□□□□□ -0.71
SRRM1-217ENST00000490543 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.61□□□□□ -0.71
SRRM1-217ENST00000490543 PTPDC1A2A3K4 754 aa10.61□□□□□ -0.71
SRRM1-217ENST00000490543 BAIAP3O94812 1187 aa10.61□□□□□ -0.71
SRRM1-217ENST00000490543 CALML3P27482 149 aa10.61□□□□□ -0.71
SRRM1-217ENST00000490543 KCNJ6P48051 423 aa10.61□□□□□ -0.71
SRRM1-217ENST00000490543 WDR5P61964 334 aaKnown RBP10.61□□□□□ -0.71
SRRM1-217ENST00000490543 BFSP2Q13515 415 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms