RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 MBTPS1Q14703 1052 aa20.52■□□□□ 0.87
YIPF3-208ENST00000490447 TCTN1Q2MV58 587 aa20.52■□□□□ 0.87
YIPF3-208ENST00000490447 METTL7BQ6UX53 244 aa20.52■□□□□ 0.87
YIPF3-208ENST00000490447 CYFIP1Q7L576 1253 aa20.52■□□□□ 0.87
YIPF3-208ENST00000490447 INPP4AQ96PE3 977 aaPredicted RBP20.52■□□□□ 0.87
YIPF3-208ENST00000490447 RTEL1Q9NZ71 1219 aa20.52■□□□□ 0.87
YIPF3-208ENST00000490447 LMCD1Q9NZU5 365 aa20.52■□□□□ 0.87
YIPF3-208ENST00000490447 ZNF215Q9UL58 517 aaPredicted RBP20.52■□□□□ 0.87
YIPF3-208ENST00000490447 TAF6LQ9Y6J9 622 aa20.52■□□□□ 0.87
YIPF3-208ENST00000490447 PRRC2BQ5JSZ5 2229 aaKnown RBP20.51■□□□□ 0.87
YIPF3-208ENST00000490447 FRMPD4Q14CM0 1322 aa20.51■□□□□ 0.87
YIPF3-208ENST00000490447 LPXNO60711 386 aa20.51■□□□□ 0.87
YIPF3-208ENST00000490447 DDAH1O94760 285 aa20.51■□□□□ 0.87
YIPF3-208ENST00000490447 GNAT1P11488 350 aa20.51■□□□□ 0.87
YIPF3-208ENST00000490447 COL9A1P20849 921 aa20.51■□□□□ 0.87
YIPF3-208ENST00000490447 ICAM3P32942 547 aa20.51■□□□□ 0.87
YIPF3-208ENST00000490447 MRPS9P82933 396 aaKnown RBP20.51■□□□□ 0.87
YIPF3-208ENST00000490447 NFXL1Q6ZNB6 911 aa20.51■□□□□ 0.87
YIPF3-208ENST00000490447 MB21D2Q8IYB1 491 aaPredicted RBP20.51■□□□□ 0.87
YIPF3-208ENST00000490447 ZNF654Q8IZM8 581 aa20.51■□□□□ 0.87
YIPF3-208ENST00000490447 MYOCDQ8IZQ8 938 aa20.51■□□□□ 0.87
YIPF3-208ENST00000490447 DBF4BQ8NFT6 615 aa20.51■□□□□ 0.87
YIPF3-208ENST00000490447 IGDCC4Q8TDY8 1250 aa20.51■□□□□ 0.87
YIPF3-208ENST00000490447 MAP4K1Q92918 833 aa20.51■□□□□ 0.87
YIPF3-208ENST00000490447 NECAB3Q96P71 396 aaPredicted RBP20.51■□□□□ 0.87
YIPF3-208ENST00000490447 MAP3K14Q99558 947 aa20.51■□□□□ 0.87
YIPF3-208ENST00000490447 SPZ1Q9BXG8 430 aa20.51■□□□□ 0.87
YIPF3-208ENST00000490447 INSL6Q9Y581 213 aa20.51■□□□□ 0.87
YIPF3-208ENST00000490447 RBM8AQ9Y5S9 174 aaKnown RBP20.51■□□□□ 0.87
YIPF3-208ENST00000490447 MYH7BA7E2Y1 1941 aa20.5■□□□□ 0.87
YIPF3-208ENST00000490447 LINC01553A4QN01 128 aa20.5■□□□□ 0.87
YIPF3-208ENST00000490447 SPATA31C2B4DYI2 1134 aa20.5■□□□□ 0.87
YIPF3-208ENST00000490447 TREHO43280 583 aa20.5■□□□□ 0.87
YIPF3-208ENST00000490447 CAND2O75155 1236 aa20.5■□□□□ 0.87
YIPF3-208ENST00000490447 ANTXR2P58335 489 aa20.5■□□□□ 0.87
YIPF3-208ENST00000490447 LZTS2Q9BRK4 669 aa20.5■□□□□ 0.87
YIPF3-208ENST00000490447 MYL10Q9BUA6 226 aa20.5■□□□□ 0.87
YIPF3-208ENST00000490447 RNPEPQ9H4A4 650 aa20.5■□□□□ 0.87
YIPF3-208ENST00000490447 PTPRSQ13332 1948 aa20.49■□□□□ 0.87
YIPF3-208ENST00000490447 COL4A4P53420 1690 aaPredicted RBP20.49■□□□□ 0.87
YIPF3-208ENST00000490447 CCDC69A6NI79 296 aa20.49■□□□□ 0.87
YIPF3-208ENST00000490447 CTSHP09668 335 aa20.49■□□□□ 0.87
YIPF3-208ENST00000490447 HOXC8P31273 242 aa20.49■□□□□ 0.87
YIPF3-208ENST00000490447 GNAQP50148 359 aa20.49■□□□□ 0.87
YIPF3-208ENST00000490447 ERVK-21P61565 698 aa20.49■□□□□ 0.87
YIPF3-208ENST00000490447 SP4Q02446 784 aa20.49■□□□□ 0.87
YIPF3-208ENST00000490447 PCNX4Q63HM2 1172 aa20.49■□□□□ 0.87
YIPF3-208ENST00000490447 XRRA1Q6P2D8 792 aa20.49■□□□□ 0.87
YIPF3-208ENST00000490447 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.49■□□□□ 0.87
YIPF3-208ENST00000490447 NLRX1Q86UT6 975 aa20.49■□□□□ 0.87
YIPF3-208ENST00000490447 SEPT8Q92599 483 aa20.49■□□□□ 0.87
YIPF3-208ENST00000490447 GPR20Q99678 358 aa20.49■□□□□ 0.87
YIPF3-208ENST00000490447 BCAS3Q9H6U6 928 aa20.49■□□□□ 0.87
YIPF3-208ENST00000490447 SUGCTQ9HAC7 445 aa20.49■□□□□ 0.87
YIPF3-208ENST00000490447 LY9Q9HBG7 655 aa20.49■□□□□ 0.87
YIPF3-208ENST00000490447 BDP1A6H8Y1 2624 aa20.48■□□□□ 0.87
YIPF3-208ENST00000490447 PRC1O43663 620 aa20.48■□□□□ 0.87
YIPF3-208ENST00000490447 PLEKHG4Q58EX7 1191 aa20.48■□□□□ 0.87
YIPF3-208ENST00000490447 UTP14CQ5TAP6 766 aaKnown RBP20.48■□□□□ 0.87
YIPF3-208ENST00000490447 USP17L6PQ6QN14 398 aa20.48■□□□□ 0.87
YIPF3-208ENST00000490447 GIMAP8Q8ND71 665 aaPredicted RBP20.48■□□□□ 0.87
YIPF3-208ENST00000490447 MTA3Q9BTC8 594 aa20.48■□□□□ 0.87
YIPF3-208ENST00000490447 SETD4Q9NVD3 440 aa20.48■□□□□ 0.87
YIPF3-208ENST00000490447 PIK3CDO00329 1044 aa20.47■□□□□ 0.87
YIPF3-208ENST00000490447 SMARCA1P28370 1054 aa20.47■□□□□ 0.87
YIPF3-208ENST00000490447 MCM5P33992 734 aa20.47■□□□□ 0.87
YIPF3-208ENST00000490447 SEMA3FQ13275 785 aa20.47■□□□□ 0.87
YIPF3-208ENST00000490447 TRIM50Q86XT4 487 aa20.47■□□□□ 0.87
YIPF3-208ENST00000490447 TMTC2Q8N394 836 aa20.47■□□□□ 0.87
YIPF3-208ENST00000490447 FBXO22Q8NEZ5 403 aa20.47■□□□□ 0.87
YIPF3-208ENST00000490447 SENP7Q9BQF6 1050 aa20.47■□□□□ 0.87
YIPF3-208ENST00000490447 BAZ2BQ9UIF8 2168 aaKnown RBP20.46■□□□□ 0.87
YIPF3-208ENST00000490447 CALM1P0DP23 149 aa20.46■□□□□ 0.87
YIPF3-208ENST00000490447 CALM2P0DP24 149 aa20.46■□□□□ 0.87
YIPF3-208ENST00000490447 CALM3P0DP25 149 aa20.46■□□□□ 0.87
YIPF3-208ENST00000490447 IRX6P78412 446 aaPredicted RBP20.46■□□□□ 0.87
YIPF3-208ENST00000490447 ARHGAP4P98171 946 aa20.46■□□□□ 0.87
YIPF3-208ENST00000490447 CDHR1Q96JP9 859 aa20.46■□□□□ 0.87
YIPF3-208ENST00000490447 TMEM87BQ96K49 555 aa20.46■□□□□ 0.87
YIPF3-208ENST00000490447 YME1L1Q96TA2 773 aa20.46■□□□□ 0.87
YIPF3-208ENST00000490447 C1QTNF1Q9BXJ1 281 aa20.46■□□□□ 0.87
YIPF3-208ENST00000490447 MEIS2O14770 477 aa20.45■□□□□ 0.86
YIPF3-208ENST00000490447 APBB2Q92870 758 aa20.45■□□□□ 0.86
YIPF3-208ENST00000490447 C17orf80Q9BSJ5 609 aa20.45■□□□□ 0.86
YIPF3-208ENST00000490447 SH2B2O14492 632 aaPredicted RBP20.44■□□□□ 0.86
YIPF3-208ENST00000490447 UPP2O95045 317 aa20.44■□□□□ 0.86
YIPF3-208ENST00000490447 PLEKHA8P1O95397 391 aa20.44■□□□□ 0.86
YIPF3-208ENST00000490447 HTRA4P83105 476 aaPredicted RBP20.44■□□□□ 0.86
YIPF3-208ENST00000490447 LMBR1Q8WVP7 490 aa20.44■□□□□ 0.86
YIPF3-208ENST00000490447 GPRASP2Q96D09 838 aa20.44■□□□□ 0.86
YIPF3-208ENST00000490447 SAMD11Q96NU1 681 aa20.44■□□□□ 0.86
YIPF3-208ENST00000490447 PSTPIP2Q9H939 334 aa20.44■□□□□ 0.86
YIPF3-208ENST00000490447 TCF20Q9UGU0 1960 aaKnown RBP20.44■□□□□ 0.86
YIPF3-208ENST00000490447 NRCAMQ92823 1304 aa20.44■□□□□ 0.86
YIPF3-208ENST00000490447 NCOR1O75376 2440 aa20.43■□□□□ 0.86
YIPF3-208ENST00000490447 SPDYE3A6NKU9 549 aa20.43■□□□□ 0.86
YIPF3-208ENST00000490447 RXRAP19793 462 aa20.43■□□□□ 0.86
YIPF3-208ENST00000490447 TCF7P36402 384 aaPredicted RBP20.43■□□□□ 0.86
YIPF3-208ENST00000490447 MKRN4PQ13434 485 aaPredicted RBP20.43■□□□□ 0.86
YIPF3-208ENST00000490447 PTPROQ16827 1216 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms