RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 DBF4BQ8NFT6 615 aa15.45■□□□□ 0.06
LINC00173-204ENST00000489452 GDPD5Q8WTR4 605 aa15.45■□□□□ 0.06
LINC00173-204ENST00000489452 MAP4K1Q92918 833 aa15.45■□□□□ 0.06
LINC00173-204ENST00000489452 TELO2Q9Y4R8 837 aa15.45■□□□□ 0.06
LINC00173-204ENST00000489452 SPATA31C2B4DYI2 1134 aa15.44■□□□□ 0.06
LINC00173-204ENST00000489452 TREHO43280 583 aa15.44■□□□□ 0.06
LINC00173-204ENST00000489452 LPXNO60711 386 aa15.44■□□□□ 0.06
LINC00173-204ENST00000489452 LGR5O75473 907 aa15.44■□□□□ 0.06
LINC00173-204ENST00000489452 GJB5O95377 273 aa15.44■□□□□ 0.06
LINC00173-204ENST00000489452 SMIM10L2AP0DMW4 78 aa15.44■□□□□ 0.06
LINC00173-204ENST00000489452 SMIM10L2BP0DMW5 78 aa15.44■□□□□ 0.06
LINC00173-204ENST00000489452 AAK1Q2M2I8 961 aa15.44■□□□□ 0.06
LINC00173-204ENST00000489452 CASC1Q6TDU7 716 aa15.44■□□□□ 0.06
LINC00173-204ENST00000489452 SERINC5Q86VE9 423 aa15.44■□□□□ 0.06
LINC00173-204ENST00000489452 RAB11FIP4Q86YS3 637 aa15.44■□□□□ 0.06
LINC00173-204ENST00000489452 MB21D2Q8IYB1 491 aaPredicted RBP15.44■□□□□ 0.06
LINC00173-204ENST00000489452 ZNF654Q8IZM8 581 aa15.44■□□□□ 0.06
LINC00173-204ENST00000489452 CMTR1Q8N1G2 835 aaKnown RBP15.44■□□□□ 0.06
LINC00173-204ENST00000489452 CTCFLQ8NI51 663 aaPredicted RBP15.44■□□□□ 0.06
LINC00173-204ENST00000489452 SMARCC2Q8TAQ2 1214 aa15.44■□□□□ 0.06
LINC00173-204ENST00000489452 CUL5Q93034 780 aa15.44■□□□□ 0.06
LINC00173-204ENST00000489452 RRP36Q96EU6 259 aaKnown RBP15.44■□□□□ 0.06
LINC00173-204ENST00000489452 RNPEPQ9H4A4 650 aa15.44■□□□□ 0.06
LINC00173-204ENST00000489452 LY9Q9HBG7 655 aa15.44■□□□□ 0.06
LINC00173-204ENST00000489452 SETD4Q9NVD3 440 aa15.44■□□□□ 0.06
LINC00173-204ENST00000489452 PRC1O43663 620 aa15.43■□□□□ 0.06
LINC00173-204ENST00000489452 CTSHP09668 335 aa15.43■□□□□ 0.06
LINC00173-204ENST00000489452 RXRAP19793 462 aa15.43■□□□□ 0.06
LINC00173-204ENST00000489452 SEMA3FQ13275 785 aa15.43■□□□□ 0.06
LINC00173-204ENST00000489452 NEDD9Q14511 834 aa15.43■□□□□ 0.06
LINC00173-204ENST00000489452 TRIM50Q86XT4 487 aa15.43■□□□□ 0.06
LINC00173-204ENST00000489452 MYOCDQ8IZQ8 938 aa15.43■□□□□ 0.06
LINC00173-204ENST00000489452 CCDC82Q8N4S0 544 aa15.43■□□□□ 0.06
LINC00173-204ENST00000489452 OSBPL7Q9BZF2 842 aa15.43■□□□□ 0.06
LINC00173-204ENST00000489452 TANC1Q9C0D5 1861 aa15.43■□□□□ 0.06
LINC00173-204ENST00000489452 hCG_1642624A0A1W2PR95 340 aa15.42■□□□□ 0.06
LINC00173-204ENST00000489452 LINC01553A4QN01 128 aa15.42■□□□□ 0.06
LINC00173-204ENST00000489452 EFCAB14O75071 495 aa15.42■□□□□ 0.06
LINC00173-204ENST00000489452 UPP2O95045 317 aa15.42■□□□□ 0.06
LINC00173-204ENST00000489452 PLEKHA8P1O95397 391 aa15.42■□□□□ 0.06
LINC00173-204ENST00000489452 COL9A1P20849 921 aa15.42■□□□□ 0.06
LINC00173-204ENST00000489452 ICAM3P32942 547 aa15.42■□□□□ 0.06
LINC00173-204ENST00000489452 KIF5BP33176 963 aa15.42■□□□□ 0.06
LINC00173-204ENST00000489452 COL9A3Q14050 684 aaPredicted RBP15.42■□□□□ 0.06
LINC00173-204ENST00000489452 METTL7BQ6UX53 244 aa15.42■□□□□ 0.06
LINC00173-204ENST00000489452 SRBD1Q8N5C6 995 aaKnown RBP15.42■□□□□ 0.06
LINC00173-204ENST00000489452 HLA-CQ95604 372 aa15.42■□□□□ 0.06
LINC00173-204ENST00000489452 INPP4AQ96PE3 977 aaPredicted RBP15.42■□□□□ 0.06
LINC00173-204ENST00000489452 TGS1Q96RS0 853 aaKnown RBP15.42■□□□□ 0.06
LINC00173-204ENST00000489452 GPR20Q99678 358 aa15.42■□□□□ 0.06
LINC00173-204ENST00000489452 USP26Q9BXU7 913 aa15.42■□□□□ 0.06
LINC00173-204ENST00000489452 SUGCTQ9HAC7 445 aa15.42■□□□□ 0.06
LINC00173-204ENST00000489452 SEC63Q9UGP8 760 aaKnown RBP15.42■□□□□ 0.06
LINC00173-204ENST00000489452 RAPGEFL1Q9UHV5 662 aa15.42■□□□□ 0.06
LINC00173-204ENST00000489452 CCDC69A6NI79 296 aa15.41■□□□□ 0.06
LINC00173-204ENST00000489452 MEIS2O14770 477 aa15.41■□□□□ 0.06
LINC00173-204ENST00000489452 FIBPO43427 364 aa15.41■□□□□ 0.06
LINC00173-204ENST00000489452 STAM2O75886 525 aa15.41■□□□□ 0.06
LINC00173-204ENST00000489452 AMHP03971 560 aa15.41■□□□□ 0.06
LINC00173-204ENST00000489452 MCM5P33992 734 aa15.41■□□□□ 0.06
LINC00173-204ENST00000489452 ERVK-21P61565 698 aa15.41■□□□□ 0.06
LINC00173-204ENST00000489452 SPZ1Q9BXG8 430 aa15.41■□□□□ 0.06
LINC00173-204ENST00000489452 LRRC2Q9BYS8 371 aa15.41■□□□□ 0.06
LINC00173-204ENST00000489452 COG5Q9UP83 839 aa15.41■□□□□ 0.06
LINC00173-204ENST00000489452 EMSYQ7Z589 1322 aa15.41■□□□□ 0.06
LINC00173-204ENST00000489452 DDAH1O94760 285 aa15.4■□□□□ 0.06
LINC00173-204ENST00000489452 GNAT1P11488 350 aa15.4■□□□□ 0.06
LINC00173-204ENST00000489452 GNAQP50148 359 aa15.4■□□□□ 0.06
LINC00173-204ENST00000489452 ARHGAP4P98171 946 aa15.4■□□□□ 0.06
LINC00173-204ENST00000489452 PLEKHG4Q58EX7 1191 aa15.4■□□□□ 0.06
LINC00173-204ENST00000489452 PCNX4Q63HM2 1172 aa15.4■□□□□ 0.06
LINC00173-204ENST00000489452 NLRX1Q86UT6 975 aa15.4■□□□□ 0.06
LINC00173-204ENST00000489452 SEPT8Q92599 483 aa15.4■□□□□ 0.06
LINC00173-204ENST00000489452 MAP3K14Q99558 947 aa15.4■□□□□ 0.06
LINC00173-204ENST00000489452 LZTS2Q9BRK4 669 aa15.4■□□□□ 0.06
LINC00173-204ENST00000489452 C17orf80Q9BSJ5 609 aa15.4■□□□□ 0.06
LINC00173-204ENST00000489452 PSTPIP2Q9H939 334 aa15.4■□□□□ 0.06
LINC00173-204ENST00000489452 PKD2L1Q9P0L9 805 aa15.4■□□□□ 0.06
LINC00173-204ENST00000489452 INSL6Q9Y581 213 aa15.4■□□□□ 0.06
LINC00173-204ENST00000489452 BRWD1Q9NSI6 2320 aa15.4■□□□□ 0.06
LINC00173-204ENST00000489452 FRMPD4Q14CM0 1322 aa15.4■□□□□ 0.06
LINC00173-204ENST00000489452 PTPRSQ13332 1948 aa15.39■□□□□ 0.05
LINC00173-204ENST00000489452 SH2B2O14492 632 aaPredicted RBP15.39■□□□□ 0.05
LINC00173-204ENST00000489452 SLC27A2O14975 620 aa15.39■□□□□ 0.05
LINC00173-204ENST00000489452 ATP9AO75110 1047 aa15.39■□□□□ 0.05
LINC00173-204ENST00000489452 UBE2SQ16763 222 aa15.39■□□□□ 0.05
LINC00173-204ENST00000489452 TMTC2Q8N394 836 aa15.39■□□□□ 0.05
LINC00173-204ENST00000489452 LSG1Q9H089 658 aaKnown RBP15.39■□□□□ 0.05
LINC00173-204ENST00000489452 SMARCA1P28370 1054 aa15.38■□□□□ 0.05
LINC00173-204ENST00000489452 HOXC8P31273 242 aa15.38■□□□□ 0.05
LINC00173-204ENST00000489452 CREB3L3Q68CJ9 461 aa15.38■□□□□ 0.05
LINC00173-204ENST00000489452 XRRA1Q6P2D8 792 aa15.38■□□□□ 0.05
LINC00173-204ENST00000489452 FBXO22Q8NEZ5 403 aa15.38■□□□□ 0.05
LINC00173-204ENST00000489452 TMEM87BQ96K49 555 aa15.38■□□□□ 0.05
LINC00173-204ENST00000489452 SENP7Q9BQF6 1050 aa15.38■□□□□ 0.05
LINC00173-204ENST00000489452 LMCD1Q9NZU5 365 aa15.38■□□□□ 0.05
LINC00173-204ENST00000489452 ZNF215Q9UL58 517 aaPredicted RBP15.38■□□□□ 0.05
LINC00173-204ENST00000489452 PIK3CDO00329 1044 aa15.37■□□□□ 0.05
LINC00173-204ENST00000489452 ITGB5P18084 799 aa15.37■□□□□ 0.05
LINC00173-204ENST00000489452 MARK3P27448 753 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms