RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 PPFIA4O75335 1185 aa13.62□□□□□ -0.23
ACTN4-206ENST00000489451 POLR2MP0CAP2 368 aa13.62□□□□□ -0.23
ACTN4-206ENST00000489451 IRX6P78412 446 aaPredicted RBP13.62□□□□□ -0.23
ACTN4-206ENST00000489451 WTAPQ15007 396 aa13.62□□□□□ -0.23
ACTN4-206ENST00000489451 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.62□□□□□ -0.23
ACTN4-206ENST00000489451 SERINC5Q86VE9 423 aa13.62□□□□□ -0.23
ACTN4-206ENST00000489451 MAP4K1Q92918 833 aa13.62□□□□□ -0.23
ACTN4-206ENST00000489451 INPP4AQ96PE3 977 aaPredicted RBP13.62□□□□□ -0.23
ACTN4-206ENST00000489451 MYL10Q9BUA6 226 aa13.62□□□□□ -0.23
ACTN4-206ENST00000489451 LY9Q9HBG7 655 aa13.62□□□□□ -0.23
ACTN4-206ENST00000489451 PI4K2BG5E9Z4 385 aa13.61□□□□□ -0.23
ACTN4-206ENST00000489451 MEIS2O14770 477 aa13.61□□□□□ -0.23
ACTN4-206ENST00000489451 GJB5O95377 273 aa13.61□□□□□ -0.23
ACTN4-206ENST00000489451 LGALS2P05162 132 aa13.61□□□□□ -0.23
ACTN4-206ENST00000489451 CCND2P30279 289 aa13.61□□□□□ -0.23
ACTN4-206ENST00000489451 ICAM3P32942 547 aa13.61□□□□□ -0.23
ACTN4-206ENST00000489451 KCNJ6P48051 423 aa13.61□□□□□ -0.23
ACTN4-206ENST00000489451 TRDNQ13061 729 aa13.61□□□□□ -0.23
ACTN4-206ENST00000489451 KCNV1Q6PIU1 500 aa13.61□□□□□ -0.23
ACTN4-206ENST00000489451 TRIM50Q86XT4 487 aa13.61□□□□□ -0.23
ACTN4-206ENST00000489451 NCOA7Q8NI08 942 aa13.61□□□□□ -0.23
ACTN4-206ENST00000489451 GDPD5Q8WTR4 605 aa13.61□□□□□ -0.23
ACTN4-206ENST00000489451 PIBF1Q8WXW3 757 aa13.61□□□□□ -0.23
ACTN4-206ENST00000489451 RBM8AQ9Y5S9 174 aaKnown RBP13.61□□□□□ -0.23
ACTN4-206ENST00000489451 ATG2AQ2TAZ0 1938 aa13.6□□□□□ -0.23
ACTN4-206ENST00000489451 ABHD14A-ACY1A0A1B0GW23 586 aa13.6□□□□□ -0.23
ACTN4-206ENST00000489451 LINC01553A4QN01 128 aa13.6□□□□□ -0.23
ACTN4-206ENST00000489451 SPATA31C2B4DYI2 1134 aa13.6□□□□□ -0.23
ACTN4-206ENST00000489451 TREHO43280 583 aa13.6□□□□□ -0.23
ACTN4-206ENST00000489451 PLEKHA8P1O95397 391 aa13.6□□□□□ -0.23
ACTN4-206ENST00000489451 PARNO95453 639 aaKnown RBP13.6□□□□□ -0.23
ACTN4-206ENST00000489451 SMIM10L2AP0DMW4 78 aa13.6□□□□□ -0.23
ACTN4-206ENST00000489451 SMIM10L2BP0DMW5 78 aa13.6□□□□□ -0.23
ACTN4-206ENST00000489451 TGFB3P10600 412 aa13.6□□□□□ -0.23
ACTN4-206ENST00000489451 CSPP1Q1MSJ5 1256 aa13.6□□□□□ -0.23
ACTN4-206ENST00000489451 USP17L6PQ6QN14 398 aa13.6□□□□□ -0.23
ACTN4-206ENST00000489451 RALYLQ86SE5 291 aaKnown RBP13.6□□□□□ -0.23
ACTN4-206ENST00000489451 DBF4BQ8NFT6 615 aa13.6□□□□□ -0.23
ACTN4-206ENST00000489451 FBXL18Q96ME1 805 aa13.6□□□□□ -0.23
ACTN4-206ENST00000489451 GPR20Q99678 358 aa13.6□□□□□ -0.23
ACTN4-206ENST00000489451 SUGCTQ9HAC7 445 aa13.6□□□□□ -0.23
ACTN4-206ENST00000489451 RTEL1Q9NZ71 1219 aa13.6□□□□□ -0.23
ACTN4-206ENST00000489451 BRWD1Q9NSI6 2320 aa13.59□□□□□ -0.23
ACTN4-206ENST00000489451 KIF28PB7ZC32 967 aa13.59□□□□□ -0.23
ACTN4-206ENST00000489451 H3BRB1 525 aa13.59□□□□□ -0.23
ACTN4-206ENST00000489451 LGR5O75473 907 aa13.59□□□□□ -0.23
ACTN4-206ENST00000489451 ADAM17P78536 824 aa13.59□□□□□ -0.23
ACTN4-206ENST00000489451 PLEKHG4Q58EX7 1191 aa13.59□□□□□ -0.23
ACTN4-206ENST00000489451 METTL7BQ6UX53 244 aa13.59□□□□□ -0.23
ACTN4-206ENST00000489451 ZNF654Q8IZM8 581 aa13.59□□□□□ -0.23
ACTN4-206ENST00000489451 SRBD1Q8N5C6 995 aaKnown RBP13.59□□□□□ -0.23
ACTN4-206ENST00000489451 RUFY2Q8WXA3 655 aa13.59□□□□□ -0.23
ACTN4-206ENST00000489451 SPZ1Q9BXG8 430 aa13.59□□□□□ -0.23
ACTN4-206ENST00000489451 LSG1Q9H089 658 aaKnown RBP13.59□□□□□ -0.23
ACTN4-206ENST00000489451 KCNH6Q9H252 994 aa13.59□□□□□ -0.23
ACTN4-206ENST00000489451 RNPEPQ9H4A4 650 aa13.59□□□□□ -0.23
ACTN4-206ENST00000489451 TUT1Q9H6E5 874 aaKnown RBP13.59□□□□□ -0.23
ACTN4-206ENST00000489451 MLXIPQ9HAP2 919 aa13.59□□□□□ -0.23
ACTN4-206ENST00000489451 ERICH2A1L162 156 aa13.58□□□□□ -0.24
ACTN4-206ENST00000489451 C17orf102A2RUQ5 167 aa13.58□□□□□ -0.24
ACTN4-206ENST00000489451 PIK3CDO00329 1044 aa13.58□□□□□ -0.24
ACTN4-206ENST00000489451 SH2B2O14492 632 aaPredicted RBP13.58□□□□□ -0.24
ACTN4-206ENST00000489451 GTPBP6O43824 516 aaPredicted RBP13.58□□□□□ -0.24
ACTN4-206ENST00000489451 ST18O60284 1047 aa13.58□□□□□ -0.24
ACTN4-206ENST00000489451 RXRAP19793 462 aa13.58□□□□□ -0.24
ACTN4-206ENST00000489451 THPOP40225 353 aa13.58□□□□□ -0.24
ACTN4-206ENST00000489451 ERVK-21P61565 698 aa13.58□□□□□ -0.24
ACTN4-206ENST00000489451 HTRA4P83105 476 aaPredicted RBP13.58□□□□□ -0.24
ACTN4-206ENST00000489451 FAM117BQ6P1L5 589 aa13.58□□□□□ -0.24
ACTN4-206ENST00000489451 CYFIP1Q7L576 1253 aa13.58□□□□□ -0.24
ACTN4-206ENST00000489451 CATIPQ7Z7H3 387 aa13.58□□□□□ -0.24
ACTN4-206ENST00000489451 CMTR1Q8N1G2 835 aaKnown RBP13.58□□□□□ -0.24
ACTN4-206ENST00000489451 ATP6V0A1Q93050 837 aa13.58□□□□□ -0.24
ACTN4-206ENST00000489451 MAP3K14Q99558 947 aa13.58□□□□□ -0.24
ACTN4-206ENST00000489451 RAD9AQ99638 391 aa13.58□□□□□ -0.24
ACTN4-206ENST00000489451 MTUS1Q9ULD2 1270 aa13.58□□□□□ -0.24
ACTN4-206ENST00000489451 COL4A6Q14031 1691 aa13.58□□□□□ -0.24
ACTN4-206ENST00000489451 NLRC5Q86WI3 1866 aa13.58□□□□□ -0.24
ACTN4-206ENST00000489451 RSPH10B2B2RC85 870 aa13.57□□□□□ -0.24
ACTN4-206ENST00000489451 FIBPO43427 364 aa13.57□□□□□ -0.24
ACTN4-206ENST00000489451 ATP9AO75110 1047 aa13.57□□□□□ -0.24
ACTN4-206ENST00000489451 DDAH1O94760 285 aa13.57□□□□□ -0.24
ACTN4-206ENST00000489451 RSPH10BP0C881 870 aa13.57□□□□□ -0.24
ACTN4-206ENST00000489451 IKBKEQ14164 716 aa13.57□□□□□ -0.24
ACTN4-206ENST00000489451 PCNX4Q63HM2 1172 aa13.57□□□□□ -0.24
ACTN4-206ENST00000489451 RAB11FIP4Q86YS3 637 aa13.57□□□□□ -0.24
ACTN4-206ENST00000489451 SP7Q8TDD2 431 aaPredicted RBP13.57□□□□□ -0.24
ACTN4-206ENST00000489451 C17orf80Q9BSJ5 609 aa13.57□□□□□ -0.24
ACTN4-206ENST00000489451 SETD4Q9NVD3 440 aa13.57□□□□□ -0.24
ACTN4-206ENST00000489451 COG5Q9UP83 839 aa13.57□□□□□ -0.24
ACTN4-206ENST00000489451 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.56□□□□□ -0.24
ACTN4-206ENST00000489451 hCG_1642624A0A1W2PR95 340 aa13.56□□□□□ -0.24
ACTN4-206ENST00000489451 SLC27A2O14975 620 aa13.56□□□□□ -0.24
ACTN4-206ENST00000489451 PRC1O43663 620 aa13.56□□□□□ -0.24
ACTN4-206ENST00000489451 STAM2O75886 525 aa13.56□□□□□ -0.24
ACTN4-206ENST00000489451 CTSHP09668 335 aa13.56□□□□□ -0.24
ACTN4-206ENST00000489451 KCNA2P16389 499 aa13.56□□□□□ -0.24
ACTN4-206ENST00000489451 TRAF1Q13077 416 aa13.56□□□□□ -0.24
ACTN4-206ENST00000489451 SART3Q15020 963 aaKnown RBP13.56□□□□□ -0.24
ACTN4-206ENST00000489451 SKAP1Q86WV1 359 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms