RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 SMIM10L2BP0DMW5 78 aa22.07■■□□□ 1.12
GGPS1-206ENST00000488594 GNAT1P11488 350 aa22.07■■□□□ 1.12
GGPS1-206ENST00000488594 KCNA5P22460 613 aa22.07■■□□□ 1.12
GGPS1-206ENST00000488594 PUS10Q3MIT2 529 aaKnown RBP22.07■■□□□ 1.12
GGPS1-206ENST00000488594 FCHSD1Q86WN1 690 aa22.07■■□□□ 1.12
GGPS1-206ENST00000488594 RIOX1Q9H6W3 641 aa22.07■■□□□ 1.12
GGPS1-206ENST00000488594 SIP14410 1827 aa22.06■■□□□ 1.12
GGPS1-206ENST00000488594 HOXD11P31277 338 aaPredicted RBP22.06■■□□□ 1.12
GGPS1-206ENST00000488594 NEDD9Q14511 834 aa22.06■■□□□ 1.12
GGPS1-206ENST00000488594 GRM4Q14833 912 aa22.06■■□□□ 1.12
GGPS1-206ENST00000488594 TIGD5Q53EQ6 642 aa22.06■■□□□ 1.12
GGPS1-206ENST00000488594 METTL7BQ6UX53 244 aa22.06■■□□□ 1.12
GGPS1-206ENST00000488594 KHSRPQ92945 711 aaKnown RBP eCLIP22.06■■□□□ 1.122e-7■■□□□ 13.3
GGPS1-206ENST00000488594 YME1L1Q96TA2 773 aa22.06■■□□□ 1.12
GGPS1-206ENST00000488594 PNMA6FA0A0J9YX94 578 aa22.05■■□□□ 1.12
GGPS1-206ENST00000488594 ICAM3P32942 547 aa22.05■■□□□ 1.12
GGPS1-206ENST00000488594 EPC2Q52LR7 807 aa22.05■■□□□ 1.12
GGPS1-206ENST00000488594 CYB5R4Q7L1T6 521 aa22.05■■□□□ 1.12
GGPS1-206ENST00000488594 FAM178BQ8IXR5 827 aa22.05■■□□□ 1.12
GGPS1-206ENST00000488594 GJD3Q8N144 294 aa22.05■■□□□ 1.12
GGPS1-206ENST00000488594 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.05■■□□□ 1.12
GGPS1-206ENST00000488594 TOP1MTQ969P6 601 aa22.05■■□□□ 1.12
GGPS1-206ENST00000488594 INPP4AQ96PE3 977 aaPredicted RBP22.05■■□□□ 1.12
GGPS1-206ENST00000488594 PIGSQ96S52 555 aa22.05■■□□□ 1.12
GGPS1-206ENST00000488594 RNPEPQ9H4A4 650 aa22.05■■□□□ 1.12
GGPS1-206ENST00000488594 CD320Q9NPF0 282 aa22.05■■□□□ 1.12
GGPS1-206ENST00000488594 C11orf16Q9NQ32 467 aa22.05■■□□□ 1.12
GGPS1-206ENST00000488594 BRWD1Q9NSI6 2320 aa22.05■■□□□ 1.12
GGPS1-206ENST00000488594 ERICH2A1L162 156 aa22.04■■□□□ 1.12
GGPS1-206ENST00000488594 TREHO43280 583 aa22.04■■□□□ 1.12
GGPS1-206ENST00000488594 IGHDP01880 384 aa22.04■■□□□ 1.12
GGPS1-206ENST00000488594 APBB2Q92870 758 aa22.04■■□□□ 1.12
GGPS1-206ENST00000488594 GPKOWQ92917 476 aaPredicted RBP eCLIP22.04■■□□□ 1.12
GGPS1-206ENST00000488594 ZNF215Q9UL58 517 aaPredicted RBP22.04■■□□□ 1.12
GGPS1-206ENST00000488594 FRMPD4Q14CM0 1322 aa22.04■■□□□ 1.12
GGPS1-206ENST00000488594 SPATA31C2B4DYI2 1134 aa22.03■■□□□ 1.12
GGPS1-206ENST00000488594 H3BNC9 293 aa22.03■■□□□ 1.12
GGPS1-206ENST00000488594 FIBPO43427 364 aa22.03■■□□□ 1.12
GGPS1-206ENST00000488594 SLC35G1Q2M3R5 365 aa22.03■■□□□ 1.12
GGPS1-206ENST00000488594 PTCRAQ6ISU1 281 aaPredicted RBP22.03■■□□□ 1.12
GGPS1-206ENST00000488594 ZFP91Q96JP5 570 aaPredicted RBP22.03■■□□□ 1.12
GGPS1-206ENST00000488594 U3KPZ7 1027 aaPredicted RBP22.03■■□□□ 1.12
GGPS1-206ENST00000488594 MYH7BA7E2Y1 1941 aa22.03■■□□□ 1.12
GGPS1-206ENST00000488594 IFIT3O14879 490 aaKnown RBP22.02■■□□□ 1.12
GGPS1-206ENST00000488594 SART3Q15020 963 aaKnown RBP22.02■■□□□ 1.12
GGPS1-206ENST00000488594 BANK1Q8NDB2 785 aa22.02■■□□□ 1.12
GGPS1-206ENST00000488594 NEK9Q8TD19 979 aa22.02■■□□□ 1.12
GGPS1-206ENST00000488594 GPR20Q99678 358 aa22.02■■□□□ 1.12
GGPS1-206ENST00000488594 COL4A6Q14031 1691 aa22.02■■□□□ 1.12
GGPS1-206ENST00000488594 FAM86C2PA6NEL3 165 aa22.01■■□□□ 1.11
GGPS1-206ENST00000488594 GRXCR2A6NFK2 248 aa22.01■■□□□ 1.11
GGPS1-206ENST00000488594 CYTH3O43739 400 aa22.01■■□□□ 1.11
GGPS1-206ENST00000488594 CTSHP09668 335 aa22.01■■□□□ 1.11
GGPS1-206ENST00000488594 SSTR3P32745 418 aaPredicted RBP22.01■■□□□ 1.11
GGPS1-206ENST00000488594 MRPS9P82933 396 aaKnown RBP22.01■■□□□ 1.11
GGPS1-206ENST00000488594 TMEM192Q8IY95 271 aa22.01■■□□□ 1.11
GGPS1-206ENST00000488594 IFIH1Q9BYX4 1025 aaKnown RBP22.01■■□□□ 1.11
GGPS1-206ENST00000488594 SETD4Q9NVD3 440 aa22.01■■□□□ 1.11
GGPS1-206ENST00000488594 MICAL3Q7RTP6 2002 aa22■■□□□ 1.11
GGPS1-206ENST00000488594 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22■■□□□ 1.11
GGPS1-206ENST00000488594 UPP2O95045 317 aa22■■□□□ 1.11
GGPS1-206ENST00000488594 ALADP13716 330 aa22■■□□□ 1.11
GGPS1-206ENST00000488594 IL9P15248 144 aa22■■□□□ 1.11
GGPS1-206ENST00000488594 TROAPQ12815 778 aa22■■□□□ 1.11
GGPS1-206ENST00000488594 GPM6BQ13491 265 aa22■■□□□ 1.11
GGPS1-206ENST00000488594 FAM26DQ5JW98 314 aa22■■□□□ 1.11
GGPS1-206ENST00000488594 XRRA1Q6P2D8 792 aa22■■□□□ 1.11
GGPS1-206ENST00000488594 CYFIP1Q7L576 1253 aa22■■□□□ 1.11
GGPS1-206ENST00000488594 RALYLQ86SE5 291 aaKnown RBP22■■□□□ 1.11
GGPS1-206ENST00000488594 SENP7Q9BQF6 1050 aa22■■□□□ 1.11
GGPS1-206ENST00000488594 IL25Q9H293 177 aa22■■□□□ 1.11
GGPS1-206ENST00000488594 BCAS3Q9H6U6 928 aa22■■□□□ 1.11
GGPS1-206ENST00000488594 FAM50BQ9Y247 325 aa22■■□□□ 1.11
GGPS1-206ENST00000488594 PRR33A8MZF0 331 aa21.99■■□□□ 1.11
GGPS1-206ENST00000488594 WTAPQ15007 396 aa21.99■■□□□ 1.11
GGPS1-206ENST00000488594 CATIPQ7Z7H3 387 aa21.99■■□□□ 1.11
GGPS1-206ENST00000488594 GIMAP8Q8ND71 665 aaPredicted RBP21.99■■□□□ 1.11
GGPS1-206ENST00000488594 PABPC5Q96DU9 382 aaKnown RBP21.99■■□□□ 1.11
GGPS1-206ENST00000488594 NSUN3Q9H649 340 aaKnown RBP21.99■■□□□ 1.11
GGPS1-206ENST00000488594 NRCAMQ92823 1304 aa21.99■■□□□ 1.11
GGPS1-206ENST00000488594 NCK2O43639 380 aa21.99■■□□□ 1.11
GGPS1-206ENST00000488594 ADAM17P78536 824 aa21.99■■□□□ 1.11
GGPS1-206ENST00000488594 SEMA3FQ13275 785 aa21.99■■□□□ 1.11
GGPS1-206ENST00000488594 COL19A1Q14993 1142 aa21.99■■□□□ 1.11
GGPS1-206ENST00000488594 PCNX4Q63HM2 1172 aa21.99■■□□□ 1.11
GGPS1-206ENST00000488594 NCOA7Q8NI08 942 aa21.99■■□□□ 1.11
GGPS1-206ENST00000488594 RUFY2Q8WXA3 655 aa21.99■■□□□ 1.11
GGPS1-206ENST00000488594 RTEL1Q9NZ71 1219 aa21.99■■□□□ 1.11
GGPS1-206ENST00000488594 CYP21A2P08686 494 aa21.98■■□□□ 1.11
GGPS1-206ENST00000488594 ARHGAP4P98171 946 aa21.98■■□□□ 1.11
GGPS1-206ENST00000488594 TCEAL5Q5H9L2 206 aa21.98■■□□□ 1.11
GGPS1-206ENST00000488594 TAF2Q6P1X5 1199 aa21.98■■□□□ 1.11
GGPS1-206ENST00000488594 RPAINQ86UA6 219 aa21.98■■□□□ 1.11
GGPS1-206ENST00000488594 TRIM50Q86XT4 487 aa21.98■■□□□ 1.11
GGPS1-206ENST00000488594 SMARCC2Q8TAQ2 1214 aa21.98■■□□□ 1.11
GGPS1-206ENST00000488594 LMBR1Q8WVP7 490 aa21.98■■□□□ 1.11
GGPS1-206ENST00000488594 CUL5Q93034 780 aa21.98■■□□□ 1.11
GGPS1-206ENST00000488594 IL17RAQ96F46 866 aa21.98■■□□□ 1.11
GGPS1-206ENST00000488594 OSBPL7Q9BZF2 842 aa21.98■■□□□ 1.11
GGPS1-206ENST00000488594 RWDD3Q9Y3V2 267 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms